Takifugu flavidus (sansaifugu): 130519400
Help
Entry
130519400 CDS
T09160
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130519400 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130519400 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tfs00537
]
130519400 (cntn1b)
Cell adhesion molecules [BR:
tfs04515
]
Immunoglobulin superfamily
Contactins
130519400 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tfs00537
]
Others
130519400 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_6
Sp38
Pur_ac_phosph_N
Ig_4
Motif
Other DBs
NCBI-GeneID:
130519400
NCBI-ProteinID:
XP_056878783
LinkDB
All DBs
Position
22:3032661..3041835
Genome browser
AA seq
1040 aa
AA seq
DB search
MAAAALLLLGLSACSSLTDAILFGEPRIYGDDATGYGPIFEEEPVDVVYTEDSPDGRISM
NCRARANPPASYRWRRGNWEIKLMEQPDEHYSLVGGNLVINNPKKKHAGVYICVARNTYG
TVISKEAQLKFGYLEEFPQEERDPVRVKEGQGAVLLCAPPNAWPEEVTYRWIFNEFPVFL
NTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPMIGRSVFSKFISLIPLVPEEGERKY
PADIRVKFQDTTAMLASNITLECFALGNPIPHIVWRKVDATDLPPNHEISESGAVLHLYN
VQYDDVGGYECEAINTKGKDWHKAWVYVESAPEWAETINNTQIDIGSAHSMRCVAMGKPF
PFIRWYKDGYMYGKGELKFSSLTFTDSGMYQCIAENFWGIKYANAELRVITCAPTFEFNP
VKKQLLGARDGRVVIECKPRAAPRPQFRWMKGKELLFNNSRISILFDGSLEIRNATKNDE
GVYTCFAENSKGKANSSGYLTITEATSITVAPEDSEVKVGEEVVLRCAASFDPMLDITFI
WAIDFRVIDFDSEWQHYERLWRDDGSGDLRVKNAQIWHEGRYTCTAQTVVDSDVAYADLK
VVGRPGPPGVIRVEEIGNTWVKLRWTKGADHNSPILYYTIQTRHYWALNEDDWRNASTSP
AFLDGSVERAEVTDIYPWLEYQFRIIATNEHGSGEASIPSLKIKTWDAAPVVSPTNVAGY
GGRNGEIVITWTPVEPWHFYGKSFGYIVAFKPHDAYDWWYETISDPETRRYVHRDSYFIP
TEEDFQVREFQVKIKSFNVKGDGPYSLTQVIYYPRDVPTEPPTDVYARPVSSTEALVWWL
PVVDTGTSLQQYIEGYQVKYWRKYDDPEPGANRIFVPATVNQTRLENMLPDAHYLIEVRA
FNGAGLGPPGEHCEMFTKRAPPPEPPRMWRYISWTGKWLYVWWDHIQYDWFGNISFPLYY
KVMFRKTGYIYGKVYITGWHFMDFPMPQVGDFELMVRGRYEGGDGPVRKIRIQGKAATME
PSLSLLALVLLALCIVGLQI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcgttactgctcctgggtctctccgcctgctcgtctcttacagatgcc
atcctgttcggagagcccaggatttatggagatgatgcaactggatacggacccatattt
gaggaggagccggtggatgtggtctacaccgaggactcacctgatgggagaatctccatg
aactgcagagcaagagcaaacccgcctgcttcatacaggtggcgccgggggaactgggag
atcaagctgatggagcagcctgatgaacactacagccttgtgggggggaatctggtgatc
aacaaccccaagaagaaacacgctggggtatacatctgcgtggccaggaacacctacggc
accgtcatcagcaaggaagcccagctcaagttcggctatttggaggagtttcctcaggag
gaaagagacccggtgcgtgtcaaagagggacagggcgcggtcctgctgtgtgctcctcct
aatgcatggccagaggaggtcacctaccgctggatcttcaatgagttccccgtcttcctg
aacaccgatcgcaggcgcttcgtctcccagaagacggggaacctttacatctcgaaagtg
gaagctcaggacgccggaaactactcctgcttcgtttccagccccatgatcgggaggagc
gtcttctctaagttcatctcgctcatccccctagtacctgaagaaggtgagagaaagtac
