Takifugu flavidus (sansaifugu): 130521651
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Entry
130521651 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfs03009
]
130521651
03036 Chromosome and associated proteins [BR:
tfs03036
]
130521651
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130521651
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
Pre-60S particles
Helicases
130521651
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130521651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
tify
Motif
Other DBs
NCBI-GeneID:
130521651
NCBI-ProteinID:
XP_056881353
LinkDB
All DBs
Position
2:complement(19581229..19591280)
Genome browser
AA seq
740 aa
AA seq
DB search
MPSKVFFETEDQVMEEVVDIAADVKTPKNKSKDGMKLKKKQKTKEQMEQEDQDCEPPAXQ
KKKKNDKVTVDQENDHTDMDGNSSVETSPKKNNGENTEKNTQKQKKTVSAEATNGLSNGK
TPFETPSQTPSQSPSQSSEESASDSEKEMETPEQREGAFSNFRISPVTINKLKARGVSYL
FDIQVKTFDSVYDGEDVIAQARTGTGKTFSFAIPLVEKLQRDSAGPARGRAPKVLVLTPT
RELAIQVAKDFKDIIKKLSIVCFYGGTSYMPQIDAIRNGIDILVGTPGRIKDHLQNNKLD
LSKLKHVVLDEVDQMLDMGFAEQVEEILASSYKKDADTNPQTLLFSATCPPWVYDVAKKY
MRPKCKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIVFCETKK
EANELSMNASIKQSTQSLHGDIPQKQRETTLKGFRNGSFEVLVATNVAARGLDIPEVDLV
VQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVPTAN
DIIKSSSKDAVRFLDSIPVAAIGYFRASAEKLIEERGAVDALAAALAHISGATALEQRSL
LNSDAGYTTLQLTCSLEMHNIGYAWKSLKEQLGEEIETHIHRMTFLKGRMGVCFDVPADK
VKEIQENWKDGRRWQLTVATELPELEVKEFTNGFGRGGGGRGGRGGRGGFRGGRGRSFGG
FRNGNNRGGQRRSFSQAFDY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaagtattctttgaaacagaagatcaagtcatggaagaagttgtggacata
gccgcggacgtcaaaactccgaagaacaagagcaaagatggcatgaagctgaagaagaaa
cagaagaccaaggaacaaatggagcaggaggaccaagactgtgaaccaccagcangccaa
aaaaagaaaaaaaacgacaaggtgacagtggaccaagagaatgaccacacagacatggat
gggaacagtagtgttgaaacatcaccaaagaagaacaatggagaaaacacagagaagaat
acacaaaagcaaaagaaaacagtatcggcagaagcaacgaatgggctttctaatggaaag
accccctttgagacgccatcccagacaccatcccagtcaccatcccagtcgagtgaagaa
tcagccagtgacagtgagaaggaaatggagacaccagagcagagagaaggagccttttcc
aactttagaatctccccagttacaatcaacaaactcaaagctcggggagtctcctacctg
tttgacattcaggtaaagacatttgactccgtgtatgatggcgaggatgtaattgcccag
gcccgaacaggaacagggaagacattctcctttgccattcctttagtggagaaactccag
agagattcagcagggcccgcccgaggccgggccccaaaggtcctggtcttaactccaact
agagagctggccatccaggtcgccaaagacttcaaagacatcatcaagaaattgagtata
gtttgcttctatggcggcacctcgtacatgccccagattgatgcaatccgcaatggaatt
gacatcttggtcggaactcctgggcgcatcaaagaccaccttcaaaataataaattggac
ctctctaaactgaaacatgtggttctggatgaagtagatcaaatgttggacatgggattt
gcagaacaggtggaagagattttggcttcatcctataagaaagatgctgataccaatcca
cagacgctgctgttttcagccacatgtccaccctgggtttatgatgtggccaagaaatac
atgaggccaaagtgtaagcatgttgatttgattggcaagaaaacacagaaagctgcaaca
actgtcgagcacctggccatagcgtgccactggtcccagcgtgccgctgtgataggtgac
gtgatccaggtgtacagcggcagccacggcagaaccattgtcttctgtgaaacaaagaag
gaagccaatgaactctccatgaatgcatcaattaaacagagtacccagtccctccatgga
gacatccctcagaaacagagagagaccacactgaaaggcttcaggaatggctcttttgag
gttctggtggccaccaatgtggcagctcgtggtttggacatcccagaagttgatctggtg
gtccagtgttctccaccaaaggatgtggagtcttacatccatcgctcaggtcgtacaggc
cgagcaggtaggactggagtctgcatctgtttctaccagaggaaagaggaggaccagctc
cgctatgtggaaaacaaagctggcatcactttcagacgtgttggtgttcccactgccaat
gacatcatcaagtcatcaagcaaagatgccgtcaggtttctggactctattccggttgca
gctattggttactttcgagcatcagctgagaagctgattgaagaaaggggagcagtcgac
gctctcgctgctgctctggctcatatctctggagcgacagccctcgagcagagatcgctg
ctcaactctgatgcaggttacaccactctgcagttgacgtgttctctggagatgcataat
atagggtacgcatggaaaagcctgaaagagcagcttggagaggagatagaaacccacatt
cacaggatgacgttccttaaaggcagaatgggagtttgttttgatgttcctgccgacaaa
gtcaaggaaattcaggagaattggaaggatggccgccggtggcaactgactgttgccaca
gagctccctgaactggaggtaaaagagttcactaatggttttggaagaggtggaggagga
agaggaggacgaggaggacgtggcggtttcagaggcggaagaggacgaagttttgggggc
ttcaggaatggaaacaacagaggggggcagagacgcagtttcagtcaggcatttgattat
taa
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