Takifugu flavidus (sansaifugu): 130515461
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Entry
130515461 CDS
T09160
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130515461 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130515461 (smarca4a)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130515461 (smarca4a)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130515461 (smarca4a)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130515461 (smarca4a)
Chromatin remodeling factors
BAF complex
130515461 (smarca4a)
PBAF complex
130515461 (smarca4a)
GBAF(ncBAF) complex
130515461 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
130515461
NCBI-ProteinID:
XP_056871694
LinkDB
All DBs
Position
18:106610..123612
Genome browser
AA seq
1628 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGIVGPSPGPSPSSAHSMMGPSPVPPGSGHPHPPQA
PTGYSQDPMHQMHKPIDAMNEKGMTDDSRYTQMKGIGIRSSGHSGMGPPPSPMDQHSQGY
PSPVGEHAPSPVPANGPLSVPMMSGGPSGSGSGSLESGGDPNHGIGQLNRSGPAASGGPG
GVGGGTGGPTPFNQNQLHQLRAQIMAYKMLARSQALPEHLQMAVQGKRPMPGMQQQQMPN
MPPITGPGGGPGAGAGPAQGNYNRPHGMVGASIVPPGAAGVPSAMPGQAINGPPKSWSDG
PVVNAATPSNPPQKLIPTQPTGRPSPAPPSVPPAASPVMPPQTHSPGQPALPPPMMLHPK
QNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLPGDLRTKATIELKALR
LLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKR
RQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIEKERMR
RLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKK
TETVEVSSSGATALLGPDGEPLDETSQMSDLPVKVIHVDSGKILTGIEAPKAGQLEAWLE
MNPGYEVAPRSDSEDSGSEEEEEEEDEEEDQPQPSSAMTEEKKKIPDPDSEDVSEVDVQH
IIEHAKQDVDDEYSNASFNKCLNSYYAVAHAVTEKVEKQSTLLVNGQLKQYQIKGLEWLV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWA
PSVVKVSYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRM
KNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRV
LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGYT
GGIVTGPDLYRSSGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRL
DGTTKAEDRGMLLKTFNDPASDYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGYERRAF
LQAILEHEEQDEEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRREEARNPKRKPRLME
EDDLPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGNLED
IEEEVRHKKTSRKRKRDRDHDGGPATPSSSSSRVREKDEEGKKTKKRGRPPAEKLSPNPL
SLTKKMKKIIDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSH
KYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEENESEGDESEEE
EEDVDEGSESESRSVKVKIKLSRKEKGERGSKVHRRRGRGARAKPVVSDDDTEEDQEEEH
SASGSEED
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccggatccccctatgggagggacacctcgtcctggaccctccccaggtcca
ggaccatctccaggtggcatagtagggccaagtccaggtccctctcctagctcggcccac
agcatgatgggcccaagccctgtacctcctggatctggacacccccaccctccgcaggca
ccaacaggatattctcaagatccaatgcaccagatgcacaaacctatcgatgccatgaat
gagaagggaatgactgatgattcccgttatacgcagatgaaaggcataggcattagatcc
agtgggcatagtgggatgggaccacctccaagtccaatggaccaacattcacaaggttac
ccatctcccgtgggagaacatgcccctagccctgtcccagccaacgggcctctgtctgtt
cctatgatgtcaggaggtccctctggctcaggttccgggtctctggaaagtggtggggac
cctaatcatggtataggccaacttaaccgcagtggtcctgcagcttcaggtggtcctggg
ggtgtgggaggtggcacaggtggtcccactccttttaatcagaaccagctgcaccagctc
agggcacagatcatggcttacaagatgttggcacggagccaggcattaccagaacacctg
cagatggctgtgcaagggaagaggcccatgcctgggatgcagcaacagcagatgcctaat
atgccccccattactgggccaggagggggaccaggggcaggggcaggtccagctcagggt
aactacaaccgaccacatggtatggtaggtgccagtattgtgcctcctggagctgcaggt
gttccctcagctatgccaggtcaggctatcaatggaccccctaaatcttggtctgacgga
ccagtggtgaatgctgctaccccatctaacccacctcagaaactgattccaactcaacca
actggcagaccctcacctgctcccccttctgtgcccccagcagcctctccagtgatgccc
cctcagacacattccccaggacagcctgccttgccccctcctatgatgcttcacccgaag
cagaaccgaataaccccaatacaaaagcctcgtggtctggacccagtggagatcttacag
gaaagggaatacaggctacaggctcgaattgctcatcgtatccaggagcttgagaatctt
cctggctctctgcctggtgatttgcgcaccaaagctaccatagagctcaaggccctgagg
