Takifugu flavidus (sansaifugu): 130518506
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Entry
130518506 CDS
T09160
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130518506 (tp53bp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
Tudor_3
DUF4537
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
130518506
NCBI-ProteinID:
XP_056877115
LinkDB
All DBs
Position
2:10007682..10020594
Genome browser
AA seq
1675 aa
AA seq
DB search
MDPGASELESSLPHSENPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPTSRSPVL
ELISSPPGSKNSQRDSQSESSQEKPDTLNDPNSESQQESQVLNICPPLNKKCAPEDMEST
ADSTTHCVQAEGGTSQFNFLELSQSQDLGGEVTNCQDQEDNIPPPDSEKHAKLGQNSDSR
TSGSQNNKAARAEVSSSSSLDSPVQSAQQVSVQVLLHSQCLQTSEQDQQDCEILSSQQDL
FETDKTGAAVDSTVSEPEQEGQPTLTPGQSLRLLHLSGQGTLVQESLSQSSIEFVAPSQN
SFTNTPFIVPSSPTGQENENSIDEPMDTSLPPEEKVREKEEPMDTETVSKPQPSASTPVF
QNSPCFTLEKTPSVPSQPEFSQNVFVPTQSQEAPSRCDQKPASESQCLDSCPFSLPLQLS
VNTESCSTALQNSQHAEEDSQATQIEEPEEPPAVDTSDSVAPHHQQANKTSAVPRLQTNT
SSKVSSAEEDKVDSESAEKTCMNVQQVDVKERSSAEVVSCSEMKDSCDVTVKSRVQETSA
NTPPRSLASQSVIPLTVTVDAMKSSALRGEKPAERLSVESSSQISVPVDGAQKGNDQGVM
AECEEEVMEEECTVGGESLGVALALSQSQLLTPEPMEDDSVVVVTDSEQDPEILQNDAAL
QVTTSTSQPVRGNALISTNGHEPQVPTTKVQMASSRLSQGEGAGPESEGLKDKSLSESSG
DISFHFTLPKEGDLIGPATGATPPLITQLKQTVRHSTPIEISPFDEKSDTAGDVSADVAM
AASAIVPGDSGENTADKGDGKLSLRMKLVTPVDEVNSDRFSLQKPSLQEEDGAPVKESTV
ASAVTSPSVFSRVRQVHRQKEEEDEAMSVRGELFASPQRSSQASSLGCNSLPYSQSEVLQ
QEVLASPQEIQKDPPDPVETSEDGQGPLRPPETAPAKANARQTFDQSNTSSPPIKLRHRT
NFSAPGLRSPAARSEAESPSSRRIPGPSHHRHVRTIKEVRTTITRIITDVYYEDGKEVER
KVSEESEDPVVDCQVLDSDMSPCRTGSSSLTSGDLGDISSLSSKASSLQHSSGGTSSSTG
LTRPDFIRPSSRGAKSSSPRRGGGHPQRGPRAHRVGSVVIAGRGHSTSGSQASIPLRPRG
RARRGRPPSRSRLSSRGGGHSLQRVSAQLPSSSDDELYTRVLPPQSPADTEPQGQSDSLR
SAEEEEEEEEEVGSPPGSSFVGLRVVAKWSSNGYFYSGRIMKDAGEGRFRLRFDDGYECE
VAGKDILLCDPIPLETEVTALLEDEYFSIGVVRGHKTEGQELFYSVEKDGQRQWYNRKAV
ILSLEQGNKLREQHSLGPYEPSTPLAKASDISLDNLVEGKRRRRGASENIPNRSSSSSPR
TPGPSGKRKLMTSEGCRTPAKRGRRGARAAQQRVGICNTSGSGTDLPDQSSDVVETHGPL
PQNASLFMGFAFMMTASCESDRLSNKLSSDEDEEYVQTGPYNKTYTESQLQAGGGFILPD
FNEEQCKAAYQSLLIADQHCRTQKYLLCLASGVPCVSHLWVRDCCKDNKLLNYRNYLLPA
GIGPDDAIVEWHPRSTPFKALRILLVFEKPAELWAQLITMGGASSVRHFQPDASDIPAGK
FDVVVTDHTCSPLVEKNMASQEVPLVSPEWLIQSVICGECLGFHSLPRYRHNYAS
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggaccctggagcaagtgaactcgaatcaagcttgcctcattctgagaacccgtgtctg
attgtagaggactcccagccggacagcgtcgctctggaggacgatcccgagagcagctac
cgagctctgctggcccgtcgactgtccagcctgcagcccacctcccgcagccccgtcctg
gaactcatatcctctccacctggaagcaaaaactctcagagggacagccagtcagagagc
