Takifugu flavidus (sansaifugu): 130516839
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Entry
130516839 CDS
T09160
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130516839 (chd1)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130516839 (chd1)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130516839 (chd1)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
130516839 (chd1)
SLIK complex
130516839 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
130516839
NCBI-ProteinID:
XP_056874126
LinkDB
All DBs
Position
20:complement(10873255..10889637)
Genome browser
AA seq
1782 aa
AA seq
DB search
MAGCSEDESLSNSSGESSNSDDESGSGSASGSGSGSSSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKSKEKMEPSNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQKQRPTSKS
GSDEESSSSDESDSSSSSRKRRNSRSSDSGSGSDSDSSSGSDSSAEDNSDETASDYEPGH
KIKSRKPPTKMNFRNGKKSSSQKKKAQKGSSSEDECENKVVSSGPRRQATVNISYKEDEE
LKTDSDDLVEVLGEDVPQLEEDEFETVERVMDSRIGRKRAIGSATTVYAVEADGDPNADF
SPSKEAGDVQYLIKWKNWAHIHNTWETEETLKMQNVKGMKKLDNYKKKDQEKKKWLKAAS
PEDIEYLNCQDELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLSYSECSWEDGA
LIAKKFQKCIDDYMSRHQSKTIPSRDCKVLKQRPRFVPMKKQPSFIDDGLELRDYQLDGL
NWMAHSWCKGNSCILADEMGLGKTIQTICFLNYMFNEHQLYGPFLLVVPLSTLTSWQREI
QLWAPQMNVVVYLGDISSRNMIRTHEWIHVHSKRMKFNILLTTYEILLKDKSFLGSVNWA
FIGVDEAHRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKFHSWE
LFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWI
LTRNYKALSKGVKGSTSGFLNIMMELKKCCNHCYLIRLPEDDLNKTEALQQLVRSSGKLV
LLDKLLIRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEMRKQALDHFN
AEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIYR
LVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNKEELSAILKF
GAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFTMMEEEE
IDSERSQRSWDDIIPEEQRRRLEEEERQKELEEIYLLPRMRNCAKQISFNASEGRQSRSR
RYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGEPLERLDAIAR
DAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKTSGGKRGKVKGPTFRISGVQVNAK
LVISHEQELAPLHKAIPADPEERKKYMIPCHSKAAHFDIDWGKEDDSSLLIGIYEYGYGS
WEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKHLARKEAHKQTGTANSR
KRKPRSKASKTVKPAKTDDVIKSASSDPSSDKRSDDDEDDDDDDDDIEEKVTVKTLSRRS
RENVVVKEEDEDEGEPKQEELSSSGEREFKRRETRKEGKKDKNDSWDSKEGKELKERKEL
KPVEAAQRQEDGLEKVEAKAEVRERVKKASDVPIHITASGEPVPVSEEPEELDQKTFSEC
KEKMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITGCLQKYSNPDEIKLWRKN
LWIFVSKFTEFDARKLHKLYKHAIKKRQESAQALEQNTRIMNTYNYKHTDNERLKDSIQQ
DESSRDSCSSDRHQSSGRYYDSSKDRHSSESLRKSSAAGADSRKRPYSAFSNGKDHRERD
HYRPDSRDRDRFYSDGKHRKLEEYSSSRDHRLDTKDHSHSEHRSTYRYHSDWQSEPRAAG
GGPRSPLDQRSPYDSRSPLGHRSPFDSDHKSTPEQIWNSRKT
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggctggatgcagcgaggatgagagcctgagcaacagcagtggggaatcaagtaactct
gatgatgaatctggttctggatcagcttcggggtccgggtccggttcgagctcctcttcc
