Takifugu flavidus (sansaifugu): 130515504
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Entry
130515504 CDS
T09160
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03420
Nucleotide excision repair
tfs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130515504 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
130515504 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tfs03051
]
130515504 (rad23aa)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130515504 (rad23aa)
Proteasome [BR:
tfs03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
130515504 (rad23aa)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
130515504 (rad23aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
130515504
NCBI-ProteinID:
XP_056871800
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Position
18:2997600..3003070
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AA seq
367 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSCQKLIYAGKILQDDTPIK
EYKIDEKNFVVVMVSKAKPSTAATPPASEPPKPPLQDSGSTSTAAPAATVPATASTPSSA
PTATPAAAPVPSEEAKEEPSAAITEPQQPASSSDGSQGLDASSALVTGAEYEAMLTEIIS
MGYERERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPVQAPAPLPTESPASPPEGE
NPLAFLRNQPQFLHMRQAIQQNPNLLSALLQQLGQENPQLLQQINQHQERFIQMLNEPVG
EGGEMGAAGDEGSSVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLL
NQGLEDD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacacttaaaacgctgcagcagcagactattcagattgagatagatccagaa
caaacggtgaaggccttgaaagagaagattgaagcagaaagaggaaaagacaactttcct
gtatcctgtcagaagttgatatatgctgggaaaatcctccaagatgacacaccaattaaa
gagtacaaaatcgatgagaagaattttgtcgtcgtgatggtgtctaaggccaaaccctca
actgctgccacgccgccagcctcggaaccccccaagccccctttacaggattccggttcg
acatcaacagctgctccagctgccacagtccccgccacagcctcaaccccatcctcggcc
cccaccgcgaccccggcagccgcccccgttccttctgaggaggccaaagaggagccaagt
gctgccatcaccgaaccacaacagccggccagctccagcgatggaagtcaggggctggac
gcttcttccgcgctcgtgacaggagccgagtacgaggccatgctgacggagatcatctcc
atgggctacgagcgagagagagtggtggccgcgctacgggccagtttcaacaacccccac
agagccgtggagtacctgctcaccggtattcccagcagtccagttcaggagagtaatccc
cctgtgcaggccccagcacctctacccacagaatctccagcatctccaccagaaggagag
aaccccctcgcattcctgaggaatcagccccagtttctccacatgaggcaggccatccag
cagaaccccaacctgctgtcagctctgctgcagcagctgggccaggagaacccacagctc
ctgcagcaaatcaatcagcatcaggagcggttcatccagatgttgaacgagcccgtcgga
gagggcggcgagatgggggcagccggcgacgagggctcgtctgtcaactacatccaggtt
acacctcaggagaaggaagccatcgaaaggttaaaagctttaggtttccccgaggcgctg
gtgatccaggcctacttcgcctgcgagaagaacgagaacctggcggccaacttcctcctc
aatcaggggctcgaagacgactga
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