ctgcttaactttcagagacagctgcgccaggaggtggtggtttgcatgcgtcgtgacact
gctttggaaactgcccttaacgctaaggcctacaagcgcagtaaacgacagtctttacgt
gaggctcgcattactgagaaattagaaaaacagcagaagatcgaacaggagcgcaagcgt
cgtcaaaaacaccaggaatacctaaacagtattcttcagcatgccaaggactttaaggag
taccatcgctccattacagcaaaaattcagaaagcaaccaaagctgttgctacctatcat
gccaacactgagcgtgagcagaagaaagagaatgagcgcattgagaaggagcgaatgcgg
aggctaatggctgaagatgaagagggctaccgtaaactcattgaccagaagaaagacaag
cgtctggcctatctattgcaacagactgatgaatatgttgccaacctcactgagctggtg
cgagcccacaaagctgcacaagctctcaaagagaagaaaaaaaagaaaaaaaagaagaag
acagaaactgttgaagttagtagtagtggtgctactgctcttctcggacctgatggagag
cctttagatgaaaccagtcaaatgagtgacctgccagtaaaagtcattcatgtggatagt
gggaagatcctgactgggatcgaggcccctaaagctggtcagctagaagcctggctggaa
atgaacccaggttatgaggttgctccacgctcagacagtgaagacagtggttcggaagag
gaggaagaggaggaggatgaagaggaagaccagcctcaaccttcttcagcaatgacagag
gaaaagaaaaagatacctgaccctgacagtgaagatgtgtctgaagtggatgtccagcac
attattgaacatgctaaacaggatgtagatgatgagtacagcaatgcaagtttcaacaaa
tgcctgaattcctactatgctgtggcacatgctgttactgagaaagttgaaaaacagtct
acacttctggtcaatgggcagctcaagcaatatcagattaagggtttagagtggcttgtg
tccctttacaacaacaatttaaatggcattctggctgatgagatgggccttggcaaaacg
atccagaccatcgccctcatcacttacctcatggagtataagcgtctcaacggacctttt
cttatcattgtgccactctccactctttcaaactgggtatatgagtttgataagtgggca
ccatctgttgtcaaagtctcatacaagggttctccagctgctcgtcgagcatttgttcca
atcttgaggagtgggaagttcaatgtgctactgaccacatacgaatacattattaaagat
aaacaagtactagcaaagctccgttggaagtacatgattgtggatgagggccaccgtatg
aagaaccatcactgtaagcttactcaagtcttgaacacacactacctggccccaagacgt
ctgctgcttacaggcactccactacagaataagcttccagaactgtgggctcttttaaat
tttctcctgcccaccattttcaagagctgcagcacatttgagcagtggttcaatgctcca
tttgctatgacgggagaaaaggttgacttgaatgaagaagagaccattttgatcattcga
cgtttacacaaagttctccgtccatttttgctacgtcgactaaaaaaagaagttgaggct
cagctgcctgagaaggtggaatatgtcattaagtgtgacatgtcagccctgcagagagtt
ttgtacagacacatgcaggctaaaggggtgttgctcactgatgggtcagagaaagataag
aagggaaaaggtggtacaaagacactgatgaacactattatgcaactgagaaagatttgc
aaccacccctatatgtttcaacacattgaggaatcattttcagagcatcttgggtatact
ggcggaattgtaacaggcccagatctgtaccgttcttctgggaagtttgagctgcttgat
cgcatcctgcctaaacttagggccaccaaccacaaagtgctacttttctgtcagatgacc
accctcatgaccattatggaagattattttgcctatcgtaacttcaagtacctgcgtctg
gatggaacgactaaggcagaggatcgcggtatgctgttgaagacttttaatgacccagcc
tctgactactttgtgttcctgctcagtaccagagctggaggtcttggcctaaacctacag
tctgccgacacagtagtcatctttgatagtgactggaatcctcatcaggatttacaagct
caggacagagcacatcgcattggtcagcagaatgaggtgcgcgtacttcgtttgtgcaca
gtcaatagcgtggaggagaagatcctggctgctgcaaagtacaaactgaatgtggaccag
aaggtcatccaagctggcatgtttgaccagaagtcttcaggatatgagcgccgggccttt
ttacaggccattctggagcacgaggagcaggatgaggaggaggatgaggtccctgatgat
gagactgtcaatcagatgatagccaggagtgaagaggaatttgagcagtttatgcgcatg
gatctggaccgacgccgcgaggaggcccgcaatcctaagagaaaacctcgtctgatggag
gaggatgatctaccaagctggattcttaaagatgatgccgaagtggaaaggctaacctgc
gaagaggaggaggagaaaatgtttggccgaggttctaggcaacgcaaagaagttgactac
agcgattctctgactgagaaacagtggctgaaggccattgaggagggaaacctggaagac
attgaagaagaagtgcgtcataagaagacttccagaaaacgcaagagggacagagaccat
gatgggggccctgccactcccagctccagcagcagtcgagtgagggagaaggatgaggag
gggaaaaaaaccaagaaacgaggtcgtccacctgctgagaaactctctcccaatcctctg
tccctcaccaagaagatgaagaaaattattgatgctgtcatcaaatacaaggatggtaat
ggtcgacagctgagtgaagtattcatccagctaccatctcgcaaggagctccctgagtac
tatgagctaattcgcaaaccagtagacttcagaaaaatcaaggagaggatccgaagccat
aagtaccgcagcttgaatgacctggaaaaggacgtaatgctgttgtgtcaaaacgctcaa
actttcaacctggagggttctctcatctatgaggactccattgtgctgcagtctgtcttc
acaagtgtgagacagaaaatagaggagaatgagagtgaaggagatgaaagtgaagaggag
gaggaagatgtagatgaaggctcagagtctgaatcccgttcagtgaaggtgaagatcaaa
ctgagccgaaaagaaaaaggcgaacgtggaagtaaagtccatcgaaggaggggccgtggt
gctcgagctaaaccagtggtgagcgatgacgataccgaggaggatcaggaagaggagcat
tcggccagtggcagtgaggaggattaa
DBGET
integrated database retrieval system
