Takifugu flavidus (sansaifugu): 130519094
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Entry
130519094 CDS
T09160
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04510
Focal adhesion
tfs04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130519094 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130519094 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
M-factor
Motif
Other DBs
NCBI-GeneID:
130519094
NCBI-ProteinID:
XP_056878171
LinkDB
All DBs
Position
22:6391398..6404713
Genome browser
AA seq
1773 aa
AA seq
DB search
MSPVILVLTTLALCCSVRALLPELANVCTEGSCYPATGDLLIGRAHRLVASSTCGLRRPE
HFCIVGHLEEETKCFMCDSRDMYEEDSNPNSHTIENVVTTFGPNRFKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSMDRGATWQIYRYFASNCEASFPGVSTGPL
AKVDDIICDSRYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVNFTKLNT
LGDNLLDFRDEVTAKYYYSLYDIVVRGNCFCYGHASECQPIHEPPPGKEGMVHGHCVCKH
NTDGVNCERCQDFYNDLPWKPAVGRSTHTCKKCECNQHTTECHFDMAVYMTTGNVSGGVC
DDCKHNTVGRQCEQCAPFYYQHPNRDLRDPNVCEPCNCDPSGSLQGGLCDARTDVVAGLL
SGQCRCKANVEGERCDNCRQGYFGLGRGPDGCLPCTCNPLGTLPRGNPCDSHTGSCFCKR
LVEGYACDQCVAEHWGLSNDMDGCRPCDCDHGGALNNNCDPQSGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVKLVPRPYPLDRRPTWTGMGFVNMPEGTYLEFTVDN
IPESMDYDILVRYEPQLPDQWEKVSIQVQRPGESGHCRNSIQSGDQQSISLPPGSRHVLL
LNPVCFEEGLSYTVRLSLPLYSSVRYIQNPYTLIDSLVLIPRLREMDMFHGVEGEGAWDT
FQRYRCLESSHSIIKSPITEICNSYIFSVSALLHKGAMACQCDPQGSLSALCETSGGQCQ
CRPNIRGRNCDSCAPATYQFSPSGCRACECDPRGSVSSFCHETTGQCTCVPGATGRQCSH
CLPGHWGFPQCRPCHCNGHSDYCHPQTGQCQSCRDFTTGHHCERCLDGYHGDPELGSGDH
CRPCMCPDGPQSGRHFSDSCYVLAQRLVCVCSPGYRGPKCDQCAPGHFGNPLVPGGRCVP
CQCNDNIDMHDPQSCDAQTGACIRCLYHTEGYACQHCKAGYYGNAVAQSCRKCMCDSVGT
LPRACSSPEECECNQHSGQCPCKSNVIGQNCDRCAPDTWNITSGTGCQKCNCDPVHSFGS
SCNEVTGQCSCKPGFGGRTCRECRELFWGDPKVKCHACDCDPRGISSEQCHRATGQCTCV
EAASGPRCDQCARGYQGQFPACEPCHQCVAVWDVVVGELTNQTRRLEVQIAELQSSGVTA
PYKELISSLEKNAKAVRDIVESNPASAKLEEIKELMHQITGMMSFLTGELNTTEETLLLL
HGDANATEVNLDSLTEGIIQLELSIKDLREQVYNVKNANIQGALDTISTAHAQSTMAESL
VNASTSNPGSTVNQSAASRQATEEKMSSSSKEFDRKHQRNVKKLDKLSEELDQFNLTALS
EQTCGGAAEGDSCSGSHCGGLGCTGEDGGPRCGGEGCKGFVTASKTALKSAKDLDQDILA
AMQEVDKLSSMVWEAKKRANEAKANAMEVLIKSNRSKERVEQSNEQLRDLIKEIRDLLTN
ERANVSVIEAVANEVLALEMPTSVEKLNELTKEIKEKVNALTSVDTILSQSAEDVSAAEV
LLKEAMAASEQASTLKETIEAAQAALNESERAQNVAMDAIQLAQNNTKTTLDLLVSVESE
TATSELKLSNTTGRLLLLEREVGLLRQNSLEVNRLEETAKVISEQAKVNAEEAQKEFDVE
LKNKLEEVEDLVEDKGDMVLQGTRRADKLQQEAKELLAQSREKLQRLEELEKAYESNQQI
MEKKAEELVELEKAARQILEEIGYKVTLYSTCL
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgtaatcctcgttctgacaactttggccctgtgctgctccgtgcgggcgctg
ctgccggagctggcaaatgtgtgcacggagggcagctgctaccccgccacaggtgacctg
ctgatcggccgggcgcaccggctggtcgcctcctccacctgcggcctgaggcgcccggaa
