Takifugu flavidus (sansaifugu): 130516860
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Entry
130516860 CDS
T09160
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130516860 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_5
Ank_4
Ank_3
EGF_3
EGF_DL_JAG
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
130516860
NCBI-ProteinID:
XP_056874161
LinkDB
All DBs
Position
20:complement(5260387..5281123)
Genome browser
AA seq
2479 aa
AA seq
DB search
MYRFFVKLTFLIPAIVISQGLKCSLPTESCLNGGRCEATTNGNGECRCPSDFVGNRCQYP
SPCSPSPCRNGGECRAVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCDLT
TLTVYRCRCPPGWSGKTCQIANPCASNPCANGGQCSAFDSTFICTCPPTFHGQTCKQDVN
ECAQTPSPCLNGGICVNEVGSYHCRCPAEYTGRHCETPYMPCSPSPCQNGGTCVQKGDTT
YDCTCLPGFTGAHCEHNIDDCPGHGCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCINTKGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCHINIDECASQPCLNNGKCVDKINSFHCECQKGFSGNLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYTGQHCEIDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICVCPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEPGYTGAMCNVNIDDCAINPCHNGGTCVDGINSFTCLCPEGYNDATCLSQVDEC
RSNPCIHGRCHDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
VGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAICHNTMGGYQCLCQPGYS
GLKCEIDTDDCKPNPCSNGGLCHDGVNTYTCTCPPGFRGGRCEQDINECESNPCKNGANC
TDCVNSYTCTCPLGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGTCLDSYGTYKCTCPLGYTGVNCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKRQGVDVAHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGATCTDYLGGYSCECVPGYHGINCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPFTDPMTNEPKCFNNGKCVDRIGGYQCVCLPGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYNSRSCGSLNCRNGGTCVSGHLGPRCLCPATFTG
PECQTPTDSLCISNPCYNGGTCQITPDVPFFRCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNRSSAFLRELSSVLHTNVVFRRDAKGEPMVFPYY
GNEQDLVKHNVLKRSADGWPDWASMPADVLGQVKESMSAIVNPRKRRELDPVQVKGSVVY
LEIDNRQCYQQSTECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTSPGSELYPMYV
VFLGLAALGFICLGVLVSRKRKREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLRPMKN
SDINLMDDNQNEWDDEDPDCRRLRLEEQAMLDLCDHGDPRKWTQQHLDAADLRIACIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIITDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHSAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVDGMVEELINCHADVNATDDSGKSALHWASAVNN
VDAAVVLLKNGANKDMQDNKEETPLFLAAREGSFQTAKVLLEHFANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHNTPLSTSSLSPPLASPNDYLCNLKPSMSVKKVRKL
TSVGKGGKDGGKDGRNKKKKSLDGKGNLLDTSAVLSPVESLESPHGYLSDVASPPMTSPF
QQSPPISLNHLQGTGDLLGMNTGKDVGCMSFDHNLPRLSHLPVSSPHSQGAASIGGSRGG
