Takifugu flavidus (sansaifugu): 130515697
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Entry
130515697 CDS
T09160
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04140
Autophagy - animal
tfs04142
Lysosome biogenesis
tfs04145
Phagocytosis
tfs04148
Efferocytosis
tfs05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
130515697 (vps18)
04142 Lysosome biogenesis
130515697 (vps18)
04140 Autophagy - animal
130515697 (vps18)
04148 Efferocytosis
130515697 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130515697 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130515697 (vps18)
Membrane trafficking [BR:
tfs04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130515697 (vps18)
Hops complex
130515697 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_Vps41
zf-C3HC4_2
zf-RING_16
zf_RING_Vps8
zf-RING_5
zf-RING_UBOX
zf-C3H2C3
zf-RING_2
zf-ANAPC11
aq_1631
zf-RING_11
LETM1_C
KNOX2
zf-rbx1
DUF1664
DUF4446
zf-C3HC4
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
130515697
NCBI-ProteinID:
XP_056872110
LinkDB
All DBs
Position
19:9703772..9708224
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNRGKSAQRLSRLSTTNVGIPHTGFVNVRLEEEKPIFNKQRVDFTPPEK
INHLVVCNNQLCMNLGKDSLLRIDLTKPDQRNQIELGRKDDSTVHRLFLDPTGSHLLIGL
STRECLYLNRNTQKVRSLSRWRGHLIECVGWNKQFGNETNTGPILVGTSQGVIFEAEISA
TEASLFNTNPDQYFRQVHSLEEDGNPAPVCCLEVERGLENKDYIIATTRKRLFQFVGKEV
EGSEQQCFSSIFSQNQDQLPSFQEFPANMGYSEITFYTSKLRTLPNAFAWMMGNGVLYGQ
LDFVRPNSLLSDVQVWEYTSDIDISANKPISIVLTQFHFLLLLHDRVKAICTLNGEVVYE
DVFPDKAGTLKKMIKDPVGGLVWIYTEKAVFRYHIQREARDVWQMYMSMNRFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLDSAKCYALTQKYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQNERTQITLLVTWLSELYLNQLGQLESDGNTIIFQETRKEFHDFLSNPKHKECLF
NNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALEVLSKHCDPKLFYK
FSPVLMQHIPKKVVDAWVQMGKRLDPKKLIPALMNYSQMGSSQQINETIRYIEFCVYEMT
VTEEAIHNYLLSLYARYKPDSLLWYLEQAGTQASEIHYDLKYALRLCSEHGYLQACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEELQKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIDELKQEMEEATESAKRIRQDI
QEMRNKYGVVDSQEKCASCDFPLLSRPFYLFLCGHMFHSDCLFQEVTPQLSSYKQTRLEE
LQRKLAATAQTSKSRHRPAPKEEGDTSSIGKGSAVTSREQIKSDIDDIVASECVYCGELM
IKSIDKPFIDPEKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgattctggacgagtacgaggactcgcagaaccgagggaaaagcgctcagcgg
ctaagtcgcttgtcgaccacaaacgtcgggataccgcacacaggtttcgtcaatgttaga
ctcgaagaagagaaacccatattcaacaagcagagggtcgatttcactccaccagagaag
ataaatcatcttgtcgtctgcaataatcaactctgcatgaatctaggaaaggactccctg
ctgaggatcgacctgaccaaaccagatcaacgaaaccagattgagttgggaagaaaagac
gacagcacagtccacagactcttccttgaccccactggctcacatctgctcatcggcttg
agcacaagagagtgcctgtatctcaacaggaacacacagaaggtgcgtagtctgtcccgc
