Takifugu flavidus (sansaifugu): 130518315
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Entry
130518315 CDS
T09160
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130518315 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130518315 (arid1ab)
03021 Transcription machinery [BR:
tfs03021
]
130518315 (arid1ab)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130518315 (arid1ab)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Helix-turn-helix
ARID
130518315 (arid1ab)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130518315 (arid1ab)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130518315 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
130518315
NCBI-ProteinID:
XP_056876783
LinkDB
All DBs
Position
21:complement(5806631..5839271)
Genome browser
AA seq
2282 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDSQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLSRVNNNSSIQNDSGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YNRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPYPNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRFNMGTQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQEGANKGAGDMGSSQYGGVHPGWQQRTHHPPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRGQPYGGPNPYSQQQQGPPAGPGPQQGGSYPGQGYGPPGPQRYPMGMQS
RTPGGMGSMQYGQQMSAYGQQGPGGYGQQSQAYYGQHGPPPLPGQQQQQPSYPGQPQGSS
GTPYSQPGHPSQPPGQHGQSGSPYQQSQGPHGPAPGQPPYSQPPHSQQGQPPYVPPQQQQ
QQPQQQQQGPGPQSQQGPQGQSGYPQPPGPGQPPQQPPPPQQQQGPPQPQQQQQQPQQQP
GGPTPQAQPPPGHGQQGQPSPYSQTPPLPQQQQQSPYQRFPPPPQELSQDSFSSQSNASA
SNQAMASSKSSQEDSMQTRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNP
AQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSI
MHSSMNQSAMGQDRVYMRNPQMPPYGSPGHPGQPGSALSPRQSSGGQMHSGMGPYPQNNS
MGNYGPQGGQYGPQGYPRQPGYTGMPNANYPSGPGMGGTMNPMPAQGSGGPYGSIPPGRL
GPGQMGARPYGPGMGTNMGGMHPQVGSGMCPPPGMNRKDGGPSMHHGPTNSIHNRPPGYP
NMSQGMMGAGSPYGPGMNSMHGMMNQGGPGPYPMGTNMANNTPGMPPNSEFGMEKMNPAQ
KINNKVDGTPKTESKKKSSSSTITSEKITRLYDLGQEPERKMWVDQYLAFAEEKAMGMSN
LPAVGRKPLDLFRLYVSVKQIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEDPPPDFFNTDTKKSQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLK
PPTPASTPHTQMPPMPGARSSVNLQDPFADGGDPAFSRRNAMTPNSQGYQPSMGGPEMMG
RMGPYESNKDPFGGMRKAGEQFMQPGPNSGMGEQYNRGPPGPMANMQMGQRQQYPYGYDR
RQESGMGPDGSMGPGAPQPNMMPSGADPGMYSPSRPPPQQRHDSYSNQFPGQGAPPGGPY
PNQQPGMYPQQQPNYKRPVDGGYGPPAKRHEGEMYNVPYSGQQQPGPQSSGPQGQQDMYN
QYNAYPGGDRRPPGPQNQFPFPFGRERGPSSGGPNSQSPMPPQMMASSMPSGPDGPQGPM
WQSRNEMGYPNYPNRQGPPVPGQGPGYHGMNRSEEMMPSDQRMNHEGQWPSHVNQRQPPF
GPGGSGPPMTRPLPSTYQTSQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPGIKVQKAGP
PVPASHIGQAPVQQPMIRRDVAFPPGSVEASQPHLKPRRRLTMKDIGTPEAWRVMMSLKS
GLLAESTWALDTINILLYDDNSISTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVGD
PGQRTLIDPNAAEDSDNDLPLPEGDGMDLVEDDEEDEEVEESKANADASLVRVKQEEESS
QKHKCSEDEEEDSERESLIKEPNTSTSGSSQDPGLHSERPRQASKFDKLPLKVVRKKNPF
LVNHSSKLGQRQNFDSGLIHWSIGGGDTTDHIQTHFESRADHLKQRKRKPAATESRKKAQ
VTEAVTENSEKSNSGLEEKPQRQPQSSGPQKSPSEKAPPPLIATIDDVLSARPGSITEEA
VRGGAEEQKENGKYLFSINPELQSRRNVKILEDEPHSKDETPLSTLSDWQDSLARRCICV
SNIVRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGVSCE
RDEWWWDCLEVLRENCLVTLANISGQLDLSIYSESICLPLLDGLLHWAVCPSAEALDPFP
TLGPHGSLSPHRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVAVCR
EMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQMQGGPQF
EPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIG
QS
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaagtcgctagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggaccgggactcgcaggaggagtcggtaccgggagagaaacagcatgaaaataag