tcccaagagaaacctgacactctgaatgatcccaactcagaatctcagcaggagagtcaa
gttctcaacatttgccctcctctcaacaaaaagtgtgcaccagaggacatggaatctaca
gccgattccacaacacactgtgtccaggccgaaggtggaacttctcagtttaactttcta
gagctatcacagagtcaagacttgggaggggaagtgacaaattgccaggaccaagaagac
aatatccctcctccagatagtgaaaaacatgccaaattaggtcagaactctgactccagg
acttcaggaagtcagaacaacaaagcagctagggcagaggtgagctccagcagctccttg
gactctccagttcagtctgctcagcaggtgagcgtccaggttttgctacactctcagtgc
ctccagacgtctgagcaggaccagcaggactgtgagatcctgtcttctcaacaggacctg
tttgaaactgacaaaacaggcgctgcagtagacagcaccgtttctgagcctgagcaggag
ggtcagcctactctgactccgggccaaagcctgcgactgctgcatctgtcaggacaggga
acattggtgcaggaaagtctgtcccagagctctattgagtttgttgcgccaagccaaaac
agtttcaccaacaccccattcattgttcccagctcacctactggacaagagaacgaaaac
agcattgatgaaccaatggatacctcgctgcccccagaagagaaagtgagggaaaaggaa
gaaccaatggacacagagactgtctccaagccccaaccgtccgcctccactcctgtattc
cagaattccccttgtttcacattggagaaaaccccctctgtgccctcccagcctgagttt
tctcagaatgtgtttgtcccgacacagagccaggaggcaccttcacggtgtgatcaaaaa
ccggcttcagaatctcagtgtctggactcgtgtccattctcattgcctttgcagctttct
gtgaacactgagagttgcagcacagccctgcagaactcccagcatgctgaagaggacagc
caggccacacagattgaagaaccggaggagcctcctgcagttgacaccagtgattctgtt
gcaccacatcaccaacaggcaaacaagaccagtgctgtcccaagattgcaaaccaacacc
agctccaaagtttcctctgcggaggaagataaagttgacagtgaaagtgccgagaagacc
tgtatgaatgtacaacaagtagatgtgaaggagaggagctctgctgaggtagtgtcctgc
tctgagatgaaggactcttgtgatgtgactgtgaagagccgcgtgcaggagacgtcagca
aacacgcctccccgcagtctcgcctctcagtctgtgatccccctgacagtaactgtggat
gcaatgaaaagttctgcactgagaggagaaaagccagcagagagactgtctgtggagtca
tcatcgcaaattagtgtgccggtcgatggcgctcagaagggcaatgaccagggagtaatg
gctgagtgcgaggaagaggtgatggaggaggagtgcacagtgggtggagagagtttagga
gtggctctggctttgtcccagagccagctcttgactcctgagccaatggaggatgacagt
gttgtcgtggttacagacagtgagcaagacccggagattctgcagaatgatgctgctttg
caggtcacgaccagcacctcccagccagtcagaggcaacgcgctcatctccacaaatggc
cacgaacctcaggttccaaccacaaaggtgcagatggcttcaagtaggctgtcccagggt
gagggggcagggcctgaatcagaggggctcaaggacaagagtctgagtgagagctcagga
gatatatcctttcacttcacacttcccaaagaaggggatctgattggtcctgccactggg
gccacgccccctctaatcacccagctgaaacagacagtgagacacagcactcccattgag
atttcacccttcgatgaaaagtcagacacagcaggcgatgtctccgcagatgtagcgatg
gcagccagtgccatcgtgcctggagacagtggggagaacacggcagataagggagatggg
aagctgagtttaaggatgaagctggtgacccctgtggatgaggtcaactcggaccgcttc
agccttcagaaaccgtccctacaagaagaagatggagccccggtgaaggaaagcacagtt
gctagtgctgtaaccagtccgtcagtgttcagccgggtcagacaggtccacagacagaaa
gaggaagaggatgaagccatgtctgtcagaggggagctgtttgcttcaccacagaggagt
