Takifugu flavidus (sansaifugu): 130517281
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Entry
130517281 CDS
T09160
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130517281 (ythdc1)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130517281 (ythdc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
130517281
NCBI-ProteinID:
XP_056875044
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All DBs
Position
20:6463179..6470370
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AA seq
692 aa
AA seq
DB search
MAADRREDKDGELNVLEDILTEAPDQDDELYNPESEREISDKKGTKRKLEHSDIRDLKRP
RPSSRQGPSRSSSNNKRSSGPHLSSSSSKKLGSSPRGRHAGTSSYCPDYYDERKGHRGTR
DGTRSRGGEDMRRRESHRGLESISQKMRREERRPSPSPHGEDNHSEEEDEAGAEYGSEPR
SGSSSPNASHVEEEEEHEDEEEDDEDEEGMEEEEEEEEEEEGEKEDEEEEDDEEEYEHRG
GDGNDYDTRSEAGDSRSASSVSFSDGESVHSGSASEGSGSDKKREKLSSSVRAVRKGIDR
KFVTCQDPSSKLDYILRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARS
VILVFSVRESGKFQGFARLASESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFT
KTAHLSNPWNEHKPVKIGRDGQEIQPDIGAQLCLLFPLDENVDIHQVARRIRHKRRTPSE
QRPRGRPPQREPGRRRPEEYDLHSRKRPRIDGPPDFNQRAGFIQDLRSQPVDRRFSGVRR
DVFLNGSYNDYMRDYHHNIGPPAPWQTLATYPSVDQPPPHHPPYYHHNHPPPPPHQAYHH
HHHPALPPHDAPPPRFRDKQRPPQHRAFASSPHDYDMRVDDFLRRTQAVVSSRRERDRQR
DRERVGPRRDRERERGRDRDRERDKERGRYRR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccgacgagaagacaaagatggagagctgaatgtcctggaagatattcta
acggaagctcctgatcaagatgatgagctttacaacccagaatcagagcgggaaattagt
gacaagaaaggaacaaagagaaaacttgagcactctgacatccgggacttgaagaggccc
cgtccttcgtctcgccagggcccctccaggtcatcttcaaacaataaaagatcctctggt
ccacatctgtcatcatcctcatcaaaaaagctgggttctagccctcgcggtcgccatgct
ggcaccagtagttattgtcctgactactatgacgagcgaaaaggacatcgaggaacccgc
gatgggactagaagccgtggaggggaagatatgcggcgcagagagtctcatcgaggcctg
gagagcataagccagaaaatgcgacgtgaagagaggagaccaagcccgtccccacatggc
gaggataaccactctgaggaggaagatgaggcaggagcagaatatgggtcagagccacgg
tctggaagctcctcccccaatgcttcccacgtagaagaagaggaggaacatgaggacgaa
gaagaggacgatgaagacgaagagggtatggaagaagaagaagaggaggaggaagaggaa
gaaggagagaaagaggatgaggaggaagaagacgacgaagaggagtatgaacatcgtggc
ggagatggaaacgactatgatactcggagtgaggcgggagactcgcgctctgcgtcttct
gttagcttctctgatggcgagtcggtgcattcgggttctgcctctgagggctcagggtcg
gacaagaagagggagaagctgtcgtcctccgtgcgagcagttcgaaaagggatcgacaga
aagttcgtcacgtgtcaggatccgagcagtaaattggattacatcctgcgagacgccagg
ttcttcctgatcaagagcaacaaccatgagaacgtctcgctggccaaagctaagggggtt
tggtccacgctgccggtgaacgagaagaaactgaacgcagcgttccgctcagctcggagc
gtcatccttgtcttctctgtcagggagagcggcaagttccaaggtttcgcacgtttggca
tcggagtctcatcacggtggatctccgatccactgggttcttcctgccggcatgaatgca
aagatgctgggcggagtgttcaagatcgactggctttgcaggagggagcttccttttacc
aaaacggctcacctgtccaatccctggaacgaacacaagccagtcaaaattggacgtgac
ggacaggagatccagccagacatcggcgctcagctctgtttgctcttcccattggatgaa
aacgtggacatccatcaggtagctcgccgtattcgccacaagcgccggaccccatcagaa
caacggcctcggggtcgaccaccacagcgcgaaccgggaaggcgtcgtcctgaagagtac
gacctccacagcaggaagagaccacgaattgatggtccgcccgacttcaaccagcgcgca
ggattcatccaggaccttcgtagtcaacctgtggacaggcggttctctggggtcagacgg
gacgtgttcctcaacgggtcttataacgactacatgagggattatcaccacaacatcggc
cctcctgctccctggcagactctggcgacctaccccagcgtggatcagccgcctcctcac
caccctccatactaccaccacaaccaccccccaccgccgcctcatcaggcctaccatcat
caccaccacccggctcttccgccccatgacgctccgccgcctcgcttcagagacaagcag
cggcccccacagcaccgcgccttcgcctccagtccccacgattacgacatgcgcgtggat
gacttcctgcggcggacgcaggcagtggtgagcagccggcgggagcgagatcggcagcgg
gaccgcgagcgagtgggaccacgccgagaccgcgagagggagcggggccgggatagagac
agagagcgggataaggagagggggcgctaccgcaggtga
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