Takifugu flavidus (sansaifugu): 130517452
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Entry
130517452 CDS
T09160
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130517452
03041 Spliceosome [BR:
tfs03041
]
130517452
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130517452
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130517452
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130517452
NCBI-ProteinID:
XP_056875319
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Position
20:3517011..3522863
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AA seq
385 aa
AA seq
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MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTDMVSPMQQVQMPQQNTMSFAAQH
YSQWGQWYGNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNQLHAGAGWTGMSAVSNGGMV
EPGQGVNGTMLTNQTGMSTAGYPTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacagcccaaaaccctgtatgtggggaatctgtccagggatgtgacagag
gccctcatcttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggccatgatccgtactgctttgtggaattctatgaacatagacacgccact
gccacaatcgcagccatgaatggtcggaaaattctgggtaaggaagtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagcagtcacttccacgtcttcgttgga
gatctaagtcctgaaatcaccacagatgacatcaaagcggcttttgggccctttgggaaa
atatcggactgtcgggtggtcaaagacatggccacaggtaaatctaaaggatatggcttt
gtctccttcttcaacaaatgggatgcagagaacgccatacagcagatgggtgggcagtgg
ctgggaggcaggcagatcagaaccaactgggccacaaggaagcccgcccccaagactaca
aatgaaactactaacaccaagcaactatcttttgacgaagtggtcaaccagtccagcccc
agcaactgcactgtttactgcgggggggtgacaacaggtctcacagagcaaattatgaga
cagaccttctcaccctttggccatataatggaaatccgcgtgttcccagacaaaggctac
tcatttgtgaggttcaactctcacgaggcagcagctcacgccatcgtgtccgtcaatggc
acgaccatcgagggctacgtcgtcaagtgttactggggcaaggagacgacggatatggtc
agccccatgcagcaggtgcagatgccgcagcagaacaccatgagctttgcagcgcagcac
tacagccagtgggggcagtggtacggcaacacgcagcagatcggacagtacgtccccaac
ggatggcaggtacccagctatggcgtctacgggcagacctgggatcaacagggttacaat
cagttacatgccggggctgggtggacaggcatgagcgccgtgagcaacggaggcatggtg
gagccaggtcagggggtcaacgggacgatgctaaccaaccagactggcatgagcaccgcc
ggctaccccactcactga
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