Takifugu flavidus (sansaifugu): 130517965
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Entry
130517965 CDS
T09160
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfs00535
]
130517965
Proteoglycans [BR:
tfs00535
]
Extracellular matrix (ECM) proteoglycans
Others
130517965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_PBP1
Fn3_VIN3
VWA_3
Fn3_nematode
Motif
Other DBs
NCBI-GeneID:
130517965
NCBI-ProteinID:
XP_056876185
LinkDB
All DBs
Position
21:10948598..10970471
Genome browser
AA seq
1842 aa
AA seq
DB search
MWFWVTLVRCLPLVWLFPHAAHGQVSSPRRFRAKVLSPSQLQVSWKEPKGEFDGYSVIYA
AAPGGDQMEVQVSKQEAKLLIQDFDPSKDYDFQIIAVRGSEQSRPLHAKHEAAQPTAVER
MESQRPQDSGATEEDNSISAVPEAFMCRTEAIADIVILVDGSWSIGRVNFRLVRAFLESL
VKAFDVDFDRTRIGLAQYSGEPRIEWHLNTHATKGAVMDAAKNLPYKGGNTLTGLALTFI
LENSFRPESGSRPGVPKIGILLTDGKSQDDVTLPAQSLRDAGVEVFAIGVKNADESELNA
IASSSEDTHVYNVQDFNVMADIVDLLTRTICERMETLYKHMKAAGRVDPAPPPAAVSPPS
DLQVSEVTARSFRVTWTQAPGQVEKYRVVYYPASGGQPDEKVVQGTESSVELNYLNSLTE
YQVAVFSVYRSSASSALRGSATTLELPVVKELELRDITHNHMVVRWEAAEGASGYMILYA
PLTEEDPADEKEVKVDGSVNEVELKDLTPATEYTVTVYAMYGEEASDPVTNQQTTLPLSP
AVDLRLSDVTHNSARITWNSNSNAVNGFRIMYVKADGVQTNEVDVGRVTSWLLRNLTSLT
EYTVGVFALYDEGRAEAVSDSFITKNVPEPLDFRSSDVTTDSFRVSWEHPASDVVLYRLI
WSPTDGGDPEDVLVDRNINTYVIKGLSPGSEYEVLLAAMYNNEVESDEVTLVESTVTFTT
TIATTTTSTEAPRFAVRNIRIDEKTTFSMRVSWQPVDITNVQHYRLSYSSDGGEEETRVL
PVGQNSLILQPLLADTDYRIHVTPVYHHGDGPTTTQIDRTLPLSAPQNLQVSEEWYNRFR
ISWDAPPSPTVGYRVIYQPLSAPGPALETFVGEGVSSMLLVNVLSGTEYSVKVIASYSTG
PSEPLSGRAKTLFLGVSNLTPYQVRMTSLCAQWQPQRHASTYRLLVESLLNGQKQERRLS
GGTSRHCFTNLTPNTRYKISVYAQLQDGFEGPAVTATEKTLPVPTPPPTRPPTTTPAPTS
PAPKEVCKAARADLVFLVDGSWSIGDENFLKIIRFLSSTVGALDQIGPDGTQVAIVQFSD
DPRTEFKLNSYSDKERLLEAVSSISYKGGNTKTGRAIQHVKDNIFTEEGGVRKGVPKVLL
VLTDGRSQDDVNKVSKEMQREGYIVFAIGFADADYGELVSIASKPSTRHVFFVDHLDAFK
EIEEELVTFVCEAATATCPSGVMGDSATPGFRMMELFGLEESRYSSVSGVSMVPGTFNSF
PCFHLQADAFLAQPTRFIHPEGLPSDYTITLLFRLLPDTPEEPFALWEVLDKNQEPLVGV
IVDNGGKTLTFFNNDYKGEFQTVTFEGPEIQKLFYGSFHKLHIAISKTSAKVVIDCRMVA
EKSINAAGNISRDGVVVLGRMVRSRGNKDNSAPFQLQIFDIACSTLWASRDKCCELPGLR
KEADCPAMPKACTCTQDSKGPPGPPGPPGGPGIRGARGDRGEPGPVGPAGPVGETGVPGP
QGPQGPQGPSGRSIMGPAGSPGERGQKGEPGQQGAQGVPGRAGAAGRDGPPGPRGLSGKD
GPQGRPGPPGTIGTPGAPGAPGNTGPTGKQGELGPPGLPGGKGDKGERGDVQSTASVQAI
ARQVCEQLIQSHMARYSAVLNHVPSPPASIRTVPGPPGEPGRPGSPGTQGEQGPPGRPGF
PGQNGQNGQPGERGTPGEKGEKGSQGVGLQGPRGPSGPPGVPGQGRPGSQGPSGRPGNPG
PPGRPGVPGPVGSSGPPGYCDPNSCVGYNVGEDVTDGGAVPPVQLPANIFPNYGEVEEDD
PYRYYQPNYPAPRPVAPDDPALSPDDIDAYRGVRSVEGARGG
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgtggttctgggtcacactggtccgatgtctgccgcttgtctggctctttccacacgct
gcacatggccaagtttcgtcaccacggcgtttccgtgccaaagtcttaagcccctcccag
ctacaagtgtcttggaaagagccaaagggggagtttgatggctacagcgtgatttatgca
gcggcgccaggtggggatcagatggaggtccaggtatcaaagcaggaagcaaagctactc
