Takifugu flavidus (sansaifugu): 130518563
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Entry
130518563 CDS
T09160
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfs03032
]
130518563 (recql4)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130518563 (recql4)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130518563 (recql4)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
130518563 (recql4)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
130518563 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
130518563
NCBI-ProteinID:
XP_056877246
LinkDB
All DBs
Position
21:complement(8248873..8257393)
Genome browser
AA seq
1512 aa
AA seq
DB search
MDRYNEVKVLLKNWEQEFVKEHRKKPTKEDIDQAPEETKGLYKEYRRLKQAKENSCKDTV
GRDQSGDAPEATAALKEPESWGAHLNRSAQPTPPPRLTSQERDSLKASAQYFGLKLKSNL
ALLTKDRPLSHKKSFHPGRVPLNSLKVEHGQASQGTAATTIDPLSPQNAAASLAPGTDQP
LASGDQYKPFDPVSDSFDDSFHTNCDNSKSSFKKTVGTDNVNVSGLNPSPAGASVPSSSL
ASPANVGIAKRDSAFKEDQQVFRGVRGIAARPSPVGRLSLIDTKWLERCQVFGEMETEVK
PGAGNQEKPPGMREEEVDRIAGNKEKDGLRDAGHSEGGEALKGHAPDEDVHKRRPKQSQQ
LMQENATDGQQESPETSLIPLANTEDKNKLKKNGDYTKKKGKKRQREGETMGGEVSEEGG
VKKRRRNAKKESSDGNPSPDQAGGKKRRVKKKDGETEEEKDTKLPKEDPKENLLGELEEE
YKTRRTRLSLPVRARNPNGPEGNFVKINLKKKSHVKGYALRGVGLRKQLYMQKFQLKGER
FGGGAGYFGRGRRGGFRGGFSRQGDTCYKCGETGHWAIDCKGRAPPPSAPEDPPAVEEPF
ELPTLEEVARATGTLRSGPLAASPGIAEEHEKNSGLNPADEVLLNVMRPDYERPAPPPPV
EPLYDLDDAGNVRGTPADVHAALRELGYQSFRPGQEEAIMRILSGLSTLVVLSTGMGKSL
CYQLPAYLYAKRSNSITLVISPLVSLMDDQLSGLPANLKAACIHSNMTMKQREAAVEKVK
SGQVCVLLLSPEALVGGGGSGSGCLPSAQELPPVAFACIDEAHCVSEWSHNFRPCYLRLC
KVLRERLGVQCFLGLTATATLSTALDIARHLDIRNQDGIAVRSAAVPPNLHLSVSMDREK
DQALVSLLKGERFDCLDSVIVYCTRREETVRVAALLRTCLQGVLVKENKQIKGGQDQNNP
VGRKKKELARKKIRKPLKWQAESYHAGLSAAERRRVQNNFMCGELRIVVATVAFGMGLDK
SDVRGIIHYNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDLHELRRHIYADTVDYY
TVKKLVQKVFPPCKCEQIQQKHQELAQEIEDSEMLKLLDVCDQGRSTTPRTQEHVSPAPS
RSQQTPASPAAGDQEEDHRSGAWEDEGGHWPSRRACHTHERAINIQETVEALDMTEEGVE
TLLCYLELHPQRFVELLHPTLSVCKISCYDGPRQLQKVTKICPPVAVVLARRRLAGERVE
TCDQLEFDVVEVADTMGWQLPLVKRGLRQLQWSTGKGGGRSGVLVEFSSLSFYFRSYGDL
SDEELDRVCQFLHNRVQKQEKTRLYQLTACFEAFKSVAFRTVSSCKDELDDGRSLRLKSL
LSEYFDKRCERSGVPAPEDCEGFDKYKVKPGKRIPNPPPPSGVGTNALSSVPAGFQILDW
EDQIRADIRGFLASRSDEKFSGRAVARILHGIGSPCYPAQIYAKDRRYWRKYIQFDFNQL
IRLATREIVGFK
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctacaacgaggtaaaggttttactaaaaaactgggagcaggagtttgtcaaa