agctcgtccagcagcagcagccagtcaggaagcagcgattcaggtagcggttcggactct
ggcagtcagtccgattctgacactgaaaaatccaaggagaagatggaaccatcaaataag
tcaaatattgatggagccgagttttggaagtctaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacaacagcttcagcagcagaagcagaggccaacttccaaaagt
ggatctgatgaggagtcttccagcagtgatgaatcggactcatcgagcagttccagaaag
aggagaaattcccgttcctctgactctgggtctggctctgactctgacagtagttctgga
tctgactcttcagctgaagacaacagcgatgaaacggcctcggattatgaaccgggccac
aaaatcaagagtagaaagcctccaaccaagatgaattttcgcaacgggaagaaaagcagc
agccagaagaaaaaagctcagaagggttcttcttctgaggacgagtgtgaaaacaaggtg
gtgtcgtcgggcccccggcggcaggccacagtcaacatcagctacaaggaggatgaggag
ctgaagacggactcggacgatttggtggaagttctgggggaagatgtcccccagctggag
gaggacgagtttgaaacggtggagagagtcatggacagcaggataggaaggaaaagagca
ataggaagtgcaaccactgtatatgccgtggaggctgatggagatcccaacgctgatttc
agtcccagcaaggaggcaggtgacgtccagtacctgatcaagtggaagaactgggcccac
attcacaacacctgggagacagaggagacgctcaagatgcaaaacgtcaaaggcatgaag
aaactggacaattacaagaagaaagaccaggagaagaagaaatggttaaaggcagcttct
ccagaggacatcgagtacttgaactgtcaggacgaattaatggacgacctgcactcgcag
tatcagctcgtagagcgaatcatcggccattctaaccagaagtctgctgcggggtaccct
gactacctgtgtaagtggcaggggctgtcatactcggagtgcagctgggaagatggagct
ttgattgccaagaagtttcagaaatgcattgatgactacatgagtagacaccagtccaag
accattccatccagagactgtaaggttttgaaacagaggcccaggtttgtgcccatgaag
aagcagccgtcgtttatagatgatggactggagctgcgagactaccagctggacggtttg
aactggatggctcactcctggtgcaaaggcaacagttgcatcctggctgatgagatgggt
ttagggaagaccatccagaccatctgcttcctcaactacatgttcaatgagcaccagctc
tatgggcccttcttactagtggttcctctctctacactgacgtcctggcaaagagaaatc
cagctgtgggcccctcagatgaacgttgtagtttatcttggagatattagcagcagaaat
atgatccggacccatgaatggattcatgttcacagcaagagaatgaaatttaacatcctc
ctcacaacatatgagattcttctcaaagacaagtcattcctgggcagtgtaaactgggcc
ttcatcggtgtagatgaggcacacagactgaagaatgatgattcgctcctctacaagacc
atgatggagttcaagtccaaccacaggctgcttatcacaggaacacccctgcagaactct
ctaaaggagctgtggtcccttctgcacttcatcatgcctgacaagtttcactcttgggag
ctgtttgaggaggagcacggtaaaggaagagattcaggctacaccagtctacacaaagag
ctggagcctttcctgctccggagagtcaagaaggacgtggagaaatctcttcctgccaaa
gtggagcagattctacgcgtggagatgagcgctatccagaaacaatattacaaatggatc
ctgaccaggaactacaaggctctgagtaaaggtgtcaaaggcagcacatcagggttcctg
aacatcatgatggagctgaagaagtgctgtaaccactgttaccttatcagactcccagag
gacgacttaaacaaaactgaagccctccagcaactggtgcgcagcagtgggaagctggtt
ctgctggacaagttgctgatccgtttgaaggagcgtggccacagagttctcatcttctct
caaatggttcggatgctggatatccttgctgactatctgaggagccgacagttcctcttt
cagaggttagatggatccatcaagggggagatgagaaagcaggcattggaccattttaat
gctgagggctcagaggacttctgctttctgctatcaacacgggcgggtggtctcggtatc
aacctggcatccgctgacacagtagtcatctttgactcggactggaacccccagaatgat
ctgcaagctcaggccagagctcacaggatcggacagaaaagacaggtgaacatctaccgt
ctggtgacaaaaggctcagtagaggaggacattatcgagagagccaagaagaaaatggtg
