Takifugu flavidus (sansaifugu): 130521771
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Entry
130521771 CDS
T09160
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130521771 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
tfs04515
]
Cadherins
Cadherin related
130521771 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
CADH_Y-type_LIR
Cadherin_pro
EGF
hEGF
Laminin_G_3
Y_Y_Y
RRM_3
Motif
Other DBs
NCBI-GeneID:
130521771
NCBI-ProteinID:
XP_056881545
LinkDB
All DBs
Position
2:complement(1729557..1897676)
Genome browser
AA seq
2948 aa
AA seq
DB search
MIWLTFFTFLAPCALGNKTVEQVPFFHGHVFENSSPGSRVNGLSVPMKRLNSQTLCDIGD
SDTATAQFRLMGDGSENFRVFSHHKRGHVLLKTCGVLDREERAEYTLGLGLCCGQCSGRE
DGMSPIVGEVASIKVDVLDTNDHQPVFPVEAVKLNLGDATALRTSIYAATARDGDSGKNA
ELIYFTVPRNGSFYAVPKTGDILLVDSILGQEEPIKFKLFARDRGWPPRTSKCVSIEINP
RQWPVTLPPNPEQAKWNPKSNPKRPERKSRSVMQTDNPIFISVSEDAGIGSVVMNLNPVR
FQSAAFELVEPDAESSPVSVSRDSGDIIISRKLDRETEPLVEMTVKIQDKRGPEWYLVRV
EMTVMDVNDNVPEWVMVPSPYLAVVSPDAPAGSLVYKLHARDGDEGNNGEVEYFLSDGGE
GRFEVDRKNGQVRTTGLPLQQDREYLLTVVAADQLGSRSVPAVLSVVAGSRPPQFSNASF
TIALAENTPAGQPFLVTPVVSFQNKPISYSLLINPSSLFSISAETGEISLTRPIDYESDQ
HRYLLLVRASEGLESMSSAAEVRVVIVDENDCVPEFFQSIYSKDGVPETVTTATSLLQVS
ASDCDSGENADLTYYTLSPDFIISPHGTIFPAGPLDYERMNHLYEFVVMAVDKGEVPRTG
TTTVRIRMANVNDEAPDFSQHVYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITSGNEE
GNFVIDSQKGLIRLRSSPPPHLQGVEYVLNITAVDDNASGGPQALSSTAQVIVGVDDVNN
NKPVFEKCQQYRESTSVLENQPAGTFVLQVHAVDADEGSNGRVTYGFMHKDSTVPAFSIH
PDTGTIVTARKFDRERQREYAVTLTATDQAADPLIGICQLTIHILDQNDNNPKFENIRYE
YFLREDTMIGTSFLRVAAHDDDFGTNAAITYSMSGEQPEYLRVNPLTGWVYVNQPISQRT
YITREIVATDGGNRSSSVELSVTITNVKNQPPQWDKESYTVVIPENTVRDTPVVTIKATS
PLGDPRVTYNLADGMVPETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFMLRVRAQN
VAAVPLAAFTTVYVNVTDVNDNVPFFTSSIYEASVTERAEAGTLVFQVSANDLDLGLNGK
ISYSLLEDRSGDHQFFRIDPELGFIYTQTVFDRETKSSYLLEVQSVDGQESARPGKHGQP
NSDTAYVRVFISDVNDNKPAFAQASYEVDVDEDADVGFAILTVSANDGDEGGNAKLRYQI
TSGNTGGVFDVEPEVGTIFVAQPLDYEQNKRYKLHVLASDGKWEDYGTVAVNVVNKNDEA
PVFTVNEYYGSVTEELDGPPVFVLQVSASDPDKDADQEALRYSLHGQGAETEFIIDEVTG
KIYAQRTLDREERAVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPVFTCAPSCHGSV
AENSIVGTSVMEMTATDLDDSAVGQNAVLSYRIMGSLDSANIHMGAVPTFSEMFTINPST
