Takifugu flavidus (sansaifugu): 130519181
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Entry
130519181 CDS
T09160
Symbol
snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130519181 (snrpf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130519181 (snrpf)
03041 Spliceosome [BR:
tfs03041
]
130519181 (snrpf)
03032 DNA replication proteins [BR:
tfs03032
]
130519181 (snrpf)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
130519181 (snrpf)
Spliceosome [BR:
tfs03041
]
Complex A
U1 snRNP components
Sm proteins
130519181 (snrpf)
U2 snRNP components
130519181 (snrpf)
Complex B
U1 snRNP components
130519181 (snrpf)
U4/U6.U5 tri-snRNP components
130519181 (snrpf)
Complex C
U2 snRNP components
130519181 (snrpf)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130519181 (snrpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
130519181
NCBI-ProteinID:
XP_056878361
LinkDB
All DBs
Position
22:6498353..6500417
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEFVDGALAGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgttgaaccccaaaccattcctgaatggcctgacaggcaaaccagtgatg
gtgaaactaaagtggggaatggagtacaagggctacctggtgtctgtggacggctacatg
aacatgcagctggcaaacacggaggaatttgtggacggagcactggcagggcatctcggt
gaagttctgatcaggtgcaataatgttttgtacatcagaggtgtagaagaagaggaagaa
gatggagagatgagagagtga
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