Takifugu flavidus (sansaifugu): 130520550
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Entry
130520550 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130520550
04091 Lectins [BR:
tfs04091
]
130520550
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130520550
Lectins [BR:
tfs04091
]
C-Type lectins
Others
130520550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
REJ
GPS
PKD
MalQ_N
FAM217
Motif
Other DBs
NCBI-GeneID:
130520550
NCBI-ProteinID:
XP_056880218
LinkDB
All DBs
Position
2:17186847..17201631
Genome browser
AA seq
2480 aa
AA seq
DB search
MESFTLSILTCLMICFLTGACHADDDAHAFSCPEHQEGFDASCYEFVSKQQSFLNAQGWC
EQGGGHLAFILNDEIQQFLLKHLEPGLDWWLGLAPAAPNLTLDTTATDGSLAWLDGSDIS
YSNWVNPPDTEAACGHILKHSGFQWEATANCSQELNFICQFESERSLACNDHNATLQCGS
GQVIEIDDSFYGRKTIHYCRSELTTSPASSQEECSWIDVTESITARCHGQQSCQASVNLS
SLGQPCPMLGSYLSIEYHCKNGLQLLLTKLAAVFDNVTITVRWLLQPFEGNLTCTLNAGD
GHTIDPYSPVKMESTMMHKFSHPGVFTVSVECTTSDWRVTAEKTITVQEPVRQFGVIRCY
SRNMSTDGNKCNVFHDGPVHVQVQVEQGTNISYGILLDDQLLANSSVDRGTTPYNITLSV
NVMEKLGLGCHNLTLTASNKITGQPVSSGLELCVQEPVKGLQASIVTDGDDCPDSTDLVI
SVSLEKGAPVELLFSLTGATDALSEPRDMFNSSSKIYTFSSPLEGLSKVNVRAMNALSAF
DVDVDLSKILHACQNYSDHSLDESGNSTIGNMSINNVKIIAAPDTLMDNSQSVSLNVTGP
DLSPENGLTFEWKCRGNCKCGHKTKGDTHTIEKDCLPDPFDMIKYVVAVRRATWFRKPLK
LGSASKCISVVPKKFTDVTISCEDCASISVNDHVKLRLNCVSTCPDVVWSIEDLKPDGLQ
KCHLKAGRKPLVDKQEGNTEYVVRSQQLKLSKETFRNISVVVYGKTEPGFANYTLPIPDA
EPTKPSATGAPADPSPPSCSISPSSGTVLDAFDITCSVSAFCSTGCSYCFKTDTGNHLRC
SSAAEVRSVYLPLGDMNNNYSLTVVVTVKNERGTTTSTVPTQVWKSSSSVEALQTTLEDT
VSQLEQQGLLTGEALGQIFTSVSDMLNTEANQDQLDARMELREQMLTKISTVLLDSPSNT
TNQVEVTARAVAGLTQRPDELSLAAQEEAGSLLVDLSSALNTLTINQDDGGEVVHAATPI
VEAASNILNVSSSKKVSDFLLTGIDNVQSALLINKELNGEPAIIDSGQISVYVNRLSPEN
MQMQTINVQKNTSSKFSFPPLPTHIVSPEEPVDVRMMSFETNPYSWKEGNITGTVGSVSL
TRMNGTTIPVRNLPEEIEILLPRLDIGRENNTVLDLANFSTVIIEVPSPDVTLVLKLEPS
DEISFMLFLGYKDYPSDENYVAKTRIPLKNSTAEEKYTWVLSPNDRTEDVGLHYLVVKPI
VEPGTKSVNATVTVISIAAQCKYWNETQSSWSEDGCRVGPLTTPLVTQCLCNHLTVFGSS
FFVMPNLVDVSRTAELFATFTNNPVVVCFVGAIFAIYLLVVVWARRKDIQDSAKVKITLL
EDNDPLAEYRYLLVFNTGHRRGAATSSQVTITLLGSEGESEPHHLTDPEKPVFERGGVDM
FVLTTHFSLGELQSIRLWHDNSGEHPAWYVNKVIVQDLESDRKWHFLCNSWLAVDVGECS
LDKVFPVATETDLKRFSNLFFMKTAKDFQDGHIWFSVINRPPCSTFTRVQRVSCCFSLLL
CTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGVQSSIIMFPINLLIVSIFRNTRPR
EKATKADASNQGKKGRVSPSKPSSPKKESKDITPDTVMKDIKRIAQSLLKAMKSPVPDME
LRPGQQVDINTLLSLLEDIIRLQNWAAGDFYTDEIKKDHSKTLSLHSVNLQDNSLYGSPE
KTSEENPKRSGNSRYLYRQLHRVEKELGLLGPSGFPYPDRYNRAVQQVQGIKGLLEYDLP
SSSLETAKLNGSVSLEESGDSSKKCCQRGLPWWFVFVGWTLVIATSGVSGYFTMMYGLTY
GKDRSISWLISMLVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEFGEPQINESLRYAD
PDMMCAVRRDSTCSFYQPPPPTDIERMRNNMIKEQKVFALIREILAYAGFMWMLLLVAYG
QRDPNAFFLTQHIDRXFSKDISDSMSIQDVFNWANATLLSNLFGEYHGFITDGNSKLVGN