GTISVAMDGLDREQVESYLLIVEARDGGGMTGTATATIQIKDVNDHAPRFTDRACVVRIS
ENAETNAEVLELAAEDRDTGENAQLTFSVVAGDQEQKFYIVSHKQEQRGTLRLKKRLDYE
RHSEQMFNLTLKVEDLDFSSLLHCVVEVEDYNDHAPVFIPHFLSVAPLPEDASVGTSVAR
LVASDSDSGQNRDMTYSLSEDSDPDGLFTIDQSGVLFVARPLDREHVSQHQLVVIATDHG
VPELTGSATVQLPLLDVNDNGPEFEAAYAPIVFENAAGPQVVKLNQTSTLLRALDRDSPE
NGPPFHFSLPPEYRHSNDFYLQDNLNGTATLTALRTFDRERQKEFFIPVIMSDSGRPAKT
VTSTLTVTIGDQNDHAHVAGEKKIYINSHRGRLPTTVLGKVYSPDPDDWDNKTFVFEGHV
PSYFVLNKRTGFLIIKENAPPGTYQFQVRVSDDVWPDAVSSVSVHVRELRDDAIYNSGSL
RLADITAKEFIELRGRQQSRFDLLLDFLSEMLSVPPDDVNIFSLIDVKERMLDVRFAVHV
GPSFLQPEKMHGYLAAHKQKLQSFLQIVVFQIRVDECPSSGCAGASGCTNVLNVRDAPMV
VDCGTMSLVSVTLESTAVCSCPGRDQTHQPCGAYPRNPCFNGGVCVDTQHGYRCQCPAQF
EGPECQQNKHSFHGNGYAWFPPIMPCFESHVSLEFITDVADGLLLYSGPLAQLQTWDHED
FMAIELIDGTPTLKINHGSGTVVLQLPGNINVADRRWHRLDVRSNSKEVHFTLDRCSGAA
VMEMEGLGSWLTTQDQSSCEVMGVTPYTDRHLNMSHVLQLGGVNEDIPYVYPQLQHKHFT
GCIRNLIVDSKLYDLGNPAESQSSSPGCLTTDSSCVNMGFPSCGRRGRCHGEWGSFSCQC
VTGYTGQQCDEEVPEYSFDGHGHVHYQLPSPLPARRTWFQVLVRTRKHSSTILNLVSKEQ
TEYIRVEILQGLLSVSYNIGDGDHNLTLPKYRLDNGEWHEVFFDRHDNEMMLKLDGGGGQ
REVTGSQGRSREIVIDPTVVMLGNTFPSGINKSFQGCMRDVRINGRYLPLDPQARDGVSQ
VSVQGLLVGCSSDSCKRNQCSPPFICVDLWRVHECRCPPGHMIRVNGTKKSCVYTLCATR
PCHRGTCVAQSPSKFTCHCPEGYRGRHCETTLAVYQEDVGLSFSSLFAICICFMALLVLL
LGIFLYTRWRSYKGMKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKS
LQPSPAQSVQYCRSRALHHPPPHHHLLHQTPPPPPPSLHPLEPLSRTTSSTTLPPSVAST
SSTATTTTSLRRDVPPSRLPAQGQARPPPQLSRRSISFSSQDLARYLCEIIRDADQHPDT
GPFDSLQVFSTEGGGSSAGSLSSFSSAGLDGGSSGDGGETTREETLGDWGPRFEKLRALY
EQAETSDF
NT seq
8847 nt
NT seq
+upstream
nt +downstream
nt
atgatttggctcacgtttttcacttttctggctccgtgcgctctcggaaacaagaccgtg
gaacaggtgccgttcttccacggacacgtatttgagaactcgtcgccgggctctcgggtc
aacggactgagcgtcccgatgaagcggttaaactcacagacgctgtgcgatatcggagat
tccgacacggccacggcgcagtttcgactcatgggagacgggagcgagaatttccgcgtc
ttttctcaccacaaacgaggtcacgtcttactgaagacatgcggggttttggatcgcgaa
gaacgggctgaatacacgctgggtctcggtttgtgctgcggccagtgttcgggacgggag
gatggaatgtccccaatagtcggggaggttgcgtcgatcaaggtggacgttctggacacc
aacgatcaccaacccgtgttccccgttgaagctgtgaaactgaatctgggtgatgctact
gcgctccgcacatccatctacgcggccaccgcgcgggacggagacagcgggaagaacgcg
gagctcatttacttcaccgtgcctcgaaatgggagtttctacgcggtgcccaaaacagga
gacatcctgttggtcgattcaatcctcggtcaggaggaacccataaagttcaaactattt