ttggaccaccttgtcattcagaggatggacacgactggaaaaactgtacttcatactggt
gctgctccatccagttcagcaccgtttaacaaggaggaactgtccgccatcctcaagttt
ggtgcagaggagcttttcaaggagccagagggggaggaacaggagccacaggaaatggat
attgacgagatcctaaaacgagcagagaccagagagaatgatcccggaccctcaacagtg
ggagaagaattactgtcccagttcaaggtggccaacttcaccatgatggaagaggaagaa
atcgactccgagcgcagccagagaagttgggatgacatcattcctgaggagcagaggaga
cgtctggaggaggaggagaggcagaaggagctggaggaaatctatttgttgccacggatg
cggaactgtgccaaacagatcagctttaacgccagtgagggccgccagagtagaagcagg
aggtactctggctccgacagcgattccccatcagaccgcaagaggccaaagaaacgagga
cgtcctcgcacgattccacgggagaacatcaagggcttcagtgatgctgaaattcggaga
tttgtgaagagttataaaaagtttggagaaccactggaaaggctggacgccatcgctcgt
gatgcagaactggtagataaatctgaacacgacttgaagcggctggcagagacggttcac
aacggctgcgtgagaacgttgcgggagaacccctgtggaccagagaagacctcaggagga
aaaagggggaaggtgaaagggccgacattcaggatctctggtgtccaggtcaacgctaaa
cttgtgatctctcacgagcaagaactggctccactgcacaaggccatccccgcggaccct
gaggagaggaagaagtacatgattccgtgtcactcaaaggcagcacactttgacattgac
tggggaaaggaggacgactccagcctcttgatagggatttatgagtatggctatggcagc
tgggagatgatcaaaatggaccctgacctcaatctgacgcataagctcttgccagatgat
cctgataagaagcctcaggcaaaacagttacagaccagagccgactacctcatcaagctg
ctgagtaagcacctggccaggaaagaagcgcataaacaaacggggacggccaactcacgg
aaacgaaagccaagaagcaaagctagcaaaactgtgaagccagctaagacggatgatgtg
ataaagagcgcgtcctcagatccttcatcagacaagaggtctgacgatgacgaggacgac
gatgacgatgatgacgacattgaggagaaggtgacggtgaagacgctgagcagacgaagt
cgcgaaaacgtggtggtgaaagaggaagacgaagatgaaggagagcccaaacaagaagag
ctctcctcatctggagagagggaattcaaacggagagagacgagaaaggaaggcaaaaag
gataagaacgacagctgggacagtaaagagggcaaagagctcaaagaaaggaaagagctg
aagccagtggaggcggcacagaggcaggaggacggcctggagaaggtggaagcaaaggca
gaagtacgagaacgagtgaagaaagcctccgatgtgcccattcatataacagcgagtgga
gagcctgtcccagtgtctgaggagcctgaggaactggatcagaagaccttcagcgagtgc
aaagagaagatgagaccagtgaaagctgccctgaagcagctggaccggccagagaagggc
ctgtcggagcgggagcagctggagcacaccagacagtgcctcatcaagatcggagaccac
atcaccggctgtctgcagaagtattccaacccagacgagatcaaactctggagaaaaaac
ctgtggatatttgtctctaaattcaccgagtttgatgccaggaagctacacaagctctac
aaacacgccatcaagaagcgtcaggagagtgctcaggccctggagcagaacaccaggatc
atgaacacctacaactacaaacacacagacaacgagagactgaaggacagcatccagcaa
gacgagagcagcagagacagctgcagctccgacagacaccagtcttccggtcgatactac
gacagcagtaaagacagacacagctccgagtccctcaggaagagttctgcagcaggagca
gactccaggaaaagaccctactctgccttcagcaacggcaaggaccaccgggagagagac
cactacaggccagacagcagggacagagacaggttctacagtgatggtaaacacagaaag
ctggaagagtacagctccagcagggaccatcgactagacacgaaggatcattcccattca
gagcaccgctctacctaccgataccactcagactggcaaagtgagcccagagctgcgggc
ggtgggccgcgctcccccctggaccaacgctcgccctatgactcgcgctcccccctcgga
catcgctcaccttttgattcagaccacaagagcacaccagaacaaatatggaatagccgg
aaaacataa
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integrated database retrieval system