ARLRQVRVNKDSCHTASSMQQPGRDCHAQYSWDLENMGSYGPGWSSVVVDNTSQNLDSPW
VYQSQGRLRAYPIWGNMMLYRGGGFVVDLGPDSQNSSRVLRYLYDNTWMDVYTQAVFVEF
TVYNANVNLFCIVTLMFETTATGAFQFRTELQNVRLYQSTGGLHIFVMASEAIYFLFIFY
YMVVQGKLMRQQRWAYFRSKWNLLELAIIILSWSALSVFIKRTLLGKRDIEYYQSNKDQY
ASFHETAKADAVLGYLIAFLVLLATIKFWHLLRLNPKLHMITATLQRAWADISGFLVVMA
IMFLAYSIASNLMYGWKLYSYRTLLDSAQTMISLQLGIFNYEEVLDYNPVLGAFLIGSCI
VFMTFVVLNLFISVVLVAFSQEQIYHKPSEDEEIVDLMLMKLGSLFGLKCKKQGEEDQTR
NATSSNNEPSTISPGNSFSP
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctttactctctccatactgacatgtttgatgatttgcttcctcactggcgcc
tgtcatgctgacgatgatgcacatgccttctcgtgtccagagcaccaggagggttttgat
gcttcttgctatgagtttgtgtccaaacagcaatccttcctcaatgcccagggatggtgt
gagcaaggaggaggacaccttgctttcattctcaacgatgaaatacaacaattccttcta
aaacacctggagccgggtctggactggtggctcggactggcaccggcagctccaaacctc
acgcttgacaccactgccactgacggttcccttgcttggctggatggctcagatatcagt
tacagcaactgggtgaaccctccagacacagaagcagcctgtggacatatattaaaacat
tcaggttttcagtgggaagccacagcgaactgcagccaggaactcaacttcatctgccag
tttgaatcggagcgatccttggcgtgtaacgaccacaacgcaacactgcagtgtggttct
ggccaagtcatcgagatagatgacagcttctatggtcgaaagacaattcactactgtcgc
tctgaactcacaacctcacctgcatcctcccaggaggagtgcagctggatagatgtgacg
gagtccattacggcccgttgccatggacaacagtcttgccaggcttcagtcaacttgagc
tctcttggtcagccctgtcctatgttgggaagctatctgtcaatagaataccactgcaaa
aatggcctccaacttttattgacaaagttggcagccgtctttgacaatgtcaccatcacg
gtcaggtggcttcttcagccttttgagggaaaccttacgtgcacactgaatgctggggac
ggccataccatcgatccatacagtccagtaaagatggagagcactatgatgcacaaattc
agtcatcccggtgtttttacagtcagtgtggagtgcaccacaagtgactggcgtgtaaca
gcagagaaaactataaccgtccaggaacctgtcagacagttcggtgtcattaggtgctat
agcagaaacatgtcaacagatggcaataaatgcaacgtgttccatgacggacctgtgcac
gtccaggttcaggttgaacaaggaacaaatatttcttatggaattctccttgatgaccag
ttgcttgcaaactcatctgtggacagagggaccacaccctacaacatcacgctgagcgta
aatgtgatggagaagcttggactcggctgccacaatctaaccttaactgcctctaataag
atcacaggtcaaccggtgtcctcaggtctggagctgtgtgtgcaggagccggtcaaaggc
ctgcaagcctccatcgtaacagatggagatgattgtccggattcgacggatctcgttatt
agtgtttcactggagaaaggagcccccgtggagctgctgttcagtttgacaggagccacg
gacgctttgtctgaacccagggacatgtttaacagcagctcaaaaatatatacattctcc
agtccgcttgaagggttgtcgaaggtgaatgtacgagccatgaatgccttgtctgccttt
gacgtggacgtggacttgagcaagatactgcacgcttgccagaattattcagaccattca
cttgatgaatctggaaacagtacaatcggaaatatgagcatcaacaacgtgaaaatcatc
gctgctccagatactttgatggacaacagtcaaagtgtgagtctaaatgtaactggacct
gacttatcacctgaaaacggactcacttttgagtggaaatgtcgaggaaactgcaaatgc
ggacacaaaacgaagggtgacactcacactattgagaaagactgtctcccagatcccttt
gatatgatcaagtacgttgtggctgttaggagagcaacctggtttagaaagccgcttaaa
cttggctcggcttcaaagtgcatcagtgtggttccaaaaaaatttacagacgtcaccatc
agttgtgaggactgtgcttcgatcagcgtgaacgaccatgtgaagctaaggctgaactgt
gtttcaacgtgtccagatgtagtttggtctattgaagatctcaaaccggatggattacaa
aaatgccacttaaaagcaggaagaaagccacttgttgacaagcaggaaggcaacactgaa
