Takifugu flavidus (sansaifugu): 130521106
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Entry
130521106 CDS
T09160
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130521106 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfs04147
]
130521106 (copb1)
Membrane trafficking [BR:
tfs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130521106 (copb1)
Exosome [BR:
tfs04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130521106 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
130521106
NCBI-ProteinID:
XP_056880734
LinkDB
All DBs
Position
2:16554685..16562556
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVTSDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEPELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDSLRPLVIEKMLEVFHAIRTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKETGEVKAEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRSFLMDGDFYVAASLATTLTKVALRYVEIVPDKKRQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIIDLNDYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKANV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagagaacgtttgttacactctgatcaatgttacatctgattcagagcct
ccttccgaagtcagcctgaaaactgacttggaaaagggggaaatcaaggcaaaaaccgaa
gccctgaagaaggtcatcatcatgatcctaaatggtgaaaagttgccagggctgctgatg
accataattcgcttcgtgctgccacttcaggaccacaccatcaaaaagctgctgctggtt
ttctgggagattgtccccaaaacaactcctgatggtaaactccttcaggagatgatcctg
gtctgtgatgcctacagaaaggaccttcagcatcccaatgagttcatccgtggctccacg
ctgcgtttcctgtgcaaactgaaggagccagagttgctggagcctctcatgccagccatc
cgggcctgtctggagcaccgtcacagttacgtgcgacgaaatgccgtcttggccatttac
accatctataggaactttgaaaacctcatcccagatgctccagagctgatccatgatttt
ttggtgaatgagaaagatgccagctgcaagagaaatgcgttcatgatgctaattcatgcc
gatcaggatcgagctctggattacctcagcacgtgtatcgaccaagttcacactttcggg
gacattctccagctggtcattgtggagctgatttacaaagtttgccatgctaacccctct
gaacgggcccgctttatccgatgcatctacaacctgttgcagtcctccagcccagcggtt
aaatacgaagctgcgggcactcttgtaaccctgtccagtgctcccacagccatcaaggct
gcagcccagtgctacattgatttgatcatcaaggagagcgacaacaacgtgaagctgatc
gttctcgaccgcctgatagaactcaaggagcatcccactcatgagcgtgttctccaggac
ctggtcatggacattctgcgcgtgctcagcaccccggacctcgaagtaagaaagaagacc
ttgcagctggctttggaccttgtttcgtcccgtaacgtagaagagttggtgatcgttttg
aagaaagaggtgatcaagacgaacaacgtgagcgaacacgaagacacggataagtacagg
cagctgttggtgcgcacgctccactcctgcagcgtgcgcttccctgacatggcagccaat
gtcatacctgtactgatggaattcctaagcgacactaatgaagcggccgccgccgacgtg
ctggagtttgtgcgggaggcgattcagaggttcgatagcttgaggccgctcgtcatcgag
aagatgctggaagttttccacgccatcagaactgtcaagatttacaggggagcgttgtgg
atcctgggagaatactgcagcaccaaggaagacatccagagcgtgatgacggaagtgcgc
aggtccctgggagagattcccattgtagaaaatgaaataaagaaagagacgggggaggtg
aaagcagaggatgaagtgagtgcagctccagctcagaagctggtgacagaaatgggcact
tatgtgacacagagtgctctcagctcctccaggccctcaaagaaggaagaggacagacct
ccgctcagaagcttcctgatggatggagatttttacgtggcagcgtccttggccaccacg
ctgaccaaagtggccttgcgttacgttgagatcgtcccagataaaaagaggcaaaattcc
ttcgttgcagaggccatgctcatcatggtcactgtgctgcacctgggcaagtcctctctg
cccaagaagccaatcacagacgacgacgtggaccgcatctcgctgtgcctgaaggtcctg
tcggagtgctcgccacttatgaatgacattttcaataaggagtgccgtaaatccctgtca
cacatgctgactgtcagactggaggaggagaagctctcgcagaagaaggagtcggagaag
cggaacgtcaccgtgcagcccgacgacccgatctccttcatgcagctgacggccaagaac
gaaatgacgtccaaggaggaccagttccagctcagtctcctggctgccatgggcaacact
cagaggaaggaggctgccgacccactcgcttcaaaactcaacaaggtaacccagctgact
ggcttctcagaccctgtatatgcggaagcctacgttcacgtcaaccagtatgatattgtt
ttggatgtactggtggtcaaccaaaccagtgataccctccagaactgcacccttgagctg
gccactttaggtgatctgaagttggttgaaaagccctcccctctgactctggctccccac
gatttcgccaacatcaaggccaacgtgaaggtggcctccaccgagaacggcatcatattt
ggcaacatcgtctacgacgtctctggtgctgctagcgacagaaactgcgtggtcctcagt
gacatccacatcgacatcatggactacatccagccagcttcctgtaccgatgcagagttc
cgacagatgtgggcggagtttgagtgggaaaataaggtgacggtcaacaccaatatcatt
gacctgaacgattatcttcagcatatcctgaagtccaccaacatgaagtgtctgactcct
gaaaaggctctgtctggcttctgcggcttcatggctgccaacctttacgctcgttctatc
tttggagaagacgccctggctaacgtcagcatcgagaagcccatccacctgggccccgag
gcgcccgtcacaggacacatacgcatcagagccaaaagtcaggggatggctttgagcctc
ggcgataagatcaacctctctcagaagaaggcgaatgtctga
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