cacttctgcatcgtcgggcacctggaggaggagacaaaatgctttatgtgcgactcccgg
gacatgtatgaggaagacagcaaccccaacagccacacgatcgaaaatgtggtcaccaca
ttcggccccaaccgcttcaaaacctggtggcagtcggagaacggtgtggagaacgtgacc
atccagctggacctggaagccgagtttcatttcacacatcttatcatgaccttcaagact
tttcggcccgctgccatgttgatcgagcgctccatggaccgcggggccacgtggcagatt
taccgctacttcgccagcaactgtgaggcgtccttccccggcgtgtccacggggccgctg
gccaaagtcgacgacatcatctgcgactcccgttactcggacatcgagccgtccacagag
ggggaggtgatatttcgggtgctggaccctgcgttcgagattgaagacccttacagcctg
agaatacagaacatgctgaagatcacaaacctccgggtaaacttcacgaagctcaacacg
ctgggcgacaacctactcgatttccgtgacgaggtgacggcgaaatactactactccctc
tacgacatagtcgtccgtggcaactgcttctgctatggccacgcttccgagtgccagccc
atccacgaacctccgcctggaaaagagggcatggtccatggacattgtgtctgtaaacac
aataccgatggtgtaaactgcgaacgctgccaggacttctacaacgatctgccatggaaa
ccagcagtggggcgaagcacacacacctgcaaaaagtgtgagtgtaaccaacacaccacg
gagtgccactttgacatggctgtgtacatgacgactggcaacgtgagcggaggcgtgtgc
gatgactgtaaacacaacacggttggacgacagtgcgagcagtgcgcccccttctactat
cagcaccccaaccgagacctgagggaccccaatgtgtgcgagccgtgcaactgtgacccc
agcgggtccctgcagggtggactgtgcgacgcgcggacagacgtggtggccgggctcctt
tcaggccagtgtcggtgcaaagctaacgtggagggagagcgttgcgacaactgcagacaa
ggttactttggattgggacgcgggccggacggctgcctgccatgtacatgtaacccactg
ggcacgttgcctcgagggaacccctgtgactcacacacaggaagctgcttctgcaagcgc
ctcgttgagggatacgcctgcgaccagtgtgtggcggagcactggggcctgtccaatgac
atggacgggtgcaggccatgtgactgcgaccacggcggcgctctgaacaataactgtgac
cctcagtcggggcagtgcgtatgccgggagcacatgttcggacgacgctgcgaccaggtg
gagtccggtttctacttcatcgctctggatcactacacctacgaggccgaggacgccaag
cacggacctggggttaagctggtccccagaccttatcctctggatcgcaggcctacctgg
accggtatggggttcgtcaacatgcccgagggaacttacttggagttcaccgtcgacaac
atcccagagtcgatggactacgacatccttgttcgctacgaacctcagttgccagaccag
tgggagaaagtgagcatccaagttcagcgtcccggcgagtcgggtcactgcaggaactcc
atccagagcggagaccagcagtccatctcgctgccgccggggtccaggcacgtgctgctg
ttgaatcccgtgtgcttcgaggaaggtctgagctacacggtccgcctcagcctaccgctc
tactcctccgtcagatacatccagaacccgtacacgctcatcgattcgttggtgctgata
ccccggctaagagagatggacatgttccacggggtggagggcgagggggcgtgggacacc
ttccagcgctaccggtgtctggaaagcagccacagcatcatcaaaagccccataacggag
atctgtaacagctacatcttcagcgtctcggctctgcttcacaaaggagccatggcatgc
cagtgtgaccctcagggctcgctaagtgcattgtgtgagaccagcggcggccagtgtcag
tgccgacccaacatcaggggcaggaactgcgacagttgcgccccggccacttaccagttc
agcccctccggctgcagagcgtgcgagtgcgacccccgggggtcagtgagctccttctgc
cacgagacgacgggccagtgcacgtgcgttccgggggctacggggcgccagtgttcgcac
tgcctgccgggtcactggggcttcccccagtgccgaccatgtcactgtaatggccacagc
gactactgccacccccagactggacagtgtcagagctgcagagatttcaccaccggacac
cactgcgagaggtgtctagatggttaccacggtgatccagagttggggtcaggtgatcac
tgccgcccctgcatgtgtcccgacggcccgcaaagtggacgtcacttctccgacagctgt
