Takifugu flavidus (sansaifugu): 130515974
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Entry
130515974 CDS
T09160
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs00100
Steroid biosynthesis
tfs01100
Metabolic pathways
Module
tfs_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
130515974 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tfs01006
]
130515974 (fdft1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
130515974 (fdft1)
Prenyltransferases [BR:
tfs01006
]
Terpene biosynthesis
Squalene/phytoene synthase
130515974 (fdft1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
GST_C_8
HAUS4
Motif
Other DBs
NCBI-GeneID:
130515974
NCBI-ProteinID:
XP_056872662
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All DBs
Position
19:complement(7993806..7998885)
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AA seq
457 aa
AA seq
DB search
MAGACCKCTATLSVFKRSLSVAPRGCSSAPRYQLAGWRLGERGLQEASRASSAVRPAGFY
RHTASVCLSCQESMSESLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV
EDDMSIPLNTKVPMLNDFHTYLYQHDWCFTKSQEKDRQVLEDFPTISLEFRNLAQDYRDV
ISEICHRMGVGMAEFLEKKVGSMKEWDLYCHYVAGLVGVGLSKLFSASKLEDPEVGQDTE
LANSMGLFLQKTNIIRDYLEDTQEGRAFWPQEAWSQFAGRLEDFAQPQKLDSALSCLNLL
VTDALQHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSSCYNNPMVFQGVVKIRKGQAV
TLMMDATNMGAVQTIIAQYSQEIFQKVSLTDPSRDKTLHILTVIQEKSTLSQSSLPSRTH
HLSPMYLSAAMLLAALSWQYLNTTAAQAQGTGDMQGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcttgttgcaagtgtacggccacgctgtccgtgttcaagcgctctctctcg
gtggcgccgcggggctgcagctccgctcctcggtaccagcttgcgggctggaggctcggg
gagaggggcctacaggaggcctcccgagcctccagcgcagtcagacccgccggcttctac
cgacacacggcctctgtttgtctgtcctgtcaggagtccatgagcgagagcctgcggacc
tgctacgtgtacctaaaccagacgagccggagttttgcagcggtgatccaggcgctggac
ggggagctgagacacgcagtttgtattttctacctggtgctgcgagcactggacacggtg
gaggacgacatgagcatccctctgaacacgaaggtcccgatgctgaacgatttccacacg
tacctgtaccagcacgactggtgcttcacaaagagccaggagaaggaccggcaagttctg
gaggactttcccacgatatcactggaattcagaaacctcgctcaagattacagagacgtc
atctctgaaatatgccaccgtatgggagtaggaatggcggaattcctggaaaagaaagtg
ggatccatgaaggagtgggacctgtattgtcactacgtggcagggctggtcggggtcggg
ctgtctaagctgttctccgcgtctaagctggaggacccagaggtggggcaggacaccgag
ctggccaactctatgggcctcttcctccagaagaccaacatcatccgagactacctggag
gacacgcaggagggacgtgccttctggcctcaggaggcctggagtcagtttgccggtcgt
ctggaggactttgcccagccgcagaagctggactcggctctctcctgtctcaacctgctc
gtcactgacgcgctgcagcacgtcccggatgttattgcctacctgtcgcgcctgcgcaac
cagagcgtcttcaacttctgtgctattccacaggtgatggcgatagcgacactgtcgtcg
tgctacaacaaccccatggtgttccagggagtcgtgaaaatccgaaagggacaggctgtc
acgctcatgatggacgccaccaacatgggagccgtgcagaccatcattgctcagtacagt
caggagatattccaaaaggtctccctgactgacccgtcccgggacaaaaccctccacatc
ctgactgtcatccaggagaagtccacgttgtcgcagtccagcctgccctccaggacccac
cacctgtcccccatgtacctgtctgccgccatgctgctcgccgccctcagttggcagtac
ctgaacaccaccgcagcgcaggctcaaggcaccggggacatgcagggacagtga
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