gagcaccgaaagaaaccaaccaaggaggacattgatcaagctccagaggagaccaagggc
ttgtacaaagaatatcgaaggctaaaacaagctaaagagaacagctgtaaggacacagtc
ggtagggaccagtctggagacgcacccgaggccaccgcagccctcaaggaaccagaatct
tggggtgcccatctgaaccgaagtgcacagcccacaccacctcccaggttgacatcccag
gagagagatagtctcaaggcctctgcacaatactttgggctgaagcttaaaagcaatctg
gctttactcactaaggatcgacccctttcacataaaaagtcatttcatcctggtcgtgtg
cctctaaactctttgaaagtggaacatggacaagcctctcaagggactgctgccactaca
atcgacccactctcaccacaaaatgcagcagcttcgctagcgcctggaacagatcagcca
ttggcgtctggagatcagtataaaccctttgatcctgtctcggactcctttgatgactct
tttcatacaaactgtgataatagtaaaagcagctttaagaagaccgtgggcacagacaat
gtgaatgtctctggtctgaatccttctccagctggagcttctgtcccatcatcatcttta
gcctctccagctaatgtgggaattgcaaaaagagattctgcttttaaagaagatcaacag
gttttcagaggagtgagaggcattgcagcaagaccatcccctgttggcagactgagtcta
atagacacaaagtggttagagaggtgtcaagtgtttggagagatggagactgaggtgaag
cctggagcaggaaaccaggagaaacctccaggcatgagggaagaagaggtggacagaata
gctgggaataaagagaaagatggattaagagatgcaggacattcggaaggaggtgaagcc
ctgaagggccacgctcctgatgaagatgtccacaaacgtagacccaaacagtctcaacaa
ctgatgcaagaaaacgcgaccgatgggcagcaggaatctcccgaaacatcactgatccct
ttggcaaacacagaggataagaataaactgaaaaaaaatggtgattacacaaaaaagaaa
ggaaagaaaaggcaaagagagggagaaaccatgggtggagaggtgtcggaggagggcggg
gtaaaaaagaggcgccggaacgccaagaaggagagctctgatggaaacccgagtccagat
caggcaggaggaaagaagaggagagtcaagaagaaagatggagagacagaagaagagaaa
gacaccaagctgccaaaggaggatccgaaggagaacttgttaggagaactagaggaggaa
tataaaaccagaagaacacgtctgtctctgcccgtcagagcaagaaacccaaacggtcca
gagggtaactttgtgaagataaatctgaagaagaaatctcacgtgaaaggttatgcgctg
cgaggcgtcggcctccgtaagcagttatacatgcagaagttccagctgaaaggggagcgc
ttcggaggaggtgctggatactttggcagaggaaggaggggtggattcagagggggcttc
agccggcagggggacacctgctacaagtgtggagagacgggacactgggccatcgactgc
aagggacgagcacctcccccctctgctcctgaagaccccccagctgtcgaggaaccattt
gaacttcccacccttgaggaggttgccagggcaacgggaacactgcgatctgggcccttg
gcagcgtctcctggtattgctgaggaacacgagaaaaacagtggccttaatcctgcagat
gaggttttgttaaacgtgatgcgtcctgactacgagcgtccggctccgcctccgccagtc
gagccgctttatgatctcgacgatgccgggaacgttcggggaaccccagccgacgtgcat
gccgccctgagagaacttggctatcagtcttttagacctggacaagaggaagccatcatg
aggatcctgtcagggctttccaccctggtggttctgtccacagggatgggcaaatccttg
tgctatcagctcccagcctacctgtatgctaaacgatccaactccatcactttagtcata
tcgcctcttgtgtcgctaatggatgaccagctgtctggtctgccggccaatctgaaggca