atccaggatttcgacccttccaaagactacgactttcagatcatcgcagtgagaggaagt
gagcagagcagacccctgcacgccaaacatgaagcagctcagccgacagcggtggagagg
atggaatcccagaggcctcaggacagcggcgccactgaggaggacaacagcatctcagca
gttccagaagcatttatgtgcaggaccgaagccatcgcagatattgttattctggtggac
ggttcctggagtatcggacgggtcaacttcaggttggtcagggccttcctggagagcctg
gtcaaagccttcgatgtggactttgataggaccaggattggtctggctcagtacagcgga
gagcccagaatcgagtggcacctgaacactcatgccaccaaaggggctgtgatggacgcc
gccaagaacctgccatataagggagggaacacgctgacaggtttggctctgacctttatc
ctggagaacagcttcagaccagagtccggatccagacccggcgttcccaagataggaatc
ttgctgaccgacggaaagtcgcaggacgatgtgactctgcccgcacagagcctgagggat
gctggggtggaagtgtttgccatcggtgtgaagaacgcggacgagagcgagctgaacgcc
atcgcctcatcctctgaagacactcacgtctacaatgtccaggactttaatgtgatggcc
gacatcgtggacctcctcaccaggaccatctgtgagcggatggagacgctctacaagcac
atgaaagctgcaggtagagtcgaccccgcccccccacctgccgctgtgtctcctcccagt
gatctgcaggtgtcagaggtcacagctcgcagcttccgtgtcacgtggacgcaagcgcca
ggtcaggtggagaagtaccgcgtggtgtactaccctgccagtggaggacagcctgatgag
aaggtggtccaggggacagaaagcagcgtggagctgaactacctgaactctctaacggag
taccaggtcgccgtcttctccgtgtaccgcagctcagccagctcagccctcagagggagc
gccaccacgttggagctcccagtggtgaaggagctggagctgcgggacatcactcacaac
cacatggttgttcgctgggaggcagccgaaggggcttctgggtacatgatcctctacgcc
cccctaacggaggaagaccctgccgatgagaaggaggtcaaggtggatggctcagtgaat
gaggtggagctaaaggacttgaccccggccacggagtacacggtgactgtgtacgccatg
tatggcgaggaggccagtgaccctgtgaccaaccagcagacaacacttcctctgagtcca
gcggtggatctacgcctttctgatgtgacccacaactctgcacggatcacctggaactcc
aactccaacgccgttaacggcttccgcatcatgtatgtgaaggcggacggtgtccagacc
aacgaggtggacgttggccgtgtgaccagctggctgctgaggaacctgacgtctctgacg
gagtacacagtcggagtgtttgccctgtatgatgagggacgggcggaggccgtgagcgac
agcttcatcacaaagaacgttccagaaccgctggacttcaggagcagtgacgtcaccaca
gatagcttcagggtgtcctgggaacacccagccagcgacgtggtgctgtaccgcctcatc
tggtcgcccacagacggaggagaccccgaggatgttctggtggacagaaacatcaacacc
tatgtcatcaaaggactcagccccggttctgaatacgaggttcttctcgctgccatgtac
aataatgaggtggagagcgatgaggtcaccctggtagaatccacagtcacgtttacaaca
actattgctacgacaaccaccagcacagaagctcctcggttcgctgtgaggaacatcagg
atcgatgagaagaccacgttcagcatgcgtgtgtcctggcagcccgtcgacatcacaaat
gttcaacattatcgactcagctacagcagcgatggaggggaagaggagacgagggttctt
cctgttggccagaacagcctgattctgcagcctctgctggcagacacagactacagaatc
cacgtcacaccagtgtatcaccatggagacgggccaacaaccacgcaaatcgaccgaaca
cttcctctgtcggctccacagaacctgcaagtatctgaggaatggtacaaccgcttcagg
atcagctgggatgcgccgccgtccccgacagtgggctacagggtcatttaccagccattg
tctgctccggggccggccctggagactttcgtgggggagggcgtgagctccatgctgctg
gtcaacgtgctgagcgggacagagtacagcgtcaaggtcatcgcctcgtacagcaccggg
cccagcgagccgctgtcgggcagggccaagaccctgtttctgggggtgagcaacctgacg
ccgtaccaggtgaggatgaccagcctgtgcgcccagtggcagcctcagcgccacgccagc
acctacaggctgctggtcgagtccctgctgaatggtcagaagcaggagcggaggctgagc
ggagggaccagccgacactgcttcaccaacctgacgcccaacacgcgctacaagatcagc
