Takifugu flavidus (sansaifugu): 130519417
Help
Entry
130519417 CDS
T09160
Symbol
lum
Name
(RefSeq) lumican isoform X1
KO
K08122
lumican
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfs00535
]
130519417 (lum)
Proteoglycans [BR:
tfs00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
130519417 (lum)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_6
LRRNT
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
PBD
Motif
Other DBs
NCBI-GeneID:
130519417
NCBI-ProteinID:
XP_056878831
LinkDB
All DBs
Position
22:5476543..5480005
Genome browser
AA seq
410 aa
AA seq
DB search
MQPAKTSPLRPIAFFHHCFPIFPFLSPPPLSVFPSVFFSRDFQLLNTTLFLPTGPPAPRT
RRERSTGAMCPLRVPLLAALISLALCQYYDYDYQPASILGPSGPNCNQDCDCPISFPSAM
YCDSRKLKAVPVVPSGIKYLYLQNNQIDAIKAGVFDNVTDTLRWLILDNNQITNGKIEKG
TIDKLTALEKLHVSFNNLTEPVIPPSKSLDELKIMHNMLSKFPGGLLSDKENLTSINLQF
NQLTSDAIAGAFTGPKKLFSLDVSHNKLKKLPAGVPSTLVILYADYNDIAGVAAGYLGKL
PRLQYLRLSHNKLEDSGIPAGVFNATSLVELDLSFNKLQSIPEINEKLEHLYLQANEINK
FDLSSFCKYVTPTDFSHLKHLRLDGNNVTYNSMPPDYVTCLREASDIIFE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgctaaaacctcccccctccgtcccattgcttttttccatcactgtttcccc
atcttcccctttctctctcctccccctctctcagtctttccctctgtgtttttctccaga
gacttccagcttttgaacaccacactgttcttacctactggccctccagccccacgcaca
cgaagagagcgaagcacaggagccatgtgtcctctccgtgtacctcttttggctgcattg
atcagcctggccctgtgccagtattatgactacgactaccagcctgcttccatcttggga
ccctcagggcccaactgcaatcaagattgcgactgccccatcagcttccctagcgccatg
tattgtgacagccgcaaactgaaggctgttcccgtcgtcccatcagggatcaaatacctc
tacctccagaacaaccagatagatgcgatcaaggcgggtgtttttgacaacgtaaccgat
accctccgctggctgatacttgacaacaaccagattaccaatggcaagatcgaaaagggc
acaatcgacaaactcaccgccctggagaagctacacgtcagcttcaacaacctgacggag
ccagtcatccctccatcaaagtctcttgatgagctgaagataatgcacaatatgttgtcc
aaattccctgggggactgctgtctgacaaggagaatctgacctccatcaatctccagttc
aatcagctgacctcagatgccattgcgggggccttcacagggccgaagaaactgttttct
ctggatgtgagccacaacaagctgaagaagctgcctgctggagtccccagcacactggta
atcctctacgctgactacaatgacattgcgggtgtggcggcaggatacctgggcaaactg
cccaggcttcagtacctgaggctctcgcacaacaagcttgaggactctggaattcccgct
ggagtgttcaatgcaacatccctggtggagctggacctgtcctttaacaaactgcagtcc
atccctgagatcaatgagaagctggagcatctctacctccaggccaatgagattaacaag
ttcgacctgtcaagtttctgcaagtacgtcacacctaccgacttctcccacctgaagcac
ctgcgcctcgacggcaacaacgtgacgtacaacagcatgccccccgactacgtcacctgc
ctgcgcgaagcttcggatatcatattcgaatga
DBGET
integrated database retrieval system