gaaccgggacctgacggcggatctccgggccagaaagagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgatatgaagaacggcaacgggaatttgtccagg
gtaaataataatagcagtattcagaatgattcaggcgggcccgaagggaataaccatccc
ggtatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacaaccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctaccccaac
cattacaacaactacagcccgtacccgaacaggacttcttaccagggccaaggttacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcaa
cagccagcaggaggaaccacggctatggctgcctcttacaataatcagaggtttaatatg
ggaacccaacaacctacgtctacgccaactttgaatcagcttttgacatcacccagctct
gccaggagctacccgaattacccccaaggagactataacaatcaggaaggggccaataag
ggagcaggagacatgggcagcagtcagtatggtggggtccatccgggttggcaacaaagg
acccaccatccgcctcctatgagcccgggaaacactggacagcctcccaacagaaaccag
cctccgagcccaatggaccaggtagggaagatgcgcgggcagccgtacggaggacccaac
ccttattcccagcagcagcaggggcctcccgcagggcccggaccccagcagggaggctcc
taccctggtcaaggctacggtcctccaggtcctcagaggtatccaatggggatgcagagt
cggacccctgggggtatgggcagcatgcagtacggacagcagatgtcagcctacggacag
caaggcccaggaggctacggccagcagagtcaagcctactacggtcagcacggcccccct
cccctccccggtcagcagcagcagcagccgtcgtaccctggccagccccagggcagttct
ggaactccctactcccagccgggccatccttcacagccaccgggacaacacggacagtca
ggatccccttaccaacagtcccaaggcccccacggccccgctccaggtcagcctccttat
agccagcccccacattcccagcaaggacagcctccctacgtccctccccagcagcagcaa
cagcagcctcagcagcagcagcaagggccgggtcctcaaagtcagcagggtcctcaaggt
cagtccggttacccgcagcctccaggaccggggcagccgccgcagcagcccccacctccg
cagcagcagcagggccccccacagccacagcagcagcagcagcagccccaacagcagcca
ggcggtccaactccacaggcccagccgcctcccggtcatggccagcagggtcaaccttca
ccatactcccagacaccccccctaccccagcagcagcaacagtcaccctatcagaggttc
ccccctcctccacaggaactttcccaggattcctttagctcccagtccaacgcttctgct
tccaaccaggccatggcctccagcaagagcagtcaggaagacagcatgcagacccgaccg
tccagcctgccggacctgtcggggtctattgatgacctgcccactggtacagaaggggcc
ctgagccccggcgtcagcacatccggagtttccagcagtcagggcgagcagagcaacccc
gcccagtcgcccttctctccacacacttctcctcacctgccaggtatccgtgggccctcg
ccatcacccgtgggttctccggccagtgtcaccccgtcacgcaccggcccgctgtccccc
gctgctgtaccaggtaaccaaatgcctcctcggccacccagcgtccagtctgacagcatc
atgcactcttccatgaaccagtcagccatgggccaagacagggtatacatgcgtaaccct
cagatgcccccttacgggtctcctggtcaccctggacaacctggttctgccttatctcca
cgccagtcttctggaggccagatgcatagtggaatgggaccgtatccccagaacaactcc
atgggaaactatggtcctcagggcgggcagtacggcccacaaggttaccccaggcagcct
ggctacacaggaatgcccaatgccaactaccccagtggccctgggatgggcgggaccatg
aacccaatgcccgctcagggcagtggggggccatatgggagcatcccaccaggcagactg
ggcccagggcagatgggtgctcggccctacggccccgggatgggcacaaacatgggtggc
atgcatcctcaggtgggctccggcatgtgtcctcctccgggcatgaacaggaaggacggg
ggcccctcgatgcaccatggacccacaaactccatacacaacaggccacctggctaccct
aacatgtcccagggcatgatgggagcaggctccccttacggccctggcatgaacagcatg
cacggaatgatgaaccaggggggcccaggaccgtacccgatgggcacaaatatggccaac
aacacccctgggatgcctccaaattcagagtttgggatggaaaaaatgaaccctgcccag
aagataaacaacaaggtcgacggcacgcccaagactgaatccaagaagaagtcgagctcc
tccaccatcaccagtgagaagatcacccgtctgtacgatctgggccaagagcccgagcgg
aagatgtgggtggatcagtacctggcgtttgctgaggagaaggccatgggcatgagcaac
ctgccggccgtgggacgcaaacctctggatctcttcagactctacgtgtctgtcaaacag
atcgggggtctcacacaggtcaacaagaacaaaaagtggagggagctggccaccaacctg
aacgtgggcacatcgagcagcgcagccagctcgctcaagaagcagtatatccagtgtttg
tacgccttcgagtgcaagatcgagcgtggcgaggacccgcccccggacttcttcaacacg
gacaccaaaaagagtcagccgaagatccagcctcccagcccagctggttctggatccctc
caaggaccccagactcctcagtccaccagtagttcaatggcagaggggggagacctgaag
ccccccaccccggcctccacaccacacacacaaatgcctccgatgcctggcgccaggagt