gcttgtatccactccaacatgacgatgaaacagagagaagctgctgtagaaaaggtgaaa
tcagggcaggtgtgtgtgttgctcctctctccagaagctcttgttggtggaggcggctca
ggctctgggtgcctgccctctgctcaagagctcccccctgtggcctttgcgtgtatagac
gaagctcattgtgtttcagagtggtctcacaacttcagaccctgctatctaagattatgt
aaggtattaagagaacgattgggagtgcagtgttttctgggactcacagccacagctaca
ctatccacggccctggacatcgcacgccatctggacatcaggaaccaagacggcattgcg
gtccgatcagccgcagtgcctccaaacctgcatctgtccgtgtccatggaccgggagaaa
gaccaggcgttggtgtcgctgctgaaaggcgaacggttcgactgcctggactccgtcatc
gtgtactgcaccagaagagaggagacggttcgcgtagcggccctgttgcggacctgcctg
cagggcgtgttggtgaaagagaacaagcaaatcaaaggcggtcaggaccaaaacaaccca
gtgggacggaagaaaaaagagttggcaaggaagaagatccgcaaacctctgaagtggcag
gctgagtcctaccatgcgggcttgtctgcagcagagcgccggcgtgtgcagaacaacttc
atgtgcggggagctccgaatcgtggtggccaccgttgccttcgggatgggcctcgataaa
tccgacgtccgcgggatcatccactacaacatgcccaagagctttgagagctacgtgcag
gagattgggagagcgggaagagatggagaaccggcacattgtcatttgtttttggaccct
gagggcggggacctccacgagctccgtcgtcatatctatgcagacacggtggactattac
acagtaaagaagctggttcagaaggttttcccaccatgtaaatgtgagcagatccagcag
aaacaccaggagctcgcacaggaaatcgaggactcagaaatgctgaaactgctggacgtg
tgtgaccaggggcgcagcacgacccccagaacccaagagcacgtcagtcccgccccttcc
cgctcacagcagaccccagcctctcctgctgcgggagaccaagaggaagaccatcgctcg
ggggcttgggaagacgagggcggccactggcccagtcggcgagcgtgtcacactcacgaa
cgagccatcaacatccaggaaacggtggaggctttggacatgacggaggaaggtgtggag
acgctgctctgctacctggagctgcacccccagcgcttcgtggagcttctgcacccaaca
ctgtctgtctgtaagatcagctgctacgacgggcccagacagctccagaaagtcaccaaa
atttgccccccggttgccgtggtgctggccagacggcggctagctggggagcgggtggag
acgtgcgaccagctggagtttgacgtggtggaggttgcggacactatgggctggcagctt
cctctggtgaagaggggtctcaggcagctgcagtggagcactgggaaaggcggcggacgt
agcggcgtcctcgtggaattctcctcactgtccttctacttccgttcctacggcgacctg
agcgacgaggagctggacagagtttgtcagttcctccataatcgggtgcagaagcaggag
aagactcggctgtaccagctgaccgcctgtttcgaggcattcaaaagcgttgccttccgg
actgtctcgtcctgcaaggacgagttggacgacggtcgcagcctccggctgaaaagtctt
ctgtctgaatactttgacaaaaggtgtgaacgaagcggcgtccctgctccagaggactgt
gaggggtttgacaaatacaaggtaaaacctgggaaacgcatcccaaatcccccccccccc
agtggtgtgggtacaaacgcgctctcctctgttccggctggttttcagatcttggactgg
gaggatcagatcagagccgacatcagaggttttcttgccagcagaagtgatgagaaattt
tctggcagagctgttgccagaatcctgcatggaatcggaagtccctgttatcccgctcaa
atttacgcgaaggacagacgctactggaggaagtacatccagtttgacttcaaccagctc
atcagactggccacgcgggagatcgtcggcttcaagtga
DBGET
integrated database retrieval system
