KEGG   Takifugu flavidus (sansaifugu): 130516980
Entry
130516980         CDS       T09160                                 
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    130516980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfs04131]
    130516980
Membrane trafficking [BR:tfs04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    130516980
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML WDR55 EIF3I ASA1 CFAP251_N Beta-prop_WDR41 Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_ACSF4 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_Aladin DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR19_1st PAC11 KNTC1_N WDR90_beta-prop_4th WDR72_alpha-sol Beta-prop_TEP1_C Tricorn_2nd Beta-prop_DCAF4 PD40
Other DBs
NCBI-GeneID: 130516980
NCBI-ProteinID: XP_056874441
LinkDB
Position
20:11466767..11514330
AA seq 1490 aa
MSGNSLVLPIVLWGRTAPTHCISTLLVMDDFSTIITGCHDGQICLWDMTSDLEICPRAML
FGHTASITCLSKASACSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFT
IGTQREGRLLSNGLYPEILVMDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAM
SVTGILKVWIITAEVSRMQDLDPVFEEESKPVYCQGCQSISFCTFTQRSLLVICSKYWRV
FDAADYSLLCSVPSDNDQSWTGGEFIAADKVIIWTEDGCSYVYKLPPSEHFRSHVGKTKE
SLVPPLIYKIAERSDKELLICPPVTRFFFGRREPFHKLLIQGDSAGQLSLWSIPDSTPQQ
PLSAAAELQVSSTISLQEAFDKLTPVSAGIIDQLSVLPSKEEPIKVTASVYIPSQGRLVC
GREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCVLYPYQISPRYDQR
SLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIVPPENCSTRVQHCVCSVASDHSVG
LLSLRERKCIMLASRHLFPIHVVKWRPADDYLVVGCSDGSVYVWQMDTGALDRCVMGITA
VEILNACDELAPATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAADNADK
GNLPKYSHNALVVQAMKTNLTDPDMHVLFFDVEAVIIQLLTEEAQRPNPTLVSPETLQKS
QAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLLEYNLT
MDTAKLFMSCLHAWGLNEQLDNICLERLGMLRPHCPISFGLISRGGHMSLMLPTFKESLL
RQLSLATGLKLTLSDIVGKGTYGVSRAVTTQHLLSVISLANTLMGMTNATFVGEHMKKAP
ARPPRPGGTPESPRRMQATPPQPSNPALQAQIKQAAVAATANTGTVTTAAGPPGAPGAPP
QGAPGSPSPGPALNVPSVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLE
VREAAQALLLAELRRIGVSGRKDTIDMWASYLPQYVDTVSSPGSTSEAPSPAPPPPDAQP
IETKASEEEMDVVDDDITTGCLSSLPPNAKKISNSYEERRKQATAIVLLGVIGAEFGAEI
EPPKGSGRARAGGQAPEGFGLTSGGSSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRT
AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLNPPADSARSSRHALS
LIATARPPAFITTIAREVHRYNAAQANSQSQQNIHTTTLARAKTEILRVIDILIEKMPGD
VVDLLVEVMDIIMYCIEGSLVKKKGLQECFPAICKFYMVGYCDRSHRIAVGARQGSVALY
DVRTGKCQNIHGHKGPITAVSFAPDGRYLATYSNADSHISFWQMNTSLLGSIGMLNSAPQ
LRCIKTYQVPPVQPASPGSQNHLKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4473 nt   +upstreamnt  +downstreamnt
atgtcagggaacagcttggttctacccatagtgctatggggacgcactgctccgacacac
tgtatcagcaccctgctggtcatggatgactttagcaccatcattactggttgccatgat
ggacagatctgtctctgggacatgacctctgatctggagatttgtcccagggccatgttg
tttggtcatactgcctccattacctgtctgtctaaagccagtgcatgcagtgacaagcag
tatatagtcagtgcatcagagagtggagagatgtgtttatgggatgtgaatgatggacgc
tgtatcgagtttacaaagctggcctgtacccacactggcatacagttctatcagttcact
attggcactcagagggagggacggctgctttctaatggactctacccagaaatccttgta
atggatgccaccagtctggaggtcctgtactcactggtgtctaagatctctcctgactgg
atcagctccatgagcatcatcagatctcaccgaacacaagaggacacagtggtggcgatg
tcagtgacaggtattctaaaggtctggatcatcacggctgaggtcagcagaatgcaggac
ttggacccagtgtttgaagaagaatccaaacctgtctactgtcagggttgtcagagcatt
tccttctgcaccttcactcagaggagcctgttggtcatttgttccaagtactggagggtg
tttgatgctgcagattactcgctgctctgctcagttcccagtgacaatgaccagagctgg
acaggtggagagtttatcgctgcagacaaagttatcatttggactgaagatggctgcagt
tatgtctataagctgccccccagtgaacatttccgtagtcatgttgggaaaactaaagaa
agcttagttcctccactgatctacaaaattgccgaacgttcagataaagagctcctgatc
tgtcctcccgtgacgcgctttttctttggacgccgtgagccttttcacaagctgctcatc
