Takifugu flavidus (sansaifugu): 130515864
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Entry
130515864 CDS
T09160
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130515864 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130515864 (hbs1l)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130515864 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
130515864
NCBI-ProteinID:
XP_056872389
LinkDB
All DBs
Position
19:complement(8750850..8764349)
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AA seq
688 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVDDDYCISPATANQFIYSRRERQAPKEEPLEEEEY
EDEPMPMSPTVSHNLLDPLDQAKLYSCLDHMRTVLGDAIPDSVLTQAAMRCGFDPQRALD
VVLSEDSATTPGSRCTSKDAGRVAYEPAPLPQRPKPETAAERASSKMECDVVPKVARMTV
SGKKQTMGFDVPSAGEHGSGRGGSPETPAVALASEAAPKQQETPSKGANGEDSSTVPTPG
RSGKARQAINIKAELEKRQGTKTLLNLVVIGHVDAGKSTLMGHLLYLLGHVNKRTMHKYE
QESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETSSKVVTLMDAPGHRDFIPNMI
TGAAQADVALLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQQD
RFQDITSKLGSFLKQAGFKESDVSYIPSSGLSGENLTTRSSVPQLTSWYSGPSLLEQIDA
FKPPQRSTDKPFRLCVSDVFKDQGSGFCVTGKVEAGYVQTGDRILVLPPNETCTVKGITL
HDEPLDWAAAGDHVSLTVTGMDIIKMNVGCMFCDPKEPIKVCTRFRARILLFNIEVPVTQ
GFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLTKGMNAIVEIQTQRPVSLELY
KDYKELGRFMLRYGGSTIAAGVVTEIKG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacacagaaatgtccgtggttacaactatgatgaagactttgaagatgatgac
atgtatggacagtctgtggatgatgactactgtatatcaccagcaacagcaaatcagttc
atctactcgcgtagagagaggcaagcaccaaaagaggagccattagaagaggaagaatat
gaagatgagccaatgcccatgtcccccactgtcagtcacaatcttcttgacccgcttgat
caagccaagctctattcctgtctggatcacatgcggaccgtgctgggagatgccatccca
gactctgtgctgacccaggcagccatgagatgtgggttcgacccgcagcgagcgctcgac
gtcgtcctgtcggaagacagcgccacgaccccgggctccagatgtaccagcaaagatgca
ggaagagttgcttatgagccagcaccgctgccacaacgacctaaaccagagacggcggct
gagagagcttccagtaaaatggagtgtgacgtggtccccaaagtggcccgcatgaccgtc
tcgggcaagaagcagaccatgggcttcgacgttccgagcgcaggggagcacgggagcggc
cgcggggggagccccgagacccccgctgtggccctggcctccgaggctgcacccaaacag
caggagaccccgtccaaaggggcaaacggggaggactcctccacggttcccacaccgggc
cgctccgggaaggcccggcaggccatcaacatcaaggctgagctggagaagaggcagggc
accaaaaccctgttgaatttggtcgttataggtcacgtggatgcaggtaaaagcaccctg
atgggccacctcctctacctgctgggccacgtcaacaagcgcaccatgcacaagtacgag
caggagtcgaagaaggccgggaaggcctccttcgcctacgcttgggtcttggatgaaacc
ggggaggaacgggacaggggtgtgactatggacgtaggcatgaccaagtttgagaccagc
tctaaagttgtgacactgatggatgctccaggacacagagatttcatcccaaacatgatc
acaggagctgcacaggctgatgtggcgctgctggtggtggacgccagccggggggaattc
gaggccggttttgaggcgggcggccagaccagagagcacgctctgctggtgcgctcgctc
ggcgtcacgcagctggctgtggccgtcaacaagatggaccaggtgaactggcaacaagat
cgattccaagacatcacctccaaactgggcagtttcctcaagcaggccgggttcaaggag
tccgacgtgtcctacatcccctccagtggcctctcaggagagaatctgaccaccaggagc
tcagtgccacagctcacctcctggtattctggtcccagcctgctggagcagatcgatgcc
tttaagcctcctcagaggtctacagacaagcccttcagactctgtgtctcagatgtgttc
aaagaccagggctcaggcttctgtgtaactgggaaggttgaggctggttatgttcagact
ggtgacaggatactggtgttgcctcccaatgaaacatgcaccgtcaaaggtataaccctg
catgatgaacctctggactgggcggcagcaggagaccacgttagcctgacggtcaccggc
atggacatcatcaagatgaatgtgggctgcatgttctgcgatcccaaggagcccattaaa
gtctgcacaagattcagagccaggatccttctcttcaatatagaggttcctgtcacacag
ggcttccctgtgttgttgcattaccagaccgtcagcgagcccgccaccatcaggaaactc
atcagtgttttacacaaaagcagtggtgaagtcctcaagaagaaaccaaagtgtttgacc
aagggcatgaacgctatcgtggagattcagacacagaggcctgtttcattagagctgtac
aaggactacaaagaactcgggcgcttcatgctgcgatatgggggctccaccatcgctgcg
ggggttgtcaccgagatcaaaggatga
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integrated database retrieval system