tatgtcgtccgcagtcaacagctgaaactttcaaaagagacgttccgcaacatctctgtg
gttgtttatggaaaaacagagccaggttttgccaactacactttaccgatacctgatgcc
gagccaacaaaaccatctgcaaccggcgcgccagcagatcccagcccgccgtcatgtagc
atctctccatcctcaggaacagtcctcgacgcgttcgacatcacctgcagcgtgagcgct
ttctgctccactggctgctcgtactgtttcaaaacagacacaggtaatcatctgcgctgc
agtagtgcagctgaggtgagatctgtgtacctgcctctcggagatatgaacaacaactac
agtctgactgtcgtggtgactgtgaaaaatgaacgcgggacaaccacctcaactgtcccc
actcaggtgtggaaaagcagcagctcggtggaggctctccagactacactggaagacaca
gtgagtcagttagagcagcagggtctgctcaccggtgaggctctcggacagatcttcacc
tcggtttctgatatgctaaacactgaggcgaaccaggatcagctggacgcaaggatggag
ctcagagaacaaatgctgaccaaaattagcacagttctgctggactcacccagcaacaca
accaaccaagtggaagtaacagccagagctgttgcaggactcactcagcgcccggatgag
ctcagtctagctgcacaggaggaagctggttccctgttggtagacctcagctctgctctc
aacactctcaccattaatcaggatgatggtggagaagttgtccatgcagctacaccgata
gtcgaggcagccagtaatattttgaatgtctcctcaagcaaaaaagtctctgattttctc
ctcaccgggatagacaatgtccaaagtgccctgttgattaataaggaattgaacggagaa
ccggccatcattgattctggtcagatcagtgtttacgtaaacaggctatcacctgaaaac
atgcagatgcagactataaatgtccagaaaaacacctcctcaaagttctctttccctcca
ctgccgactcatattgtctctccagaagagccagtggatgtcagaatgatgagttttgag
acaaatccttattcttggaaagagggaaacatcacagggactgtcggatccgtctctctc
acccgaatgaatggcacaaccatcccagtccgcaacttacccgaggagattgagattctg
ctgccaaggctcgatattgggagggagaacaatactgtcctggaccttgccaatttcagc
acagtaataattgaggttccctcaccggatgtaacactggtgctgaaattggagccatct
gatgaaatttcctttatgctgttcctgggatataaagattatccatctgatgagaattat
gtggcaaagacccgtattcctctcaagaattccactgcagaggaaaagtacacttgggtc
ctgagtcccaatgacagaacagaggatgtcggactgcactaccttgttgtgaagcccatt
gtggagccaggcaccaaatccgtcaatgccaccgtcaccgtcatttccatcgcggcgcag
tgtaaatactggaacgaaacccagtcttcgtggagtgaagatggctgcagggttggacct
cttaccacacctttagtcacccagtgcctctgtaaccacctaactgtctttggcagctct
ttctttgtcatgcctaacttagtagatgtttcacgcacagcagaactttttgccacgttc
accaacaatccagttgtggtgtgttttgtgggggccatctttgccatttacctcctcgtg
gttgtgtgggcacgaaggaaagacatccaggattcagctaaggtgaagataacacttctg
gaggataacgaccctttggctgagtatcgttatttgctggtttttaacacaggccatcga
cgtggtgcagccacttcctctcaggtcacaataactcttctgggctcagaaggagaaagt
gagccgcaccacctcacagaccctgaaaagccagtgtttgagagaggtggggtggacatg
tttgtgttgaccacacacttttccctcggagagctgcagagcatcaggctatggcatgac
aactctggagaacaccctgcatggtatgtcaacaaagtaatagtgcaggatctggaaagt
gatcggaaatggcacttcctctgcaactcctggctggctgtagatgttggagagtgcagt
cttgacaaagtcttccctgttgccacagagacagatttgaaaaggttcagtaacttattc
ttcatgaagacagccaaggatttccaagatggccacatatggttttcagtcatcaaccgc
cctccttgcagcacctttactcgggtgcagcgcgtgtcttgctgtttttccctgctgctc
tgcaccatgttgaccagcatcatgttctggggcatccccactgacccctctgagcaaacc
atggaccttggtcatattgagttcacctggcagcaggtcatgatcggagttcaaagctcc
atcatcatgttccccatcaatctgctcattgtgagtatcttcagaaacactcgtccccgg