tctcaggcttcctcactgggatgcaacagcctgccttacagccagtcagaggtcttacaa
caggaagtgttggcatcgcctcaggagatccagaaggatcctcctgacccagtggaaacg
tcggaggatggacagggcccactcagacctccagaaacggctccggccaaagccaatgcc
agacagacgtttgaccagtccaacacctccagtccacccatcaagctccgtcaccggacc
aacttcagcgctccggggctgcgctcaccagctgccaggtctgaagcggagtctccgtca
tccagaagaatccctggcccttcccaccacaggcacgtgcgcaccatcaaggaggtgcgg
accaccatcacgcgcatcattacagatgtttattatgaggatggcaaagaggtggagcgc
aaagtttcagaggagagcgaggaccctgtggtggactgtcaggtgctggacagtgacatg
tccccgtgtcgtacaggcagcagctctttgacgtcgggtgacctgggtgacatcagctcg
ctgtcctcgaaggcctccagcctgcagcacagctcaggaggaaccagcagcagcaccggc
ctcaccaggccagatttcatcaggccatccagtcgaggagccaaatctagcagtcccaga
cggggaggtgggcacccacagaggggtcccagggctcacagggtggggtcagtggtcata
gcgggcagaggccacagcacatcggggtcccaggcctccatccctctaagacccagggga
agggctcgaaggggtcgacccccttcccgctcccgcctgtccagcagaggtggtgggcat
tcgctgcagagggtcagcgctcagctgccatcgtcctcagatgatgagctctacacccgt
gtgctgccccctcaaagccccgctgacacagaaccccagggccaatctgactcccttagg
tcagcggaagaggaggaggaggaggaagaggaggtggggagccctcccgggagcagcttt
gttggcctgcgggtggtggccaagtggtcatctaacggttacttctactcaggccgcatc
atgaaagatgctggcgaggggaggttccgtctgagattcgatgatggctacgagtgtgag
gtggccgggaaggatatcctcctgtgtgaccccattccgctggagacggaggtcacagct
ctgctggaggacgagtacttcagcataggtgttgtgaggggccataaaactgagggccag
gagctgttttacagcgtggagaaggatggtcagagacagtggtacaacaggaaggctgtc
atcttgtctctagagcagggcaacaagctgagggagcagcacagcctgggcccctacgag
ccctccacccccctggccaaggcctctgacatcagcctggacaacctggtggaggggaag
aggaggcgcagaggagcatctgagaacatccccaaccgcagctcctccagcagcccccgc
acccccggcccctctggcaagagaaagctgatgacctcggagggctgcaggacaccagca
aagagaggccgcaggggggccagagccgctcagcagcgggtcggcatatgcaacacctct
ggcagcggaacagatcttcccgatcagtccagcgatgtggtggagactcacggcccgctg
ccccagaatgcatctctgttcatgggttttgccttcatgatgacggcgtcgtgcgagagc
gaccgtctgagcaacaagctcagcagcgacgaagacgaagagtatgtgcagacggggcca
tataacaaaacctacaccgagtcccagctgcaggctggtggaggcttcatcctaccagat
ttcaatgaagaacaatgtaaagcagcatatcagagcttgctgattgcagaccagcactgt
cgtacacagaagtacctgctgtgtttggccagcggcgttccctgtgtgtcacacttgtgg
gttcgagactgctgcaaagacaataagctgctcaactacaggaactacctgttgcccgct
ggcattggacctgatgatgccattgtagaatggcacccacgcagcaccccattcaaggct
ctgcggatccttctggtttttgagaaaccagccgagctttgggcccagctcatcaccatg
ggtggagcttcatccgtacgacacttccagcccgacgcctcagacattcctgccggcaag
tttgacgttgtggtgacggaccacacctgctccccactagtggagaagaacatggcatcc
caggaagtgccgctggtgtctcccgagtggctcatccagagtgtgatctgtggggagtgc
ctgggcttccatagcctgcctcggtatcgccacaactacgcgtcataa
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