cagggggactcggcgggccaactgtccctgtggagcatccctgatagcaccccccagcag
ccgctgtcggccgctgcagaactacaggtgtcctccactatcagtctgcaggaggctttt
gataagttgacccctgtatctgctggaatcatcgaccagctcagcgtcctgccttcaaag
gaagaaccaatcaaggtgacagccagtgtttacatcccctctcaaggtcgactggtgtgt
gggcgagaggacggcagcatcatcctggtccctgctacacagacggccattgtccagcta
ctacagggagaacatatgctcaggagaggttggccaccccatcggaccctgcggggtcac
cggaacaaggtgacgtgtgtcttgtacccctatcagatctccccgcgctacgaccagcgc
tctctggtgtccggaggcgtcgacttctccgtcattgtctgggacattttcactggagag
atgaagcacattttctgtgtccatggaggagagatcacccaacttattgtcccgcctgaa
aactgcagcacacgagtgcagcactgcgtctgctccgttgccagtgaccactctgtcggc
ctgctcagcctcagggaaaggaagtgcatcatgctggcgtcgcgacacctcttccccatc
cacgtcgtcaaatggcgcccagcagatgactaccttgtggttggatgttcggatggctcc
gtgtatgtctggcaaatggacacaggtgcgctggatcgttgcgtgatgggaataactgca
gtggagatcttgaatgcctgtgatgagctggccccggccaccgtggatgccctcagccac
tcggctgtgaacctgaaacaggcgatgacccgccggagcctggcggcgctgaagaacatg
gcccagcacaagctgcagaccctggccaccaacctgctggctgcagacaacgctgacaag
ggcaacctgccaaaatactcccataatgccctggtggtccaggcaatgaagacaaacctg
acagatcctgacatgcatgtgttgttctttgatgtggaagcggtgatcatccagctgcta
acggaggaagcccagagaccaaaccccacattggtgtccccagagacactgcagaagagc
caggccggcgctgacaagggcggttcttttctggccaacaagatcttcaaacaggtgaag
gagacgatgaaagagaccatcaaggagcacttgttggatgaagacgaggaggaggaagag
gagatgagaaggcgtgaggagaagtccaagtctttgagtttactggagtataacttgaca
atggacacagccaagctcttcatgtcctgcctgcatgcctggggcctgaatgaacagctg
gacaacatctgcctggagcggctgggcatgctcaggccacactgtcccatctcctttggc
ctgatctccagagggggtcacatgtcccttatgctgcccacctttaaggagtctttgctg
cggcagttgtctctggctactggtctgaaactgactctgagcgacattgtgggaaagggg
acatatggtgtttccagggccgtcaccacgcagcacctcctgtcggtgatatcactggcc
aacacgctgatgggcatgaccaatgccacctttgttggagagcacatgaagaaagcaccg
gccaggcctcctagaccaggaggaaccccagagagtcctcgcagaatgcaagctacccct
cctcaaccttccaacccggcgctacaggcccagatcaaacaagctgctgtagctgccaca
gccaacactggtactgttactactgctgctgggcctccaggggcccctggggccccccct
cagggagcccctggctctcccagccctggccctgcacttaacgtcccctcagtcaacgaa
ggttggagtcagttggcagccatgcactgtgtgatgctccccgaccttcttggcctggac
aaattcagacctcctctgctggagatgttagcaaggaggtggcaggacaggtgtctggag
gtgcgagaggcagcccaagctctcctgttggcagaattaaggaggattggtgtctcgggc
cgtaaagacaccattgacatgtgggcttcttacttgcctcagtatgtggacacggtcagc
tcccctggctccacctcggaggccccgtctccagccccgcccccgcccgatgctcagcca
atagaaaccaaggcctctgaggaagaaatggatgtagtagatgatgacatcacaacaggc
tgtctctccagccttccaccaaatgctaagaagatctcaaattcatatgaagagcggcgt
aaacaagccaccgccattgtgttgctgggggtcattggggctgagtttggggccgaaatt
gaaccgccgaagggttcaggacgggctcgggctggaggacaagcaccggagggcttcgga
ctgacaagtggaggatcatcaaactattcccttgctagacacacttgtaaagctctgact
ttcctgcttctgcaacctcccagtcccaagctgcctcctcacagcaccatccgccgcacc
gccatcgatctgattggccgaggtttcactgtgtgggagccgtacatggacgtgtctgca
gtactcatggggctgctggagctctgcgctgatgcagagaagcagctggccaacatcacc
atgggtttgccgctgaatccacccgcagattctgctcgctcgtctcgccacgctctttct
ctcattgctacggctcgtccacctgccttcatcacaaccatcgccagagaggtccatcga
tacaacgcggctcaggccaactctcagtcacagcagaacattcacaccaccactctggcc
agagcaaagaccgagatcctgcgggtcatcgacatcctgatagaaaaaatgcctggcgat
gtcgtggacctattagtcgaggtcatggacatcatcatgtactgtattgaaggttctctt
gtgaagaaaaaaggtcttcaagaatgtttccctgccatttgcaagttctatatggttggt
tactgtgaccgcagccaccgcatcgccgttggagcccgtcagggttccgtggccctctac
gacgtccgcacaggaaaatgccagaacatccatggacacaagggtccaatcacagccgtg
tcgttcgctcctgatgggcgttacctggcaacctactcaaacgctgacagtcacatctcc
ttctggcagatgaacaccagtctgctgggcagcatcgggatgctgaactcggccccccag
ctccgctgcattaagacctaccaggttccaccagtgcagccagcatccccaggttcccag
aaccacctgaagctggcccgtctcatctggacctccaaccgcaatgtcatcctcatggcc
cacgatggcaaggagcacaggttcatggtgtag

DBGET integrated database retrieval system