gctcgtgaccgcgggtggcctccgcgcacaagcaagtgcgtgtcaatcgagatcaatcca
cggcagtggcccgtgacgctccccccgaaccccgagcaggcgaagtggaaccctaaatca
aaccccaaaaggccagagcggaagtccagatcagtgatgcaaacagacaaccccatattc
atcagtgtgtctgaggacgcagggatcgggtcggtggtgatgaacctgaacccggtgagg
tttcagtcggcagccttcgagctggtggagcccgatgcggagagctcaccggtcagcgtg
agccgggatagcggggatataatcatatcacggaaacttgaccgagagaccgagccgctg
gtggagatgaccgtcaaaattcaagacaaaagaggtccagaatggtacctggtcagggtg
gagatgactgtgatggacgtcaatgacaacgtccccgaatgggtcatggttccgtccccg
tacctggccgtggtttcccccgacgcccctgcaggctccctggtctataagctccacgcc
agagatggcgacgaaggcaacaacggcgaagtggagtacttcctgtcagacggtggcgag
ggccgttttgaggtagacaggaagaacggtcaagtgcggacgacgggccttcccctgcag
caggacagggaatatctgctgacggtcgtggctgcggaccaactgggcagccgcagcgtt
cccgccgtgctctctgtggtggctggatctcgacctccacaattcagcaacgcctccttc
accatcgctctggccgagaacacccccgccggacagccattcctggtcacacctgtcgtg
tccttccagaacaaaccaatcagctacagtctcctcatcaatcccagcagcctcttctcc
atctcggcagagacgggagaaatcagcctgacgcgtcccatcgactacgagagcgaccag
caccgttacttgctgttggtgcgagccagtgagggtttggaaagcatgagcagcgcagca
gaggttcgggtcgtcattgttgacgaaaatgactgcgtaccggaattcttccagtccatt
tacagcaaggacggcgttccggagactgtaacaacagcgacgtccctgctccaagtgtcg
gccagcgactgtgactctggggagaacgccgatctgacctattacacgctcagtccggac
ttcatcatttccccccacgggaccattttcccggccgggcctctggactacgagaggatg
aaccacctgtacgagtttgtggtgatggcggttgacaaaggcgaggtcccccgaaccgga
accaccacggtgcggatccgaatggccaacgtcaacgacgaggcgcccgacttctcccag
cacgtatatcgaaccttcgtctccgaggatgcgggtcccaacactttggtggcaacagtt
ctggccaaggacccggatggagatggcatcacctacaagatcacctcgggaaacgaggaa
ggaaactttgtcatcgacagccaaaaaggcttgatccggctgcgctccagtccgccacct
cacctccagggtgttgaatacgtactcaacatcacggcagtagatgacaatgcctccggt
ggacctcaggccctgtcctccacagcgcaggtcatagtgggagtggacgatgtcaacaat
aacaagcctgtctttgagaagtgtcagcagtaccgagagagcacgtcggtcctggagaac
cagccagcaggaacgtttgtgctgcaggtccacgccgtcgatgctgacgagggctccaat
ggaagggtcacctatggcttcatgcacaaggactccaccgtgcctgcgttcagcatccac
ccagacaccggaacaattgtgacagccaggaaatttgacagagaacgccagcgggagtac
gcggtgacgctaacggccacagaccaggcagcagacccgctcatcggcatctgtcagctc
accattcacattctggaccagaatgacaacaatcccaaattcgagaacatccgatatgag
tactttcttcgcgaggacacaatgattgggaccagtttcttgcgggtggcagctcatgac
gatgactttggcaccaacgcggccatcacgtactcgatgtccggcgaacagcccgagtat