gaaaaggctaccaaagcagacgcatccaatcagggaaagaaaggtcgagtttccccgtca
aagccctcctccccaaagaaagagtcaaaagacatcacaccggacaccgtgatgaaagac
attaagagaattgcacagtcactgttaaaggcaatgaagagcccagtgcctgacatggag
ctccgacctggtcagcaggtggacatcaacactctgctgtctctgctggaggacattatc
agactgcaaaactgggcagctggagatttctacacagatgagatcaagaaggatcactcc
aagaccctcagtttgcactcagtcaatctacaagataatagcctctatggtagtcccgag
aagacctcggaagaaaatccaaagaggagcggcaacagtcgatacctttacaggcagcta
catcgtgtcgagaaggaactgggtttgctggggccttctggttttccatacccggacagg
tacaacagagccgtgcagcaagtccagggaattaaaggtctgttggaatatgatctgccc
tcatccagcctggaaacagcaaagctcaacggcagtgtcagtctagaagagagcggagac
tcatccaagaaatgctgtcaaagagggctgccctggtggtttgtgtttgttggctggaca
ttggtcatcgcgaccagcggcgtgtccgggtatttcaccatgatgtacggactgacctac
ggaaaagaccgttctatcagctggctcatctccatgctggtttccttctttgagagtctg
tttataactcaacctctgaaggttcttggttttgctgcattctttgcactcgttctgaag
aaagttgaccaggaggaatttggagaaccacagataaatgagagcctgcgatacgcagat
cctgacatgatgtgcgcagtgagaagagacagcacgtgcagcttttatcagccgccgccc
cccactgacatcgagaggatgagaaacaacatgattaaagagcagaaagtgtttgctctc
atacgggaaatcctcgcatacgcaggctttatgtggatgttgcttctggtggcatatggt
cagagggaccccaacgctttctttttgacccagcacatcgacagangcttcagcaaagac
atctcggacagcatgagcattcaggatgtgttcaactgggccaacgcaaccctgctgagc
aacctgtttggggaataccatggattcatcacggatggaaattcaaagttggtgggtaac
gcgcgccttcgacaggtgagggtgaacaaagactcctgtcacacggcttcttcaatgcag
cagcctgggagggactgtcatgctcagtactcctgggatctggagaacatgggctcttac
ggcccgggctggagctcagttgtggttgacaacacctctcagaaccttgacagcccatgg
gtgtaccagtctcagggtagactgagggcctacccaatctggggcaacatgatgctctac
agaggaggggggtttgtggtggatctggggccagattcacaaaactccagcagagttctt
cggtacctctatgacaacacgtggatggatgtgtacacccaagccgtctttgtggaattc
actgtgtacaatgccaacgtcaaccttttctgcattgtgacactcatgtttgagaccaca
gccaccggagctttccagttccgcactgagctgcagaatgtgcgtctgtaccagtcgacc
ggtggccttcacatctttgtcatggcctctgaagccatctacttcctcttcatcttctat
tacatggtggtccaggggaagctgatgaggcagcaaagatgggcttatttcagaagtaag
tggaacctgctagagctggccatcatcattctcagctggagtgcactttctgtcttcatc
aagagaactttactgggaaagcgggacattgaatactaccagagcaacaaagatcaatat
gccagtttccatgagacagccaaggcagatgcagtgctggggtatctgatagccttcctg
gtgttgttggctacaatcaagttttggcacctgctgagactgaatccaaagctgcacatg
atcacagccacactgcagcgagcctgggctgacatttcaggcttcctagtggtcatggcc
atcatgtttctggcctactccatagcttctaatctgatgtatggctggaagctgtactcc
tatcggactctgttggactccgcacagaccatgatcagcctgcagcttggcattttcaac
tacgaagaggttcttgactacaatccggtacttggtgcattcctcattggctcctgcatc
gtgtttatgacctttgtggtgctcaacctcttcatctctgttgtgctagtggcattcagt
caagagcaaatatatcacaagccgtcagaggatgaggaaattgtggacctgatgctgatg
aaacttggcagtctgtttggtctcaaatgtaagaaacaaggtgaagaagaccaaacaagg
aatgccacctcttctaataatgagccttcaactatttctcctggaaacagtttttctccc
tga
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integrated database retrieval system
