Takifugu flavidus (sansaifugu): 130517810
Help
Entry
130517810 CDS
T09160
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfs01009
]
130517810 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130517810 (sfpq)
03041 Spliceosome [BR:
tfs03041
]
130517810 (sfpq)
Protein phosphatases and associated proteins [BR:
tfs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130517810 (sfpq)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130517810 (sfpq)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130517810 (sfpq)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
130517810
NCBI-ProteinID:
XP_056875919
LinkDB
All DBs
Position
21:complement(85771..101340)
Genome browser
AA seq
661 aa
AA seq
DB search
MSRFNNNRGGMGMNNFQPRRGGGVGGPMRGGLMGNPNMRSHPFQNQNRRGLNNNFNRQPN
QGPPQTPPKQQNQPIIPPPSPGPALTMKGPMEQQKATEKEQGAIKQQTPAPPSTIQSPPA
KTNITSPQHQESKNQDQQLKSPIGNANGQQQKQPPQASPKSTPQQPIRPGLQQPLRPGPQ
QGQRPGLQQGQRPGLQQGQRSGQQQGPRLGPQQGQRSGQQQGQKTAPMAMKRADGQETMD
NPAAQAEGSQAKEFKATLSMLLKPGEKRYTQRCRLFIGNLPNDITEEAFKKLFAKYGEPS
EVFINKGKGFGFIRLESRALAEIAKAELDDTPMKGRPLRVRFATHSAALSVKNLSPFVSN
ELLEEAFSQFGMVERAVVIVDDRGRSTGKGIVEFASKPAARKALDRCSEGVFLLTCSPRP
VVVEPLEQFDDEDGLPEKLAQKNPRYQAEREEPPRFARPGTFEFEYAKRWKSLDEMEKQQ
RQQVEKNMQEAREKLEAEMEDAYHEHQANLLRQDLLRRQEELRRMEELHSQEMQKRKELQ
LRQEEERRRREEEMLRKREMEEQMRRQREENYRMGGFMDREREMRMNSGGAMGLGAGQKF
PMGGLGFEGQQGMGSSPGNMMGNDMRNERFSQGGPRGMGPGNPGYGRVREEFDGPSKKPR
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggttcaacaataatcgcggtggcatggggatgaacaatttccaacctcggaga
ggcggcggagtaggcggcccgatgcgtggtggattaatgggcaacccaaatatgaggagc
catccgtttcagaatcaaaaccgcaggggactaaataataacttcaacagacaaccgaat
cagggaccaccgcagacgccaccgaagcaacaaaaccagccgatcatccccccgccaagt
cccggcccagctctaacaatgaagggcccgatggagcaacagaaagcgacagaaaaagag
cagggagcgattaaacagcaaactcctgcacccccatctacgattcaatcgccccccgca
aagaccaacattacatctccccaacaccaggaaagcaaaaaccaagaccagcagctcaag
agcccgataggaaatgcgaacggacaacaacaaaagcagcctccacaagccagccccaag
tcaacaccgcagcagcccattcgaccgggcctgcagcagcctcttcgaccgggcccgcaa
cagggccagcgacctggtctgcaacaaggccagcgacctggcctgcaacagggccagcga
tcaggacagcaacagggcccgagattgggtccacaacagggccagcgatcggggcagcag
caagggcagaaaactgctccaatggcgatgaaacgggcagatggacaggagacaatggac
aatcctgcagcccaggcggaagggagccaggcaaaggagtttaaggctacgctgtccatg
ttgcttaaacctggtgagaagagatacactcaacgatgccgtcttttcattggcaacctg
cctaacgacataacagaggaagcattcaagaagctttttgcaaaatatggggagcccagc
gaagtgtttatcaataaagggaaaggctttggtttcatccgcttggagtctcgggcactt
gctgagattgcaaaggcagagttggatgacactcctatgaaaggcagaccactccgtgtg
cgatttgccacgcactctgcagccctctctgtgaagaacctgtctccatttgtttctaat
gagctccttgaagaggccttctctcaatttggaatggttgaaagagcggttgtaattgtc
gatgatcgtggccgttcaacgggcaaggggattgtcgagtttgcgtccaaaccagctgcc
aggaaggccctcgatcggtgcagcgagggtgttttccttcttacctgttcgccgcggcct
gttgttgtagagcctttagagcaatttgatgatgaagatggcctcccagagaagcttgca
caaaagaatccccgatatcaagccgagcgtgaggaacctccccgttttgctcgcccagga
acttttgaatttgaatacgctaagcgttggaagtcgcttgacgaaatggagaagcaacag
aggcagcaggtggaaaaaaacatgcaagaagctcgggagaagcttgaggcagagatggaa
gatgcctaccacgagcaccaagccaacttgttaagacaagaccttctaagacgacaggag
gagttgcggcgtatggaggaactgcacagtcaagaaatgcagaagagaaaggagctgcag
ttaagacaagaagaagagcgtcggcgacgtgaagaggaaatgcttcggaaacgggagatg
gaagagcagatgcgtcgccagcgtgaggagaactacagaatgggaggctttatggacagg
gagagagaaatgagaatgaattcaggtggggccatgggtttgggtgctggtcagaagttc
ccaatgggtggacttggctttgaagggcagcaagggatgggatcatctccaggaaacatg
atgggcaatgacatgcgcaatgagcgcttctcccaggggggccctaggggaatgggtcct
ggcaaccctggttatggtagggtccgtgaagaatttgacggcccctctaagaaacctcgt
ttttaa
DBGET
integrated database retrieval system