tggagaggccacctcattgagtgcgtgggctggaacaagcagtttggcaacgagaccaac
acaggacccatcctggttggaaccagtcagggcgtcatctttgaagctgagatctctgca
actgaggccagcctgttcaacaccaatccagatcagtacttcagacaggtccactcgctc
gaggaggatggtaatcctgcgccagtctgctgcctggaggtggagcgcggcctggagaac
aaggactacatcattgccaccacccgcaaacgcctgttccagttcgtggggaaggaggtg
gaggggtccgaacagcagtgctttagctccatcttcagccagaaccaggaccagctgccc
agtttccaggagtttccagccaacatgggttacagcgagatcacattttacacctcaaag
cttcgcaccctcccaaatgcgttcgcgtggatgatgggaaacggagttctctatggtcaa
ctagactttgtcaggcccaactctctgttgagcgacgtgcaggtgtgggagtacacctcg
gacattgacattagtgccaacaagcccatctccatcgtgctgacgcagttccactttctg
ctgctgctccacgatcgcgtcaaagccatctgcactctaaacggggaggtggtgtacgag
gatgtgttcccagacaaagctggcactctgaagaagatgatcaaggatccggttggtggg
ctggtctggatctacaccgagaaggcagtcttccgctaccacatccagcgtgaggccagg
gacgtttggcagatgtacatgagcatgaatcggttcgatctggccaaagagtactgccgc
gaccggcccgagtgcatggacatggtgctggccaaggaggccgagcactgcttccagaac
aagagataccttgatagtgctaaatgctatgcgctaacccagaagtattttgaggagata
gcgctaaagttcatcgaagccaaacaagaggaagcactgaaggagttcttactgaagaaa
ctaaacaatctgaaacagaacgagagaactcagatcaccctgctggtcacctggctctcc
gagctctacctgaatcagctgggccagctggagagcgacggaaacaccatcatcttccag
gagacccgcaaagagtttcacgacttcctcagcaaccccaagcacaaggagtgcctcttc
aacaaccgcagcaccatctacgacctgctggccagccacggcaacgtggacgacatggtc
tacttctcggtcgtcatgcaggactacgagagggtgatatcgcactactgccagcacgac
gactacagcgccgccctggaggtgctgtccaagcactgcgatccgaagctcttctacaag
ttctctcccgtcctcatgcagcacattcccaaaaaagtagtcgacgcctgggttcagatg
ggcaagcggctggacccaaagaagctgatcccggctctgatgaactacagccagatgggc
agcagccagcagatcaacgaaaccatccgctacatagaattctgcgtgtacgagatgacc
gtgaccgaggaggccatccacaactacctgctgtccctctatgccagatacaagccagac
tctctgttgtggtacctggaacaagcgggcacgcaggcctcagagatccactatgacttg
aagtacgccctcaggctttgctctgaacatggatacctgcaggcctgcgtgctggtctac
aggataatggagctgtacgaagaggccgtggaccttgctttacaggtggatgtggacttg
gctaaatcttgcgcggacctgcccgaggatgacgaggagcttcagaagaagttgtggctg
aagatcgctcggcatgtggtgcaggaggagaaagatgtgaagaaggcaatgaactgcctg
tccagctgcaacctgctcaaaattgaagacatcctccctttcttcccagacttcgtgacc
attgaccattttaaggaggcaatctgtagctctctggaggagtacaatcaacacatcgat
gagctgaaacaggaaatggaggaggccacagagagcgccaaacgcatcagacaagacatc
caagaaatgaggaacaaatatggcgtggtggattcccaggaaaagtgtgcctcttgtgac
ttcccattactcagcaggcccttttatctgttcctgtgcggacacatgttccactccgac
tgcctctttcaggaagtgaccccccagctgtcgtcttataagcagactcgtctggaggag
ctgcagaggaagttggccgctaccgctcagacctcaaagtcccggcaccgtccagccccc
aaggaagaaggagacacctccagcatagggaagggcagcgcggtcaccagccgcgagcag
atcaaatcagacattgacgacatcgtggcgtctgaatgcgtctactgcggcgaactgatg
atcaagtccatcgacaaaccctttattgacccggagaagtttgaggaagagaaatccagc
tggctatga
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integrated database retrieval system
