Takifugu flavidus (sansaifugu): 130518101
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Entry
130518101 CDS
T09160
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130518101 (vps50)
Membrane trafficking [BR:
tfs04131
]
Protein recycling
Others
EARP complex
130518101 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
130518101
NCBI-ProteinID:
XP_056876423
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All DBs
Position
21:8851333..8899303
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AA seq
995 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQESMADLSPVENFRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDAFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLGVAKEGFTGASLGLLANQRRRHLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVAHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDNMESSPGPDD
AAAAKSGDSVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKWQSVNYFKHYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAASSTGLAQEELSLFQLYLLEGNPFEMHIEHKEEETED
VLASNGYESDELEKCVYQDYDNDSDSDVPEELKQDYVDEQTGDAPLKSVSRETIRSKKKS
DYNLNKANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFG
RNDMPVPSPSLPAHGGREVGTARVVGPACLYESSSLGLISSRLRTTLNRIQESLIEVEAA
GENAGVHGAVEERKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSH
LDTMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAARAIDYEQMLLLMAGVKWDIREIM
SQHNVYVDVLLKEFEQFNKRLADVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKC
SNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSM
KQLANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatgacccggcagggtctgaaaagcccccaggaaagcatg
gcagacctgagtccagtggaaaacttcaggatcccgagtaaggaggagttacgggagctg
agggagcagcccatcgacccgcaggcggagcaggagatcatcgacagcatcgaggaggtc
tacttttccaacgacgccttcgacatggtgcagcacgaactggagaaactcccacctgag
ctgaacctgcaggagttagaagaatacagagacaagctaaagaggcaacaggcagcagtt
tctaaaaaggttgccgatctcatcttggagaaacagcccgcttacgtcaaggagctggag
cgtgtgacggcattgcagaccaacctccagttggcggcggttatttgcactaatgcaaga
aggcaactgggcgtggccaaggagggcttcacgggagccagtttaggtctgctggccaat
cagaggaggcggcatctgcttacgggtcttctcaagtcgctgaggaccatcaagactttg
caaagaacagatgttcggctcagcgagatgctcgaggaagaagactatccaggtgccatt
caactctgcctggagtgtcagaaggctgccagcacgttcaaacactacagctgcatcagt
gaattaaattccaaactacaagacactctggagcaaattgaggaacagctggacgtcgcc
ctgtccaagacttgcaaacattttgatgttgcgcactacaccaaggtccagctggcctac
acgctcctgggcaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacggtattccaagtggttttgggatatgtggaattgtgcgccggcaacgct
gatactaagttccagaagatgcagtacaaggatctttgcacgcatatcaccctggacagt
tacatcccctgcctgacagacctctgcaaagcattgtgggaggtgatgctgagctaccac
cgtaccatgcagtggcacgaggagcacgacaacatggaatcgtcacccggtccagatgac
gcagcagctgctaaatcaggcgattcggtggtggaccgcagctacgtgaagaagaagctg
gagcacgggctaacaagaatctggcaggacgtccaattgaaagtgaaggcctatatcctg
ggaacagacatgtcgaatttcaaatacgatgatttcatcgtggtgctggatgtcatcagc
aggttgatgcaggtgggggaggagttctgtggcagcaagtcggaggtcctgcaggagtcc
atcaaatggcaaagtgtcaactatttcaaacactatcacagggcccgactggaagagctg
aggatgtttctggagaatgagacgtgggaactgtgtccggtcaagtctaacttcaacatc
gctcagctgcacgagtttaagttcatgggccagtgtcgctctccgtcggtctctccgagc
agacaggcggcgtcatcgacgggcctggctcaggaggagctttctctgttccagctgtac
cttctggaggggaaccccttcgagatgcacattgagcacaaagaggaggagaccgaagat
gtgctggcttctaatgggtacgagtcagatgagctggaaaagtgtgtgtatcaagactat
gacaatgacagcgacagcgacgtccccgaggagctcaagcaggactatgttgacgagcag
acgggcgacgcccccctcaagagtgtatcccgggaaaccatcagaagcaagaaaaagtca
gactacaacctgaataaggccaacgcgccgatcctcaccaacactactctcaatgtgatc
cggctcgtcgggaaatacatgcagatgatgaatattctcaagcccatcgcctttgacgtc
atccactgcgtgtcacagctctttgactactacctttacgccgtctacaccttcttcgga
cgcaatgacatgcccgtcccaagcccatctttgccagctcatggtggcagagaggtgggg
actgccagggtggttggccctgcttgcttgtatgaatcatcaagtctgggcctcatcagc
agccgactgaggaccactctgaaccgcatccaggagagcctcatcgaagtggaggcggcg
ggggagaacgcgggagtccacggagcagtggaggagaggaaggagaaggtgcccagtccc
cacctcagccagctggtggtcctcaccaacagtgggaccctgtacgggttagcccagcgg
gtggtggccaccgagtctctcgtgtttttagccgagcagttcgagtccctgcagtcccac
ctggacaccatgatgccggcggccaagaagcctttcctgcagcagttttattcacagacg
gtgtctacagccagtgaattaaggaagccgatatactggatcgtcgccgccagggccatc
gactacgagcagatgcttctgctgatggctggagtcaaatgggacattagggagattatg
tctcagcacaacgtttacgtggacgtcctgttgaaggagttcgaacaatttaacaagcgg
ctggctgatgtttccagacacgtgcgcattcctctgcctgtctccaacgtcctgtgggag
cactgcatccgcctggccaaccgcacgctcgtcgaaggctacgctaacgtgaagaagtgc
agcaacgagggccgcgcgctgatgcagctggacttccagcagttcctcatgaagctggag
aagctgacggacctgcgacccatccccgacaaagagttcgtggagacctacatcaaggct
tattatctcacggagaacgacatggagcagttcatcaagaaccacagggagtactccatg
aagcagctagccaacctggtgaacgtttgcctgggctcccacataaacaagaaggctcgt
cagaagctcctcgccgccatcgacgacatcgacagaccaaagagatag
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