Takifugu flavidus (sansaifugu): 130516391
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Entry
130516391 CDS
T09160
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130516391 (taf1b)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
130516391 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
130516391
NCBI-ProteinID:
XP_056873422
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All DBs
Position
19:complement(2094077..2098172)
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AA seq
566 aa
AA seq
DB search
MDAQDTAGYSEACAQCSAVDWGVSDEGRFYCKTCHNVIERTQDVQDTSFTPGSSRISTFG
TGRKSSRTECGREWMICEGFQFILRNQANALLRLGVGDYFKDHVLCEMWRLYLQKSRQAY
THKPVRISHYKLHTDSSSAEMSSRSFVTESDGETSGSNQVVSTDHSCIVSACSNSDEDVS
HLSARRGRSQSLMSMSKTLALVHLALVWSREALTLSDLLRLVNKGHVPYVNAYEQLPDEM
NIKGKDALIFRVESVPSHTAIHREAETLLSFLQLPAFPPVTGQTLLHPVRLSLRYLIDSN
LPVELHPLLCRLIERTGMMDPKLHTCGCSAHPAVPLYDVQTAALIIITMKLLFGLNDQTE
WDLSSQTIEHQHAGDQFSFRRWYRLLQGVLIRAQNRQKVDVVRKQWKGDKPLHLDKKDRR
VVMKKKRTAEQLRVCYEKLSSQRAAVQHVSPCSFRFCWGDQYEADGPSFHQKKLGGILSL
PLDTDTLRNSWYWHPALKRCKPRTCRSHYEEVEATLPQTFKWFLKLFCFLLDIKPACLYE
EVLKVERRLFTNHTGTLNDRDFQGAS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacaagacacggcaggatactcagaagcctgtgctcagtgttcggcggtggat
tggggagtttcagacgagggtcggttctactgcaagacctgccacaatgtcatcgagaga
acccaagatgtgcaggacaccagcttcactcctggctccagcaggatctctacatttggc
acaggaagaaaaagttcgagaacagaatgtggccgagagtggatgatctgtgaagggttc
cagttcatcctgaggaaccaggctaatgcgcttctcagactaggagttggtgactacttc
aaggatcatgtgttatgtgagatgtggagactttatttgcagaaaagtcgacaggcctac
acccacaaaccagttagaatctcccactataaactgcacactgactcaagctcagcagaa
atgtcttcgaggtcatttgtcactgaatctgacggagagacttctggatctaaccaagtt
gtttccacagaccactcttgtattgtgtcggcatgctccaactctgatgaagacgtcagt
cacctgtcagctcgtagagggcggagccagagtttgatgagcatgagcaagactcttgct
ctggtccacttggctctggtctggagccgtgaagctctgactctcagtgacctcctcagg
ttggtgaataaaggtcacgttccatatgtgaatgcatatgagcaacttccagatgagatg
aacataaagggcaaagacgcattaatcttcagagtggagagcgtgccgtcccacactgcc
attcatagggaggcagagactctgctttcattccttcaacttcctgcttttcctccagtc
actggccagactctgctgcatcccgtcaggctcagtctgcggtacctgattgacagcaat
ttgccagttgagctccatccattgctgtgcaggctgatcgagcgcactggaatgatggat
ccaaaacttcatacatgtggctgctcagctcatcctgctgtcccgctctatgatgtgcag
accgccgccctcatcatcatcaccatgaagctcctgtttgggctcaatgaccaaactgag
tgggatttatccagtcaaacgattgaacaccaacatgcaggagaccagttcagttttagg
aggtggtaccggctgctgcaaggggttcttatccgagctcaaaacagacaaaaggttgat
gttgtgaggaaacagtggaaaggggacaaacctctgcaccttgacaagaaggacaggcgt
gttgtgatgaagaaaaagagaacagctgagcagctacgagtgtgttatgagaagctgtct
tctcagcgagcagcagtccagcacgtcagtccgtgcagtttcaggttctgctggggggat
cagtatgaagcagatggtcccagtttccaccagaagaagttgggtggaatcttgtcccta
cctctagacaccgacactctcaggaactcttggtactggcacccagcactgaaacgttgc
aaacccaggacctgtcggagtcactatgaggaggtggaggccacactgccacaaaccttc
aagtggttccttaagctcttctgcttcctgttggacatcaaaccagcatgtctgtatgaa
gaagtgctgaaggtggaacgccgcctgttcaccaaccacacaggaaccttgaatgaccgg
gactttcagggagcctcttag
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