gtttacgctcagctgcaggacggcttcgagggacccgccgtcaccgccaccgagaaaaca
ctgcccgtgccgacgccgccccccaccagacccccgaccaccacgccggcgcccaccagc
cccgcccccaaagaggtgtgtaaggcagccagagccgacctggtcttcctggtggacggc
tcctggagtatcggtgatgagaacttcctgaagatcatccgcttcctgtccagcactgtg
ggggctctggaccagattgggccagacggcacacaggtggcgatcgtccagttcagtgac
gacccccgaacagagttcaagctcaactcctacagcgacaaagagcgtctcctggaggcc
gtcagcagcatctcctacaagggaggaaacaccaaaacaggtcgggccatccagcacgtg
aaggacaacatcttcacagaggagggcggggtcaggaaaggtgtccccaaagttctgctg
gtgctgacggacggccgatctcaggatgatgtcaacaaggtttccaaggagatgcagaga
gaaggctacatcgtgttcgccatcggtttcgccgacgctgattacggcgagctggtgagc
atcgccagcaaacccagtaccagacacgtcttcttcgtggaccacctggacgccttcaaa
gaaattgaggaggagctggtgactttcgtgtgcgaggctgctacggccacgtgtccgtcg
ggggtaatgggcgacagcgccactccaggtttcagaatgatggagctgttcggtctggag
gagagtcgctacagcagcgtctctggtgtctccatggtacctggaaccttcaacagcttc
ccctgtttccacctgcaggctgacgccttcctggctcagcccacgaggttcatccaccct
gaagggttgccctcagactacaccatcacgctgctcttcaggcttctgcctgacacccca
gaggaacccttcgccctctgggaggtcctcgacaagaaccaggagccgctggtgggagtc
atcgtggacaacggagggaaaactctgaccttcttcaacaacgactacaagggagagttc
cagaccgtcaccttcgaaggacccgaaatccagaagctgttctacggcagcttccacaag
ctccacatcgccatcagcaaaacgagcgccaaagtggtgatcgactgcaggatggtggcg
gagaaaagcatcaacgcggcggggaacatcagcagggacggggtggtggttctgggcagg
atggtccgttccagagggaataaagacaactctgccccgttccagctccagatcttcgat
atcgcctgcagcactttgtgggccagcagagacaaatgctgcgaacttcctggactgagg
aaggaggccgactgtccagccatgcccaaagcctgcacctgcacccaggacagcaaaggt
ccccccggcccccccggaccaccaggcggtccagggatcagaggagccagaggagaccgt
ggagagcccggtccagtcggtccagctggtccagtaggtgaaactggtgttccaggacct
caaggacctcaaggcccccaaggcccgagtggtcgctccatcatgggcccagcaggaagt
ccaggagagcgaggacagaagggtgagccaggacagcagggcgcacagggggttccaggt
cgagctggagctgccggcagagacggacctccaggaccccgaggtctgtcaggcaaagac
ggcccccaaggcagaccaggtccacccggaaccatcgggactccaggagcaccaggggcc
ccaggtaacacgggccccactggcaaacagggagagctgggtcctccgggtctaccagga
ggtaaaggagacaagggtgaacggggtgatgtccagtccacggcgtcggtccaggccatc
gcccggcaggtgtgtgagcagctcatccagagtcacatggctcgctacagcgccgtcctg
aaccacgttcccagtccaccagcgtccatccgaactgtgccaggaccaccgggagagcct
ggcaggcctggatctccagggacccaaggagaacagggaccacctggaagacctggcttt
cctggacagaatggacagaatggtcaaccgggagaacgaggcacacccggagaaaagggt
gaaaagggatctcagggtgttggactccaaggccccagaggaccatcaggaccacctggt
gttccagggcagggaagacccggcagccaaggtccttcaggccgacctgggaatccagga
ccccccggacgacccggagttcctggacctgttggctcttctggacctcccggctattgc
gatccaaactcgtgtgtgggctacaatgttggagaggatgtcactgatggcggcgctgtc
cccccagtccaattgccggccaacatcttcccgaactacggcgaggtggaggaggatgac
ccgtaccgatactatcagcccaactacccagcacctcgtcccgtggcacccgatgaccct
gcactgtccccagacgatattgatgcctatcgtggtgtacgcagtgtggagggggcgcgt
ggaggctga
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