agcgttaatctacaggatccatttgctgatggcggcgatccagcgttttcaagaaggaac
gccatgactcccaactctcagggctaccagccaagcatgggtggcccagagatgatgggc
cgaatgggtccgtacgagtccaacaaggaccccttcggtggcatgaggaaagctggagaa
cagttcatgcagccagggcccaacagtgggatgggagaacaatacaacagaggcccgccc
gggccgatggctaacatgcagatgggtcagaggcaacagtatccgtatggatatgaccga
aggcaggagtcggggatgggccctgacggcagtatgggaccaggggctcctcagccaaac
atgatgccttctggagctgacccagggatgtactcacccagccgccctccgccacagcaa
cggcatgactcctatagcaatcagttccctggacaaggagctccccctggtggcccgtat
ccaaaccaacaaccaggaatgtatcctcagcagcagccgaactacaagcgacctgtggat
ggagggtacggacctccggcgaagcgtcacgagggtgaaatgtacaatgtgccctacagt
ggtcagcagcagccaggacctcagtcttcggggcctcagggccaacaggacatgtataac
cagtacaatgcataccctggtggggaccgcagaccaccgggcccacagaatcagttcccc
ttcccctttggtcgtgagcgaggaccatcgtccggaggccccaactctcagtctccaatg
cctccccaaatgatggcgagctccatgccttcaggtcccgatgggcctcaaggcccaatg
tggcagagccgcaatgaaatgggctaccccaactatccgaaccgacaggggcctcctgta
ccgggccagggccctgggtaccacggcatgaaccgctcagaggagatgatgccctcagac
caacgcatgaaccatgaaggtcagtggcccagccacgtcaaccagcgacagccaccgttc
ggccctggtgggtccggacctcccatgacccgacccctgccatccacctaccagacctcc
cagaaccacattcctcaggtgtccagcccagcacccatgccccggccaatggaaagcagg
acgtcgcccagcaagtccccctacatgcacccggggatcaaagtgcagaaagctggaccc
ccagtaccggcctcccacatcggccaggcgcccgtgcagcagcccatgatccgacgagat
gtggccttccctcctggctccgtggaggcctcacaacctcacctcaagccccgccggcgg
ctcaccatgaaagacatcggaactccagaggcctggagagtgatgatgtccctgaagtcg
ggcttgctggctgaaagcacctgggccttggacaccatcaacattttactgtacgacgac
aatagcatttctactttcaacctgtgccagctacctggattcctggagctggtggtggag
tacttcagacgctgcctcatagagatatttggcatcttgaaggagtatgaagtgggagat
cctggacagcgtaccctcatagaccccaatgctgctgaggactctgacaatgaccttccc
ctgccagagggcgatgggatggacttggtggaggacgacgaagaggacgaggaggtggag
gaatcaaaggccaatgctgacgcctcactggtccgcgtgaagcaggaagaggagagttcg
cagaaacacaagtgttcagaggacgaggaagaggacagcgaaagggagtctttgataaag
gaacctaacacctctacctcagggtcgtcccaagaccccggcctccattcagagaggccc
cgacaggctagtaaatttgataaactacccctcaaggtagtgaggaagaagaatcccttc
ctggtgaaccactcgtccaagctcggccagaggcagaactttgacagcggcctgatacac
tggagcatcggtggcggcgacactaccgaccacatccagacccacttcgagagccgggcg
gaccatctcaagcagcgaaaacgcaaacctgctgccacggagagtcgcaagaaggcccag
gtgacggaggccgtgacggaaaactcggagaaatccaactccggcctggaggagaagcct
cagcgacagcctcaatcctccggaccgcagaagtctccctcagagaaggcccctcctcct
ctcatcgccaccatcgacgacgtcctctccgcccgcccggggtccatcacagaggaagcg
gtccgcggcggtgccgaggaacagaaggagaacggcaagtacctgttcagcatcaaccca
gagctccagagcagacgcaacgtcaagatcctggaagacgagcctcacagcaaggacgag
acgccgctgagcacgctatcggactggcaggactcgctggcccgccgctgcatctgcgtc
tccaacatcgtgcgcagcctctccttcgtccccggcaacgacctggagatgtccaaacac
cccgggctgctgctgctgctgggccgcctggtcctgctccaccacaggcaccccgaacgc
aagcaggcaccggtcacctacgagaaggaggaggaggaggacgaaggcgtgagctgcgaa
agagacgagtggtggtgggactgcctggaggtgctgcgggagaactgcctggtcacgctg
gccaacatctcgggccagctggacctctccatctactcggagagcatatgcctgccgctg
ctggacggcctcctccactgggccgtgtgcccctcggcggaggccttggaccccttcccc
actctggggccgcacggctcgctctccccccacagactggtcctggagaccctcagcaag
ctcagcatccaggacaacaacgttgacctcattctggccacgccgccgttcagccgcctg
gagaagctgtacggctcgctggtgcgcctggtcggcgagcgcaaggtggccgtgtgccgg
gaaatggcggtcgtgctgctggctaacctggcgcagggcgacagcctggccgcgcgggcg
atcgccgtgcagaaaggcagcgtgggcaacctgctgggcttcttagaggacagcctagcg
gctacgcagtaccagcagagccagagctccctgctacagatgcagggcgggcctcagttc
gagcccaccagcgtggacatgatgcggcgtgcggcgcgggctctgcacgccctggcgaag
gtggaggagaaccactcggagttcacgttgtacgagtcgcggctactggacatctccgtg
tccccactaatgaactctctggtgtcccaggtgatctgtgacgtactgtttctgatcggc
cagtcatga
DBGET
integrated database retrieval system
