Takifugu flavidus (sansaifugu): 130518180
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Entry
130518180 CDS
T09160
Symbol
sdc2
Name
(RefSeq) syndecan-2
KO
K16336
syndecan 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04514
Cell adhesion molecules
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130518180 (sdc2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130518180 (sdc2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tfs04090
]
130518180 (sdc2)
00535 Proteoglycans [BR:
tfs00535
]
130518180 (sdc2)
CD molecules [BR:
tfs04090
]
Proteins
130518180 (sdc2)
Proteoglycans [BR:
tfs00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
130518180 (sdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Dsc3_C
DUF5305
MtrF
DUF2721
Cadherin_C_2
RIFIN
Motif
Other DBs
NCBI-GeneID:
130518180
NCBI-ProteinID:
XP_056876557
LinkDB
All DBs
Position
21:complement(9606859..9635344)
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AA seq
210 aa
AA seq
DB search
MRSLWITLTLGLTVFLSGETIGRVAAQADDLYLDDTGSGGYYPEDDDDFNSGSGSGGGEE
VVEEAVTISTVYIKPNAVEPTQDSTKVFTPRVEAATDRETAQEITPRKPVRTEAPVPATE
DTQRSQMTSTTSAPGTGQEAIEVRTENLFQRTEVLAAVIAGGVIGFLFAIFLILLLVYRM
RKKDEGSYDLGERKPTGAAYQKAPTKEFYA
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcctttggataactctcaccctcgggctgaccgtcttcctttccggggaaacg
ataggacgagtagcggctcaggctgatgacctgtacctggatgacacaggctcaggaggg
tactaccctgaggatgacgatgacttcaactcagggtccggttcaggtggaggtgaagaa
gtggtagaggaagcggtgaccatcagcacggtttacatcaagcccaatgcagtagaaccc
actcaggattccacaaaagtcttcacccccagggtggaggccgcgacagacagggaaaca
gcccaggaaatcacacccagaaaaccagtcagaacagaggcaccagtgccagctacagag
gacacgcagaggagccagatgaccagcacgaccagcgctcccggtacaggacaggaggcc
attgaggtccgcaccgagaaccttttccagaggacagaggtgctggcagctgttattgcc
ggcggcgttattggcttcctgttcgccatcttcctcatcctcctcctggtctaccgcatg
aggaagaaggacgagggcagctacgacctcggagagagaaaacccaccggtgcagcctat
caaaaggccccaaccaaggagttttacgcgtaa
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