Takifugu flavidus (sansaifugu): 130518431
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Entry
130518431 CDS
T09160
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03320
PPAR signaling pathway
tfs04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130518431 (rxrba)
03320 PPAR signaling pathway
130518431 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130518431 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tfs03310
]
130518431 (rxrba)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130518431 (rxrba)
Nuclear receptors [BR:
tfs03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130518431 (rxrba)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
130518431
NCBI-ProteinID:
XP_056877005
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Position
21:11612654..11631490
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AA seq
548 aa
AA seq
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MCESRLWFRPTNPARASVRGLEFDSGLFGAGARRRVAANLGPVPASIMGDSRDSRSPDSS
SVSSPPSGQRSPPLVPSAAASMTSLPPITTTGVSSPISSIDSPFSVISSSMGSPCLPGTP
SVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQLSSHSQGPMLSQKRLCCICGDR
SSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCRYQKCLAMGMK
REAVQEERQRNKEREGEVESTSVVNEEMPVEKILEAEMAVEQKTELHADGSSGCSSPNDP
VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSISVKDGI
LLATGLHVHRNSAHSAGVGAIFDRAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRA
IILFNPGLYSSLSDFTIRHVLIGDLCRTTLSSSRVLSGSHHFYQDAKGLSNPSEVELLRE
RVYASLEAYCKQKYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM
LEAPHQLT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaaagccgtctttggtttcgcccaacaaacccggcccgggcctcagtccgcggt
cttgagtttgacagcgggctgttcggagctggagcacgtcggcgtgttgctgccaacctc
ggcccggtcccagcctccatcatgggagacagcagggattcccgtagcccagacagctcg
tctgtgtcctcccctccatcaggccagcgctcgcctccgctggttccctcagctgcagct
tccatgacctccctgcctcctatcaccaccactggtgtcagcagccccatcagtagcatt
gattccccgttttctgtcatcagctcttccatgggttccccatgtctacctggcacacct
tcagttggctatgggcccattagcagtccacagatcaactcaacagtttctatgtcaggg
cttcatgcagtgagcagctctgacgatgtgaaacctccgctgggcttgaagcagctgtcg
tcccacagccagggaccgatgctttctcagaaacgcctttgttgcatctgtggagacaga
tcctctggcaagcactatggcgtttacagctgtgagggctgtaaaggcttctttaagagg
acagtgcgcaaggatttgacctatacctgtcgggacaataaagactgcactgtggacaaa
agacagaggaaccgctgccagtactgccgttaccagaagtgcctggccatggggatgaag
agggaagctgtccaagaggagcggcagagaaacaaggagcgagaaggtgaagtggagtcg
accagcgtggtgaacgaggagatgccggtagagaagattttggaggcggagatggctgta
gagcagaagacggagctgcatgcagatggaagctcaggatgcagctctcccaacgaccct
gtcaccaacatctgccaggcagcagacaagcagctcttcacactggtggagtgggccaag
aggatccctcacttctctgagctacccctggatgaccaagtcatcctgctacgtgcaggt
tggaatgagctcctgattgcatcattctcccatcgctccatctcggtaaaggatgggatt
ctactggccactggtctgcatgtccacaggaacagcgctcacagtgcgggcgtcggcgcc
atctttgacagggcgcacaatgctgaggttggggccatatttgacagagttttgactgaa
cttgtaagcaagatgagggacatgcagatggacaaaacagagctgggctgcctgcgagcc
atcatcctgttcaacccaggcctttacagcagtctctctgacttcaccatcaggcacgtc
ttgatcggagacctttgcagaactactttgtcttcgtccagagtcctctctggatcacat
catttctaccaagatgccaaggggctgtccaaccccagtgaagtggagctgctgagggag
agagtgtacgcatctctggaggcttactgcaaacagaaataccccgatcagcagggcagg
tttgcaaagctcctcctccggctcccagcgctgcgctccattggtctgaagtgcctggag
cacctgttcttcttcaaactgattggggacacacccattgacaccttcctgatggagatg
ctagaggcgcctcatcagctcacctag
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