KEGG   Takifugu flavidus (sansaifugu): 130516174
Entry
130516174         CDS       T09160                                 
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
  KO
K10653  tripartite motif-containing protein 54
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130516174 (trim54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfs04121]
    130516174 (trim54)
Ubiquitin system [BR:tfs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    130516174 (trim54)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-C3HC4_4 zf-B_box RING_XB3-XBAT31 zf-RING_5 zf-RING_6 zf-C3HC4_3 zf-RING_2 TRIM_CC DUF5799 Sina_RING Cep57_MT_bd CoiA_N Zn_ribbon_FGT1_2 Costars LRIM1_dimer
Other DBs
NCBI-GeneID: 130516174
NCBI-ProteinID: XP_056873010
LinkDB
Position
19:3113552..3121450
AA seq 361 aa
MNFALGCKPPSAGSSGPGAARGAAMENLEKQLVCPVCLEMFSKPVVILPCQHNLCRKCAS
DIFQEANPLGHARGSSGVVVSGSRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDLYRQQ
ESSRLLAMKPEQPQQLMCEDHDDERINIYCLSCQTPTCSMCKVFGKHKDCEVAPLDSVYT
RKKVELSDEIAMLVASNDHIQGHISQMEEMCHAIEENGKQQREQLAGHFDRLVATLEERK
LELVGLISKEQDHKLKRARSLIQRYGDELEAAVALVESAIRSMEEPHMSAFIQNANIILE
RMAATSRTSSTERPELGYESMNHFTIDASDAAAALMNIDFCSGVADDEETEEESEVDFTS
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaactttgctctgggctgcaagcctccatcagcaggcagttccggccccggcgccgcc
cgaggagccgcgatggaaaacctggagaagcagctggtgtgtccggtgtgcctggagatg
ttctccaaacctgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccagc
gacatcttccaggaggccaatcccctgggtcacgctcgtggttcctccggtgttgtggtc
agtggaagccgctttcgatgtccctcctgccgtcacgaagtggtgctggaccgccacggc
atctatggtctgcagaggaacctgctggtggagaacatcatagatctgtacagacagcag
gagtcatccagacttctggccatgaagccggaacagccgcagcagctgatgtgtgaagac
cacgatgacgagaggatcaacatctactgcctctcctgccagacgccgacctgctccatg
tgcaaagtgttcggaaaacacaaggactgcgaggtggctccgctggacagcgtctacacc
cggaagaaggtggagctgagcgacgagatcgccatgctggtcgccagtaacgaccacatc
caggggcacatctcccagatggaagagatgtgccacgccatagaggagaatggaaagcag
cagcgagaacagctggccggccattttgaccgcctggtggcgaccctggaggagcggaag
ctggagctggtggggctcatcagcaaggagcaggaccacaaactcaaacgagctcgctcg
ctcatccagcgctacggcgacgagctggaggccgccgtagcgctggtggagtcggccatt
cggtccatggaggagccgcacatgtctgcctttattcagaacgccaacatcattctggaa
aggatggcggccacgtccagaacctccagcacagaacgtccagaacttggctacgagagc
atgaaccatttcaccatcgacgccagcgatgcggcggcggcgctgatgaacatcgacttc
tgctccggtgtcgcagatgatgaggaaactgaggaggagtcagaggtcgacttcacatcc
ttctag

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