QCDWVSRLHPGVGQQGNFGQAPTMSHNIMSALHGVSTATLSQIMGYQNLQTSHLGSPAHM
IQQAHSQQLQHQNTSSNPTAGPPLNQSCPNIELNGSEMQQNNSSGHVMSIHTVMPQETQI
LGTQFLTPPSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGI
SSPPTSIHSQMNLIPDQFK
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactaacgtttctgatcccagcaatcgtcatctcacaaggt
ctaaaatgctccctgcccactgaatcttgcctgaatggaggaagatgtgaagccaccacg
aatggaaatggagagtgcaggtgtcccagtgacttcgtaggaaatcgttgccagtatccg
agcccatgcagcccttcaccatgccgtaatggtggcgaatgccgagctgtttcccatggc
aacacgtttgatttccgctgcgtgtgccgcctggggttcactgaccggctgtgcctgact
cccaccaaccatgcctgcatgagctccccatgtcgcaatggaggaacgtgtgacctcact
accctcactgtctaccgctgtcgctgcccacctgggtggtcaggtaaaacgtgccaaatt
gccaacccatgtgcttctaatccatgcgcaaatggtggccagtgctctgcctttgattct
accttcatctgcacctgcccacccaccttccatggccagacctgcaagcaagatgtcaac
gagtgcgcacagaccccctccccttgcctcaatggcggcatttgtgtcaacgaggtgggc
tcgtaccattgcagatgccctgcggagtacactggccgacactgtgagacaccatacatg
ccatgcagcccctctccatgccaaaatggaggcacctgtgttcagaagggagacaccacc
tacgactgcacctgtcttccaggcttcacaggtgcgcactgcgagcacaatatcgacgac
tgtccaggccacggctgccagaatggtggagtttgtgtggacggagtgaacacctacaac
tgccagtgcccgcctcattatacaggtcaatactgcactgaaaatgtggacgagtgtgag
ctgatgcccaacgcgtgtcaaaatggaggaacgtgccacgatacacacggcagctatcac
tgcgtctgtgtcaatgggtggaccggtgacgactgcagcgagaacatcgacgactgtgcc
agcgcagcttgctaccatggcgccacctgccatgatcgcgtggcctctttcttctgcgag
tgtcctcatgggcgcacaggattgctgtgccacctggatgacgcgtgcattagtaatcca
tgccaaaagggctccaactgtgacaccaaccctgtcaatggcaaagcgatctgcacctgc
cccccaggctacaccgggtcagcctgtaatttggacattgacgagtgctcccttggggcc
aatccatgtgagcacggtggtcgctgtatcaacacaaaaggctcgttccagtgcaagtgt
ctgcaagggtatgaaggaccccgatgtgagatggacgtcaatgaatgcatgtctaaccct
tgccacaacgatgccacctgcctggatcagatcggcggcttccactgcatctgtatgcca
gggtacgagggtgtgttttgccacatcaacatagatgagtgtgccagtcagccttgtcta
aacaatggaaagtgtgtcgacaagatcaactccttccactgcgagtgccagaaaggcttt
tcagggaatctttgtcaggtggacattgatgagtgtgccagcaccccctgcaaaaatgga
gctaagtgtaccgacggtccgaacaagtacacttgtgaatgtgctgaaggttacacagga
caacactgtgaaattgacatcaatgagtgctattctgacccttgtcactatggtacctgt
aaggatggcctggcctctttcacctgctactgccgtcctggctacacgggccgtctctgt
gaaactaacatcaatgagtgtctcagtcagccctgcaagaacggtggcacttgtcaagac
agggaaaacacttatatttgcgtctgccctaaagggactgcaggattcaactgtgaggtg
aacctggatgactgtaagagcaaaccctgtgactacgggaggtgcatcgacaagatcaat
ggctatgaatgtgcatgcgaacctggttatacaggtgcaatgtgtaacgtcaacatcgat
gactgtgccatcaacccttgtcacaacggaggtacttgcgtcgatggaatcaacagcttc
acctgcttgtgtccagagggctacaatgacgccacctgtttgtctcaggtggatgagtgt
aggagcaacccatgcatccacggccgatgccacgatctcatcaacggctataaatgtacg
tgcgactctggctggagtggcccgaactgtgacatcaataacaacgaatgtgagtccaac
ccttgcatgaatggtgggacctgcaaggacatgaccagtgggtaccactgcacgtgcaga
