Takifugu flavidus (sansaifugu): 130519015
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Entry
130519015 CDS
T09160
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130519015 (mkrn1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130519015 (mkrn1)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130519015 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
130519015
NCBI-ProteinID:
XP_056878014
LinkDB
All DBs
Position
22:9779044..9788109
Genome browser
AA seq
429 aa
AA seq
DB search
MAEAAVASTVTLPVTGGWTKHVTCRYFMHGLCKEGDNCRYSHDLTSSKPAAMMCKFFQKG
NCVFGERCRFEHCKPTKSEEVSNPQMLLLSSTPPSIDPECSESGPRLKTQDWANAAEFVP
GQPYCGRAESVDVEISIPLIEELNGDATTDKEELRKQLCPYAAVGECRYGVNCAYLHGDV
CDMCGLQVLHPTDSSQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKVNPS
ERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKEDKQ
KLIQKYKDGMGRKPCRYFDEGRGICPFGANCFYKHAFPDGRLEEAQPQRRQTGSSSRNRN
SRRTQLWDIIDERESTGSLDNDDEEMVTFELSEMLLMLLAAGNDEEVTDSEDEWDLFHEE
LDDFYEIYL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagtcgcatctacggtgactttaccagtgaccggggggtggaccaaa
cacgtaacctgcaggtatttcatgcacggtctgtgcaaagaaggggacaactgtcgctat
tcgcatgatctgaccagcagcaaacccgcagccatgatgtgcaagttcttccagaaggga
aactgtgtgtttggggagcgatgcaggtttgaacattgtaaaccaacaaagagcgaggag
gtctcgaacccccagatgttgctattaagctccaccccaccgtcgattgatccagaatgc
agtgagtcaggccctcgcctgaagactcaggactgggccaatgctgccgagtttgttcca
ggacagccttactgtggccgggctgagtcggtggatgtggagatctccatccctctcatt
gaagagctcaacggtgatgccaccactgataaggaagagcttcgaaagcagctctgccca
tatgctgctgtaggagagtgccgctacggcgtcaactgtgcgtacctgcacggggatgtg
tgtgacatgtgtggcctgcaggtgctccaccccaccgatagcagccagcgctccgagcac
accaaggcctgcatcgaggcccatgaaaaggacatggagatctcgtttgccatccaacgc
agcaaagacatgatgtgcggcgtgtgcatggaggtggtgtttgagaaggtcaatcccagc
gagcgacgcttcggaatcctctccaactgcagccactgctactgtctgaagtgcatccgc
aagtggaggagtgccaagcagttcgaaagcaagattatcaagtcttgtccagagtgtcga
atcacctccaactttgtcatcccaagtgaatattgggtggaagataaagaagacaaacag
aagctcatccagaaatacaaggatggaatggggaggaaaccctgtcgatactttgacgag
ggtcgtggaatttgccctttcggtgccaattgcttctacaaacacgcctttcctgatggt
cgtctggaggaggctcagccacagcgaagacagactggatccagcagcaggaaccggaac
tccaggaggacacaactgtgggacatcattgacgagcgggaaagcaccggttccctggac
aatgacgatgaggagatggtgacatttgagctgagcgagatgctcctcatgctgctcgct
gcaggaaatgatgaagaggtgacagattcagaggatgagtgggacttgtttcacgaggag
ctggacgatttctatgagatttacctatag
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integrated database retrieval system
