Takifugu flavidus (sansaifugu): 130515302
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Entry
130515302 CDS
T09160
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130515302 (ctcf)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130515302 (ctcf)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130515302 (ctcf)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130515302 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-met
LIM
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
RNA_pol_3_Rpc31
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
130515302
NCBI-ProteinID:
XP_056871457
LinkDB
All DBs
Position
2:complement(18072727..18078111)
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AA seq
761 aa
AA seq
DB search
MEDDVVSMETTQADGKVLPEGGDALIQGAAIAPQAEVTGNMEMMVMDALDPTLLQMKTEV
LDGGGTMTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVEGLQATYVDT
STTNKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQGTREEEEEEEEE
EAAEVEPVVSQQEDPDWSKDPDYQPITTVRKGKKGKKSRLRYGEGDRDMDVSVYDFEEEQ
QEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDER
PHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFK
CSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYIC
HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEMGKKCRYC
DAVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTF
RQKQLLDMHFKRYHDPTFVPTAFVCSKCSKTFTRRNTMLRHAENCMGDVEDENGTPTPKK
GRRGRKRKMQSRKDDDDDDDDDDTEPEQEDMDDEDEMLSEIEVEQAPPVVPIPAPVEPPV
KRKRGRPPKNKPAAAAIIRVEDEVTGEVDDIIVKKEVGADQDDQEICNEEAVEQVVVGGG
KSTIQMEELAQEEAAAQEVPLSEAPPNGDLTPEMILSMMDR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgatgttgtatccatggagaccacccaggctgatggaaaagtcttaccagaa
ggtggggatgctttgatacagggagcagccatagctccacaggcagaggtaactggtaat
atggagatgatggtgatggatgctctggacccaactctgctgcaaatgaagactgaggtg
ctggacggcggcggaacgatgactgttactggtggagatgagggtcagatcataaccctc
caggtggtcaatatggaggaacaggcaggagcggcactgggtcttggtcagcttcagctg
gtccaggttcctgttacaacaacaactgttgaagggcttcaagccacatatgtcgataca
tcaaccactaacaaggatgcagagccagttatttgccatactcttcctttgcctgaagga
tttcaggtggtaaaggtgggtgccaatggtgaggtggagactgttgaacaggaagagctc
caggcagcccatgaagagcttcaaggaacaagggaagaggaggaggaggaggaagaagag
gaggcagcagaggtggagccagttgtgtcccaacaggaagatccagattggagcaaagac
ccagattaccaaccaattactactgtcaggaaagggaagaagggaaaaaagagccgcctg
cgttatggggagggggatcgtgatatggatgtctccgtttatgacttcgaagaagagcaa
caggaaggtttactgtccgaggttaatgcagagaaggttgttggcaacatgaagccacca
aaacccacaaagatcaagaaaaagggcgtgaagaagactttccagtgtgagctttgcagc
tacacctgtccaaggcgttccaacttggatcgacacatgaagagccacacagatgagagg
ccacacaagtgtcacttgtgtggacgagcatttcgaacagtcacgctgctgagaaaccat
cttaacacacacacaggcacccgaccacacaaatgcaccgattgtgacatggcgtttgtc
accagtggcgagttggtccgtcatcgccgatacaagcacacgcatgagaagccattcaag
tgctcaatgtgtgactattccagtgtggaggtaagtaagctgaaaaggcacatccgctct
catacaggagaacgacccttccagtgcagtctgtgcagctatgccagcagagacacttat
aagctgaaaaggcacatgaggacacattcaggtgagaagccatacgagtgctatatctgc
catgcccgttttactcagagtggcaccatgaagatgcatattctgcagaaacatacagag
aatgtggccaagtttcactgtccacactgtgatactgtcatcgctcgcaaaagtgacctt
ggtgttcacctgcgaaagcaacattcatttatcgagatgggaaagaaatgccgctactgt
gacgccgtctttcatgagcgctatgctctcattcagcaccagaagacccacaaaaacgag
aagcgcttcaagtgtgaccagtgcgactattgctgcagacaggagcgccacatgataatg
cacaagcgcacacacacaggggagaaaccatttgcctgcagccagtgtgagaaaacgttc
cgacagaagcagcttctggatatgcacttcaagcggtaccacgaccccacctttgtgccc
accgcctttgtgtgcagcaagtgcagtaagaccttcacccgcaggaacaccatgctgcgt
catgccgagaactgcatgggagatgtggaggacgaaaatggaactccaacccccaaaaaa
ggtcgccggggcaggaagaggaagatgcagtccaggaaggatgatgatgatgacgacgac
gacgacgacacagagcccgagcaggaggacatggatgatgaagatgagatgttgagtgag
attgaagtggaacaggctccgccggttgtcccaatacccgcccctgtggagcccccagtt
aagagaaaacgtggacgtccacccaagaacaagccggcggctgccgccatcatccgcgtg
gaggatgaggtcaccggagaggtggatgacatcattgtgaagaaggaggtcggcgccgac
caagatgaccaagagatctgcaacgaagaggccgtagagcaagtggtggttggtggaggg
aaatcgaccattcagatggaggagttggcccaggaagaggccgcagcacaggaagtgccg
ctctctgaagccccccccaatggagatctaacccctgagatgatactcagcatgatggac
cggtga
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