gtcggcttcaccgggcctaactgccaaactaacatcaatgaatgtgcttccaacccctgc
ctcaaccagggcacctgcatcgatgatgtggctggatataagtgcaactgcttgctgccc
tatactggtgaaaactgtgagaccttacttgcaccctgcagccccagaccctgtaagaat
ggaggagtgtgtaaagaggctgaagactaccagagcttttcctgtatctgccccgaagga
tggcaaggtcaaacatgtgagattgacatcaatgagtgtgtgaaaagcccatgtcgtaat
ggtgccatttgtcataacacaatgggtggttaccagtgcctgtgccagccaggttactct
ggcctcaagtgtgagattgacactgatgactgcaaacccaatccatgtagtaatggtggt
ctgtgccatgatggcgtcaacacgtatacctgcacctgtccgcccgggtttcgtggcggc
agatgcgaacaggacataaatgagtgtgagagtaatccctgcaagaacggggccaactgc
accgactgtgtcaacagctacacctgcacatgtccgctgggcttcagtggcataaactgc
gagatcaacaccaacgactgcaccgacagctcttgcttcaacggtggcacctgtgtggac
ggcatcaacgccttcacctgcctctgtctgcctggattcactggcagctactgccagtat
gacatcaacgagtgtgactccaagccctgcctcaatggcggcacatgtcttgacagttac
ggaacatataagtgcacgtgtcctctcggctacactggagttaactgtcagaatctcgta
cgctggtgtgattcttccccatgcaagaatggaggctcgtgctggcagcagggagcatca
tacacctgccagtgccagactggctggacaggtctctattgtgacatccccagtgtctcc
tgtgaagttgcagccaaacggcaaggtgttgacgtggctcacctgtgcagaaactctggc
cagtgtctggatgcaggaaacacacactattgtcgatgccaggctggatacactggcagc
tactgccaggaacaagtggatgagtgttcacctaatccgtgccaaaatggagccacatgt
accgattatctaggaggctacagttgtgagtgtgtccctgggtaccatggaataaactgc
tctaaagagatcaatgagtgtcagtcccaaccctgtcagaacggaggcacctgcatcgat
ctgatcaacacctacaagtgctcctgtccaagaggaacgcaaggtgtccactgtgagatt
aatttggatgattgcacccccttcactgacccaatgaccaatgagcccaagtgcttcaac
aatggcaaatgtgtggaccgcatcggaggttaccaatgtgtgtgtctgcccggctacgtg
ggtgaacgctgtgagggagacgtcaacgagtgcctgtcagacccctgtgaccccagaggg
tcctacaactgcattcagctcaccaacagctacagatgtgaatgccgcactggttacaca
ggtcaacgttgcgataaggtgtttgacggctgtaaagggcgtccctgcaggaatggtgga
acatgtgccgtcgctagcaacacaccacatggtttcatctgcaaatgtccacctggcttc
actggctcttcgtgtgaatataattcacgctcttgtggaagcctgaactgcagaaatggt
ggcacctgtgtgtcaggccaccttggtccacgctgtctatgtccagcaaccttcactgga
cctgaatgccagacccctaccgacagcctctgcatatctaacccctgttacaatggcggc
acgtgccagatcaccccagacgtgccatttttccgctgcagctgccccagtaatttcaat
ggcctcctgtgccacatcctcgattactccttcgtgggaggatttggacgggacatcacc
ccacctccagaagtggaggtgagctgtgagattcctcagtgtgacgagtgggcggggaac
catatctgtgactcgctgtgcaacaaccacgcctgtggctgggatggaggagactgctca
ctcaactttgatgatccttggcaaaactgctcggcggccctgcagtgctggcgctacttc
aacgatggcaagtgtgatggccagtgtaacagccctgggtgtctctatgatggctttgat
tgtcagggacaggaaggacaatgcaacccactttatgaccagtactgtaaggaccactac
gctgatggtcactgtgaccagggctgcaataacgcagaatgtgaatgggatggcctggac
tgtgcaaacaacatgccagagaagcttgcagatgggcacttagtcctagtggtccatatt
ccccctgaacagcttaaaaaccgctcttcagctttcctcagagagctcagcagtgttctc
cacactaatgtggtgtttcgccgtgatgccaaaggagagccgatggtttttccctattac
ggaaatgagcaggacctcgtcaaacataacgtgctgaagcgctccgcagacggctggcct
