Takifugu flavidus (sansaifugu): 130519782
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Entry
130519782 CDS
T09160
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfs03016
]
130519782 (pus1)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
130519782 (pus1)
Transfer RNA biogenesis [BR:
tfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130519782 (pus1)
Prokaryotic type
130519782 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
130519782
NCBI-ProteinID:
XP_056879344
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MLKIRPVFAAFVRQSVTSERTGILSWVVDMMSGGVDQKIQQLKRVQEGDEDCVTKRRKTD
VEPSNEDRRYPKKKVALLMAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPQNHG
DDMKKMSFQRCARTDKGVSAAGQVVSLKLLLIDDLTEKINEHLPPQIRILGVKRVTQGFN
SKNNCDARTYAYMLPTVAFSPKDFDAAGTAPSFRLQPETLQRVNHLFAHYKGTHNFHNFT
SQKAPNDPSARRYITHMLCGEPFIRGDTEFAVITVRGQSFMLHQIRKMIGLVIAVIKGYA
GEEVMERSWGPQKVDVPKAPGLGLVLEKVHFDRYNKRFGGDGLHERLEWEEQEEAVQAFK
EAYIYPTIMETERQEGSMVSWMNTLPIHDFEASAGEAQDGCRLQPRPESTNGDIVNEGHI
SD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaattcgacctgtatttgctgcctttgtcagacagagcgtgacgtcggagagg
acagggatcctgtcttgggtggtcgacatgatgtctggaggtgtggatcagaagatccag
cagttgaagagggtccaggagggcgacgaagactgtgtaacaaagaggaggaagacagat
gtggagcccagtaacgaggacagacggtaccccaaaaagaaggttgccctgctcatggcc
tactctgggaagggatactatggcatgcagaggaatcccggatcttctgagttcaggact
attgaggacgacctggttgctgcacttgtcaaatctggctgcatcccccaaaaccatgga
gatgacatgaagaagatgtctttccagaggtgtgcaaggacggacaagggcgtgtctgca
gctggtcaggtggtgtcgctgaagctcctgctgattgatgacctcactgagaaaatcaat
gaacatctgcccccacagatccgaatcttgggtgtgaaacgggtaactcagggcttcaat
tccaaaaacaactgtgatgctcgtacgtatgcgtacatgcttccaactgtggccttttct
ccaaaagactttgatgccgctggaactgcccccagcttccgcctgcagccggagacgctg
cagagggtcaatcacctgtttgctcactacaaagggacccacaactttcacaacttcacc
tcacagaaggccccaaacgacccaagtgcccgtcgctacatcacgcacatgttgtgtggc
gagcctttcattcgtggtgacacggagtttgctgtgatcaccgtgcggggtcagagcttc
atgctacaccagatccgaaagatgatcggcctggtaattgccgtaataaagggttacgct
ggagaagaggtcatggagcgcagctgggggccgcagaaggtggacgtgcccaaagctccg
ggcctgggtctcgttctggagaaagtccactttgaccgctacaacaagcggtttggtgga
gacgggttgcatgaacggctggagtgggaggagcaggaggaggctgtccaggccttcaag
gaggcctacatctacccaaccatcatggagacggagcgtcaggagggttccatggtcagc
tggatgaacacacttcccatccatgactttgaagccagtgcgggtgaagcccaagacgga
tgccgtctccaaccacggcctgaatccaccaacggagacattgtcaacgaaggccacatt
tctgattag
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