Takifugu flavidus (sansaifugu): 130517320
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Entry
130517320 CDS
T09160
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130517320 (vldlr)
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130517320 (vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Endonuc-BglII
Motif
Other DBs
NCBI-GeneID:
130517320
NCBI-ProteinID:
XP_056875099
LinkDB
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Position
20:complement(11904735..11928889)
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AA seq
864 aa
AA seq
DB search
MVTSTPGILLLHLLVCLQHRVDVHGTKTECEASQFQCGNGRCILSVWQCDGDDDCTDGSD
ENSCVKKTCAETDFVCHNGQCVPKRWHCDGEPDCEDGSDESLDICHTRTCRLNEVSCGAG
STLCIPVFWKCDGEKDCDNGEDEVNCGNVTCAPNEFTCASGRCISRNFVCNGEDDCSDGS
DELDCAPSSCAPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSHCGRHPTPPAKCSSSE
MQCRSGECIHKKWRCDGDRDCKDGTDEANCPVRSCGLDQFRCDDGSCIQGSRQCNGLRDC
ADGSDEVNCKNVTQCSGPEKFKCRSGDCIEMSKVCNKVRDCPDWSDEPIKECNVNECLLN
NGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHN
GYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQLVEQQRNAVALDADFNQQTI
FWADLGQKAIFSAVLDKRGDIGVHSKVVDNVQTPVGIAVDWIYKNLYWSDLGTKTISVSN
FNGTKVKVLFDRSLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVVSDLQW
PNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSEYLAHPFALTVFEDRVFWTD
GENQAIYGANKFSGSDVATLASNLNDPQDIIVYHELIQLSGTNWCAEKGENGGCSYMCLP
APQINKHSPKYTCVCPDGQELAADGLRCIPDASTKDPSEDAGKALSQPPAEANVSTSIQV
DSTARGSAAAWAILPVLLLAMAAAGGYVMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDI
TRHGANVGHTYPAISIVSTDDDLS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccaccccggggatcctgctgctgcacttgctagtatgtctccagcaccgc
gttgacgtccacggtacaaagacagaatgtgaggccagtcaattccagtgtggcaacggc
cgttgcatcctatcggtctggcagtgcgacggcgatgacgactgtaccgacggcagcgac
gagaactcctgtgtgaaaaagacttgtgcggagacggactttgtgtgccataatggccag
tgtgtacctaagaggtggcactgtgatggggaaccagactgtgaggatggctccgatgag
agtttagacatctgccacacacggacatgtcgtttaaatgaagttagctgtggcgcaggc
tccactctgtgtattcccgtcttctggaaatgcgacggggagaaagactgcgacaacgga
gaggacgaggtcaactgtggaaatgtcacctgtgctccaaatgaattcacctgtgccagt
ggccgttgcatttcccgcaactttgtctgcaacggtgaggatgactgcagcgacggttcc
gatgagctggactgtgcgccgtcctcctgtgctcccagtgagttccagtgcggaaactca
tcctgcatcccagccagctgggtttgtgacgatgatgtcgactgtcaggaccagtcagat
gaatctccatcccattgcggccgtcacccaacacccccagctaagtgttcatccagtgag
atgcagtgccgcagtggagagtgtatacacaagaagtggaggtgtgatggagaccgagac
tgcaaggatggcacagatgaagccaactgtcctgtacgttcatgtggcctggatcagttc
agatgtgacgatggaagctgcatccagggcagcaggcagtgtaatggccttagagactgt
gctgatggatcagatgaagtcaactgtaagaacgtgactcagtgcagcgggccagagaag
ttcaagtgtcgcagtggggactgcattgagatgagcaaagtgtgcaacaaggttcgagac
tgtcctgactggagcgatgaacccatcaaggaatgcaatgtaaacgaatgtctccttaac
aacggcggctgctctcacatctgtaaagacatggtgattggctttgaatgtgactgcacc
cctggactgcagctcattgaccacaaaacctgtggagacatcaatgagtgtctgaaccct
ggtatctgcagtcagatttgcatcaacttgaaaggaggatacaagtgtgagtgtcacaat
ggctaccaaatggatccaactacaggagtctgcaaagctgttggcaaggagccctgcttg
atctttacaaaccgccgtgacatccgtcgcctcggcctggagaggaaagaatacactcag
cttgtggagcagcagaggaacgcagtggccctggatgcagactttaaccagcagacaatc
ttctgggctgacttgggacaaaaggctatttttagcgcggtgctggacaaaagaggagac
atcggagtgcacagtaaagtggtggataatgtccagactcctgtggggatcgctgtggac
tggatctataaaaacctgtactggtctgaccttggcaccaaaacaatttctgtatccaac
tttaacggcacaaaggtgaaggttctgtttgaccgaagcctgaaggagccggcgtcgatt
gctgtggacccgctctctggtttcctgtactggtccgactggggtgagcctgctaaaatt
gagaagtccggtatgaacggagttgaccggcaagttttggtggtatcggatcttcagtgg
cccaatggaatcaccttggatctgatcaaaggcaggttgtactgggttgactcaaagctg
cacatgctctgcagcgtcgacctgaatggagacaacaggaagaaggtgctccagtcctcg
gaatacctggcccatccgtttgctctcacagtgttcgaggatcgagtcttttggacagat
ggtgagaatcaagctatttatggtgcaaacaaatttagcggctctgacgtggcgacacta
gcgagcaacctgaatgacccacaggatatcatagtctaccatgagctcattcagctctct
ggtaccaactggtgtgcagagaaaggtgaaaatggcggctgtagctacatgtgtcttcct
gctccacaaatcaacaaacactctccgaagtacacttgtgtgtgtcctgacggccaggag
ctcgctgctgacgggttacgttgcattccagacgcctctaccaaagatccttcagaggat
gctgggaaggctctaagtcagccacctgcagaagctaacgtgagcacgtccatccaggtg
gactccacagccagaggttctgctgcagcctgggcgattctgcctgtcttgctcctggcg
atggcagcagctggtggctacgtgatgtggcgaaactggcagctgaagaaccagaagagc
atgaactttgacaaccccgtgtacctgaagaccacagaagaagacctcaacattgatatc
acccgacacggagccaatgtgggacacacatatcctgcgatatcaatagtcagcacagat
gacgatttgtcgtga
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