gactgggcttcaatgccagcggatgttttgggccaagtgaaggaaagcatgtctgccata
gttaacccccggaaacgcagagagctggatcctgtgcaggtcaaagggtcagtggtgtat
ctggagattgataaccgtcagtgttaccagcagtctacagagtgcttccaaagtgccaca
gatgtcgctgctttccttggtgctctggcctccagtggaaatctgaatgttccctacatt
gaagctgtcactagtgtaagacctactagcccgggttcggagctctatcccatgtacgtt
gtttttctgggcttggctgctttgggatttatctgcctcggcgttctggtgtcccgcaag
agaaagcgagagcacgggcagctctggtttcccgaaggattcaaggtttcagagcccagc
aaaaagaagcgcagagagccgcttggagaagattctgttggactgaggcccatgaaaaac
tcagacataaatctcatggatgacaatcagaatgaatgggatgatgaagatccagactgc
aggcgcttaaggcttgaagagcaggccatgttggatttgtgtgaccacggcgacccaagg
aaatggacccagcagcatctggatgcagctgatctacgcatcgcctgtatcgctcctact
cctcctcagggagagatagagaatgactgcatggacgtcaatgtcagaggtccagatggt
ttcactccactgatgattgcctcctgcagcggtggaggcctggagactggaaacagtgaa
gaagaagaagatccctcagcagaaattatcaccgacttcatttatcagggagccaacctc
cataaccaaactgaccgcaccggtgagaccgccctccacctggccgctcggtacgcgcgc
tctgatgctgccaaacgcctcctggagtccagcgctgatgctaacgttcaggacaacatg
ggccgcactcctcttcattctgcggtggctgcagatgctcagggagtgttccagattttg
atccgaaatcgtgccaccgatctcgatgcccgcatgcatgatggaacgacgccgttgatt
ttggcagctcgtttggctgtcgacggcatggttgaagagcttatcaactgccatgctgac
gttaatgccactgatgactctggaaaatctgctcttcactgggcctcagcagtaaacaat
gtggacgcagctgttgtgttgcttaaaaatggtgcaaacaaagacatgcaagacaacaag
gaggaaacaccactcttccttgctgcccgtgaaggcagctttcagacagccaaggtcctt
ctggagcattttgccaatcgtgagatcacagaccatcttgaccagctacccagagatatt
gcccaggaacgcatgcaccatgacattgtccgcctcctggatgagtacaatgtggttcgg
agtcctggacttcacaacactcccttaagtacctccagtctttccccacctcttgcctcc
cccaatgactacctttgcaatctgaagccttccatgtcggtcaagaaggttcgtaaactg
acttctgttggtaaaggtgggaaggacggtggcaaagatggcagaaacaaaaagaaaaag
tcactggatgggaagggaaacttgctggacacgtcagccgtcctctccccagtagagtcc
cttgagtcaccgcatgggtacctgtctgatgtggcctctcctcccatgacatcacccttc
cagcagtccccacccatctccctcaatcacctacaaggcactggggaccttctggggatg
aacaccggaaaggatgtaggctgtatgtcttttgaccataacctgccccgcctctcccac
ctgcctgtatccagcccacacagtcagggtgcagcatctataggtggcagcagagggggc
cagtgtgactgggtctccaggttgcacccaggtgtgggccagcagggcaacttcggccag
gctccgaccatgtcccataacattatgagtgcactgcacggtgtcagcactgccaccctc
tctcagatcatgggctaccagaatttgcagaccagccacctcggctcacctgcgcacatg
atccagcaggcacactcacagcagctccagcatcaaaacaccagctccaaccccacagct
gggccacctctcaatcagagctgtcctaatattgagctcaatggctccgaaatgcagcaa
aacaacagctcgggccacgtgatgtctatccacactgtgatgccacaggaaacgcaaata
ctcggcacccagttcctcacacctccctcccagcacagctattctggacccatggacaac
acaccaaaccaccagctccaggtgccggaccatccttttttaacgccttctcctgggtcc
cctgaccagtggtccagctcatccccacattccaacatgtcagattggtcagaaggcatt
tccagcccacctacgagtatccactcacagatgaatttgatcccagaccagtttaaatag
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integrated database retrieval system
