Takifugu flavidus (sansaifugu): 130515702
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Entry
130515702 CDS
T09160
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130515702 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfs01002
]
130515702 (capn3b)
Enzymes [BR:
tfs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
130515702 (capn3b)
Peptidases and inhibitors [BR:
tfs01002
]
Cysteine peptidases
Family C2: calpain family
130515702 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
130515702
NCBI-ProteinID:
XP_056872120
LinkDB
All DBs
Position
19:complement(5347251..5355542)
Genome browser
AA seq
766 aa
AA seq
DB search
MGEERAKVPVVEETSVRVLCLSEASYESDDKSDYPPAGTNSIYSAILSRNEAVKDAKRLK
TFLELRDKYVKKKVIFEDPLFPANDSSLFYSHKPPMKIEWKRPSEICENPQFIIDGANRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTQNYAGIFHFQFWRYGEWVDVLVD
DRLPTCRGQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFF
ELSEPPRELYSIMRKALERGSLMGCSIDVSSVSELETRTEQGLVKGHAYSIIGLTECDEV
ANKAKVRLIRLRNPWGIVLWKGPWCPNSKEWSTISIADQENLKKQTVESSEFWMSFDDFQ
RNFTKLEMCNLTPDALQGEERHSWMVSVNQGRWVRGSSAGGCRNYPDTFWTNPQYRMKLY
EEDDDSEGSQETCTVVVALMQKGRRMQRQQGNRFLTVGFSIYKVPLEMCGQTQHLQKDFF
LYTASTAKCKTYINLREVTERFHLPPGEYVIIPTTFEPHQEGEFILRVFSEKQSTSEEAE
TTIEQTQQDKKKKEKPIVFVSDRARANKEIEHDGIRGEKRKPKRKLLEPKEETEEEKQFR
VIFKKISGEDMQICANELKGIMKNVLDKHSEIKTEGFSLETCRSMIALMDTDGTGKLNLQ
EFKHLWRKIKAWQLIFRRYAKDKTCSISSFEMRNAVNDAGFHLNNQLYDIIAMRYADEHL
NINFDGYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagagcgagccaaagttcccgtcgtggaagagaccagcgtgagggtgctctgc
ctgagcgaagcctcctacgagtccgatgacaagagcgattaccctccggcgggaaccaac
tccatctactcagccatcctgagcagaaatgaggccgtcaaggacgccaagcgcctcaag
accttcctggagctgcgagacaaatacgtgaagaagaaggtgatctttgaagaccctctg
ttccctgcgaacgactcctcgctcttctacagccacaagcctcccatgaagattgaatgg
aagcgtccgtcggaaatctgtgaaaacccccagttcatcattgatggagccaacaggacg
gacatctgtcagggggaattgggggactgctggctgctggccgccatcgcctgcctgacc
gtcaacgaaaagctgctgtacagagtgatccccccggaccagagcttcacgcaaaactac
gccggcatctttcatttccagttctggcgttatggggaatgggtcgacgtgctggtggat
gatcggctccccacctgccgcggccagctggtttttaccaaatccttcagaaagaacgag
ttctggagcgctctcttggagaaagcttatgcaaagttgcacggctcttatgaggcactg
aaaggaggaaacactttggaggccatggaggatttcacgggaggagtgaccgagttcttt
gagctttctgagccaccgagagagctttacagcatcatgaggaaggccctggaacgaggc
tcgctgatgggctgctccatagatgtctcttcagtgagtgaactggagacccggactgag
caggggctggttaaaggtcacgcctactccattattggtttaactgagtgcgacgaggtg
gcaaataaggcaaaggttcgcctgatccgcctgcgtaatccctggggtattgtgctgtgg
aagggcccgtggtgtcccaattccaaggaatggtcgaccatttccattgcagatcaggaa
aatctaaagaaacagactgtggagtccagcgagttctggatgtcgtttgatgattttcag
aggaatttcacaaagttggagatgtgcaacctgacgcccgacgcgctgcagggtgaggag
aggcacagctggatggtgtccgtcaaccaggggcgctgggtgaggggcagctctgccgga
ggctgcagaaactacccagacacgttctggaccaaccctcagtatcgtatgaaactctat
gaggaggacgacgactcggagggcagccaggagacctgcactgttgtcgtggctctgatg
cagaagggccgaaggatgcagcgccagcaggggaatagattcctcaccgttggcttttcc
atctacaaggtgcccctggagatgtgcggacagactcagcatctgcagaaagacttcttc
ctctacaccgcctctaccgctaaatgcaaaacctacattaacctgcgggaggtaacggag
cgtttccacctgcctccgggagaatacgtcatcattcccacgacctttgaaccccatcaa
gagggggagtttattctcagggttttctcggagaagcagagcacatctgaggaagccgag
accacaatcgaacagacacagcaagacaagaaaaagaaagaaaagcctatagtgtttgtg
tcagacagagcacgagccaacaaagagatcgagcatgacggcattcggggagagaagagg
aagcctaagcgtaaactgctggaacccaaggaggaaactgaagaggagaaacagttcaga
gtcattttcaaaaagatttctggcgaagacatgcagatctgcgccaacgagctcaagggc
atcatgaagaacgtcctggacaaacacagtgaaataaagaccgaaggcttcagcctggag
acgtgccggagcatgatcgccctgatggacaccgacggcaccggaaagctgaacctgcag
gagtttaaacacctgtggaggaagatcaaggcctggcagctgatcttccgtcgttacgcc
aaagacaaaacctgctccatcagcagttttgagatgaggaacgctgtcaatgatgcaggg
tttcacctcaacaaccagctgtacgacatcatagcgatgcgatacgcggacgagcatctg
aacatcaactttgacggctacatctgctgcttcgtgaggctggagggcatgttcagggcc
ttcaatgctttcgataaggatggagacggaatcatcaagctcaacgtgctggagtggctc
cagctgaccatgtattcttaa
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