Takifugu flavidus (sansaifugu): 130517771
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Entry
130517771 CDS
T09160
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130517771 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130517771 (nup54)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130517771 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
130517771
NCBI-ProteinID:
XP_056875864
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All DBs
Position
20:5643384..5648316
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AA seq
579 aa
AA seq
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MAFSFGGATSSTAGNTPGFSFGSFGSKTTASQPFGFGSAATTTTAPSGLSTLTAPAFGTS
TTTAAAPATGFSFGSTGTGFGGLGAGSTTAGTFGGFGTTTTTATGTGSTFSFGPSNNATG
GLFSTTQNKGFGFSSGLGAGTTTGTSGFGTGLGTSGLGGFGGFNIQQTQPVGLFGQQAQQ
PGQAQPTQLFQQVTALSAPTLLGDERDAILAKWNQLQAYWGTGKGYYSNNNPPVEFTQEN
PFCRFKAVGYSCVPVTKDEDGLVVLVLNKKEADVRAQQQQLVESIHKILGNNQTLAVNVD
GVKPLPNDQTEVIIYLVERSLNGTSKRIPATTLFSYLEQANIKAQLTQIGVVMSATRTEL
SPAQLKQLLQNAPAGVDPIIWEQAKVDNPEPDRLIPVPMVGFKELLHRLQIQEQMTKQHQ
TRVDIISNDISELQKNQATTVAKIVQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEE
HLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLK
QQQEGISRLISVIKDDLEDIKLIEHGLSDGGHMRGGILS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgccacgagtagcactgctggaaacacgcccggcttttcc
ttcggatcatttggatccaaaaccacagcatcacaaccttttggctttggttccgcagct
accacgaccactgctccatccggattgtccactcttacagcccctgcgtttgggacatct
accaccactgctgctgctcctgccacagggttcagttttggctccactggcactggattt
ggggggctgggagctggaagcaccactgctgggacatttggtggcttcgggacaaccaca
acaactgccacaggaacaggctccaccttcagctttggtccttccaataacgcaacagga
ggattgtttagtacaacccagaacaaaggttttgggttttcttctgggctcggtgcaggg
acgacgactggaacatcgggttttggaactggtttaggaacaagtggcctcggtgggttt
ggaggctttaacatccagcaaactcagccagtaggtctgtttggccagcaggcccagcag
ccgggtcaagctcagcccacccagcttttccagcaggtaactgcgctgtcagcacccacc
ttgttaggagatgagcgggacgccatcttagccaagtggaatcaactgcaggcttactgg
ggaactgggaaaggatattatagcaacaacaacccacctgttgagtttactcaggagaac
cctttctgcaggtttaaggctgtaggctacagctgcgtcccagtgaccaaggatgaagat
ggtttagtggttctggttcttaataaaaaggaagcagatgtgcgggctcagcagcaacag
ctggtggagtccatccacaaaatccttggaaataaccagacactcgccgtcaatgtcgat
ggcgtcaaacctcttcctaatgaccagactgaggtgattatttatttggtggaacgttct
cttaatggcacgtccaaacggatccctgccaccacactcttcagttatctggagcaggcc
aatatcaaagcccagctcacacagattggagtggtcatgtccgccacacgcacagagctc
tcccctgcacagctcaaacagctgctgcagaacgcaccagcaggagtggatccaatcatt
tgggagcaggccaaagtagacaaccctgagcctgatagattaatcccagtccccatggtg
ggctttaaagagttgcttcacagactccagattcaagagcagatgaccaaacagcaccaa
acaagagtggatataatctcaaatgacatcagtgagctccagaagaatcaggcaaccaca
gtagccaagattgtccagtacaagaggaagctgatggatctgtctcacagggtgctgcag
gtattaatcaaacaggaaattcagagaaaaagtggctatgctattcaagtagacgaggaa
catcttcgcgtgcagctggacaccattcagtctgaactcaatgcccccacccagttcaag
ggccgattgaatgaattaatgtcccaaatccggatgcagaaccactttggagcagtgaga
tcagaagaacgttacagtgttgacgcagaccttctcagagaaatcaaacaacacttgaag
cagcagcaggaaggtataagtcgtttgatcagcgtcatcaaagacgacttggaagacatc
aagctcatagagcacggactcagcgacggtggccacatgaggggagggattctaagctga
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