tatgtcttggctcagcggctggtgtgtgtgtgcagtcccggctacagaggccccaagtgc
gaccagtgcgctccgggtcacttcgggaaccctctggtgcccgggggccgctgcgtgccc
tgccagtgcaacgacaacatcgacatgcacgatccccagtcatgtgatgcccagacgggt
gcctgtatcaggtgcctgtaccacaccgagggctatgcgtgccagcactgcaaagcgggt
tactacggcaacgctgtcgctcaaagctgtaggaagtgcatgtgtgactccgttggcacg
ctcccccgggcctgttcgtcccccgaagaatgtgaatgcaaccagcacagcggccagtgt
ccctgcaaatcaaatgtgatcgggcagaactgcgaccgctgcgctccggacacctggaac
atcaccagcgggacgggctgccagaagtgcaactgcgaccccgtccactcttttggatcc
tcctgcaacgaggtcaccggacagtgctcgtgcaaacccggcttcggcggcaggacatgt
cgggaatgcagggagctgttctggggagatccaaaggtcaaatgtcatgcttgcgattgc
gacccacgtggaatctccagcgagcagtgccatcgcgccaccggccagtgcacgtgtgtg
gaggcggcgtctggcccacgctgtgaccagtgtgccaggggctaccagggccagttcccc
gcctgtgaaccctgccaccagtgcgtcgctgtctgggatgtggttgtcggggagctgacc
aatcagacgcggcgcctggaggtgcagatagccgagctccaaagcagcggcgtgaccgct
ccctataaggagttgatcagcagcctcgagaaaaacgccaaggctgtcagagacatcgtg
gagagcaaccctgcctcggcgaagctggaggagataaaagagctgatgcatcagattaca
ggcatgatgtccttcctgaccggagagctgaacacgacagaagagaccttgctgctcctc
catggtgacgccaacgccaccgaagtaaacctggactcgctgacggagggcatcatccag
cttgaactgagcatcaaagacctgagagagcaggtttacaacgtcaagaacgccaacatt
cagggtgccttggacacgatttcaaccgcacacgcgcagtcaacgatggcggagagcctc
gttaacgcttccaccagtaatccaggaagcaccgtgaatcagtcggccgcgtcacgccag
gccacggaggaaaaaatgagcagcagcagcaaagagttcgatcgcaagcaccaaagaaac
gtgaagaagctggacaaactgtcagaagagctggatcagttcaacttgacggctctcagc
gaacagacatgcggtggcgcagctgaaggtgatagctgctctggctcccattgtggtggt
ttaggttgtaccggtgaagatggaggacctcggtgcggaggagagggatgcaaaggcttt
gtgacagcgtcgaaaactgctctaaaatcagccaaagacctggaccaggacatcctagca
gcaatgcaggaggtggacaagctttcctcgatggtgtgggaggccaagaaacgtgcgaat
gaggctaaagctaacgccatggaggtgctgatcaaatccaaccgcagcaaagagagagtg
gaacagagcaacgagcaactgcgagacctcatcaaagagatccgagacctgctgacaaat
gaaagagcgaacgtctcagtgattgaggccgtcgctaacgaggtgttggcccttgagatg
cccacatcagtggaaaagctgaacgagctaaccaaggagatcaaggagaaggtcaacgct
ctgaccagcgtggacacgatcctcagccagagcgccgaagacgtctcggctgctgaggtg
ctgctgaaagaggccatggctgccagtgagcaggcgtcaaccttaaaggagacaatagag
gcggcgcaggcggcgctgaacgagagtgaacgggctcagaacgttgccatggacgccatc
caattggcccagaataacaccaagaccacactggacctgctggtctctgtggagtcagag
acggccacgtcagagttgaagctcagtaacaccacaggacgtctgctcctgctggagagg
gaggtgggcctgttaagacagaacagcctggaggtgaaccggctggaagagacggccaaa
gtgatcagcgagcaagccaaagtgaacgcagaggaggcccagaaggagtttgacgtggag
ctgaagaacaagttggaggaggtggaggatctagtggaggacaaaggggatatggtgctg
caggggacgaggagagcagataaacttcagcaggaggccaaagagctgctcgcccagagc
cgcgagaagctgcaaagactcgaagaattggagaaggcctatgagtcgaatcagcaaatc
atggagaagaaggcggaggagctggtggagctggagaaggcggctcgtcagatcctggag
gagatcggctacaaagtgacgctgtacagcacttgtctgtga
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