Takifugu flavidus (sansaifugu): 130517237
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Entry
130517237 CDS
T09160
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130517237 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130517237 (xrcc4)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130517237 (xrcc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
UPF0242
YwqH-like
GEMI5_RBS
ZapB
DivIC
Motif
Other DBs
NCBI-GeneID:
130517237
NCBI-ProteinID:
XP_056874997
LinkDB
All DBs
Position
20:complement(2494918..2510121)
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AA seq
336 aa
AA seq
DB search
MHQTSVRPVHVPSEPDSSYFLRVDWSGRGLGCGFELLLTDGQNAWRGDVSEAAVCREAEE
LEMQPERYIQDLQQALTGTEKSTNYSFVLTPSPPNSSSAVTLAYEKVQRDISFRMGSVLL
KAIPEPTEAVRELLVHSLQRGNALERHNSKLEEENQRLIEEHQRITAELKHYAGDKEALE
AELYSRFVLVLNEKKAKIRSLQQNITRLQEASADKQQKKDSVKCDQSAGQEQDEYGGSTD
EEPGDARETAASASLPPEASAEGPLDDSLKDITDVAPCRKRRFRHVPAPQPEVKRPQRPQ
KRRPDPPGGSSKHQTPQRSTDAAAESPDTEDLFEDF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagacatcagtacggccagtccacgtcccatctgaacctgactcctcctacttc
ctgcgggttgactggagtgggcgtggcttaggctgtggctttgagttgctgctgactgat
ggacagaatgcttggagaggagatgtcagtgaagcagcagtgtgtcgggaggctgaggaa
ctggagatgcagcctgagcgttacatccaggacctccagcaggcgctgacaggaacggaa
aaatccaccaactacagcttcgtcctgacgccatctcctcccaacagcagctccgccgtc
acgctggcctacgagaaggttcagagggacatttctttcaggatgggctctgtgctgctg
aaagccatcccagagccaacggaggcagtgagggagttactggtccacagtctccagagg
ggaaacgctttggaacgccacaacagcaaacttgaagaggagaaccaaagattgattgaa
gaacatcaacgcatcactgctgaactgaaacattatgcaggcgataaagaagccctggag
gccgagctgtactctcgattcgtcctggttctgaatgaaaagaaagcaaaaatccgttct
ctacagcaaaacatcacacgactacaggaggcaagcgccgataaacaacaaaagaaggat
tcggtaaaatgcgaccaatcagcaggccaggagcaggacgaatatggcgggagcactgac
gaggagccaggggacgcccgggagacggcagcctctgcttcccttcccccagaggcctct
gctgagggcccgctggacgacagcttgaaggacatcaccgacgtggccccttgtcgcaaa
cgtcgctttcgccacgtcccggccccccagcctgaagtcaaacgaccccaacgcccccag
aaaaggagacccgacccccctggaggatccagtaagcaccagactccccagcgctctaca
gatgctgcagcagaaagtcctgacactgaagacctatttgaagatttttga
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