ccggcagacataagggtaaagtttcaagacaccaccgccatgctggcgtctaatatcacc
ctcgaatgcttcgcgctcgggaaccccatacctcacatcgtttggaggaaggtggacgcc
acagacctcccgccaaaccacgagatcagcgaatcgggcgccgtgctccatctgtacaac
gtgcagtacgacgacgtgggcgggtacgagtgcgaggccatcaacacaaagggaaaggac
tggcacaaggcttgggtctacgtggagtctgccccagagtgggcggaaaccatcaacaac
actcagattgacatcggttcggcgcacagcatgcgctgtgtggcgatggggaagcccttc
ccattcatccggtggtacaaagatggatatatgtatgggaaaggggagctgaagttttcc
agtctgacttttaccgactccggaatgtaccagtgtatcgctgaaaacttctggggcatc
aaatatgccaacgccgagctgcgagtcataacgtgcgctccgacgttcgagttcaaccct
gtgaagaagcagctcctcggagctagagatggtcgcgtagtgatcgagtgcaaaccccga
gctgcccctcgaccacagttcaggtggatgaagggcaaagaattgctcttcaacaattcc
cgcatctccatcctgtttgatgggagcctggaaatccgcaacgccaccaagaacgatgag
ggcgtctacacgtgcttcgctgagaacagcaaagggaaggccaacagttctggctacctc
accatcacagaggctaccagcattactgtagcccccgaagactccgaggtgaaggtcggc
gaagaggtggttctgaggtgtgcggcgtcattcgacccaatgctggacatcaccttcatc
tgggctatagacttccgggtcatcgactttgactcagagtggcagcactatgagcgtctt
tggcgcgatgatggcagtggcgatctgagagtaaagaacgcccaaatctggcacgaaggg
cgctacacatgcacggctcaaacggtggtggacagcgacgtggcatacgcggatctaaaa
gttgtaggaaggccagggcctcccggtgtgatccgtgtggaggagatcgggaacacatgg
gtgaagctgcggtggaccaaaggggcggatcacaatagccccatcctctactacaccatc
cagaccaggcactactgggctctgaacgaggatgactggaggaatgccagcacctctcca
gcttttctcgacggcagcgtggagagggcagaagtgacagatatatacccctggctggag
taccagttcagaatcatagccaccaatgagcacggctccggagaggccagcatcccgtcc
ctcaagatcaaaacctgggacgctgctcctgtggtttcccccaccaatgtagctggttac
ggaggcagaaacggcgaaatcgtcatcacgtggacacctgttgagccatggcatttctat
ggcaagtcgttcggctacatcgtggcgttcaaaccccacgacgcttacgattggtggtac
gagaccatttcggaccccgagacgaggcgctacgtccacagggactcttacttcatcccc
actgaggaagacttccaggtccgagagtttcaggtgaagattaagtcatttaacgtcaag
ggcgacggaccctacagcctcacccaagtcatctactacccaagagatgtaccaaccgag
cctccaacagatgtgtacgccagaccggtgtcctccacagaagctctggtctggtggctg
ccagtggtggacactgggacgagcctccagcagtacatcgaagggtaccaggttaagtac
tggaggaagtatgatgatccagagccgggagcaaaccgcatatttgtccccgccacagtc
aaccagactcggttggagaacatgctgccagacgctcattacctcatcgaggtccgcgct
tttaacggcgcgggcctgggaccacccggagagcattgtgagatgttcacaaagcgagca
ccaccaccagaacctcccaggatgtggcgctatatctcctggaccggaaaatggttgtac
gtgtggtgggatcacatccagtacgactggttcgggaatatctcattcccactgtactac
aaggtcatgttcaggaaaacgggctacatctacgggaaagtttacatcaccggctggcac
ttcatggacttccccatgcctcaggtgggagattttgagctgatggttcgcggccgttac
gaaggtggagacggcccagttaggaagatcaggattcagggtaaagcagctacgatggag
ccgagcctcagcctcctggccctggtgctgctggcgctgtgcattgtgggattgcagatc
taa
DBGET
integrated database retrieval system