cttcgggtcaacccgttgacaggctgggtgtacgtcaaccagcccatttctcagaggacc
tacatcaccagagaaattgtggccacagacggcggcaacaggagcagctcagtggaactt
tctgtcaccatcaccaacgtgaagaaccagcctccgcagtgggacaaggagagctacacc
gtggtcattccggaaaacaccgtccgagacactcctgttgtgaccatcaaagcgacctct
cctcttggggacccaagagtaacctacaacctggccgatggaatggtccctgagactaac
atgccagtccgcttctacctgacccccaaccgtgaggacggctcagcctccatcctggta
gcagagcccctggactacgagaccaccaggaacttcatgctgagggtccgagctcagaat
gtggctgcggtgccgttggcagccttcaccacggtgtacgtcaacgtcacagacgtcaac
gacaacgttccatttttcacctcttccatctacgaggcctccgtcaccgagagagccgaa
gcgggaacgctggtgttccaggtttcagccaatgacctggacttgggtctcaacggcaag
atctcctactcgttgctggaggatcgcagcggggaccaccagttcttccgtattgatcca
gagctgggattcatctacacgcagacagtgtttgatcgtgagaccaaaagctcgtacctg
ctggaggttcagtcagtggacggtcaggagtctgcacggcccggcaaacatggacaaccc
aactctgacacggcgtatgtccgcgtttttatcagcgacgtgaacgataacaagccggca
ttcgcacaggcgtcttatgaggtggacgtggacgaggacgccgatgtcggatttgccatc
ctcaccgtcagcgccaacgacggggatgaaggtgggaatgcgaagctgcgctaccagatc
acatctgggaacacaggaggggtctttgatgtagaaccagaggtcggcaccatatttgtc
gcccagcctctggattatgaacaaaacaaaaggtacaagctccatgtcctggcttctgac
gggaagtgggaagattacggaacagtcgctgtaaacgtcgtgaacaagaatgacgaggcg
cccgtgttcactgtgaatgagtattacggcagtgtgacagaggagctggatggacccccg
gtctttgtgttacaggtttccgcatccgacccagataaggacgctgaccaggaggccctc
cgctactcccttcacggccaaggtgccgagacagaatttattattgatgaggtcactggc
aagatctacgcccagcggacgttagaccgagaggagcgcgctgtttggcgcttcgtggtc
ttggccacggacgagggcggcgaaggcctgacaggcttcaccgacgtcattattaatgtg
tgggacatcaatgacaacgcaccggttttcacctgtgcacccagctgccatggaagtgta
gcagagaattccatagtgggaacatctgtgatggagatgacggccaccgacctggacgac
tcggcagtcggccagaatgccgtgctctcctacaggataatgggcagcctcgatagcgcg
aacatccacatgggagcagtgcctaccttctcagaaatgttcactattaatcctagcaca
ggaaccatcagtgtggccatggatggtctggacagagaacaggttgagtcctatctcttg
attgtggaggccagagacggcggagggatgacaggaacggcgacggctaccattcagatc
aaggatgtgaatgaccatgcaccaagattcacggaccgcgcctgtgtggtgaggatctct
gagaatgcagagaccaacgcagaggtcctggaacttgcggcagaggatagagatactgga
gaaaatgcccaactgaccttcagtgttgtagctggagatcaagagcagaagttctacatt
gtcagtcacaaacaggagcagcgaggcactctgaggcttaagaaaaggctggactatgag
cggcacagcgagcagatgttcaacttgacgctgaaggttgaggacctggacttctccagc
ctcctgcactgtgtggtggaggtagaggactacaacgaccacgctcccgtcttcattcca
catttcctctctgtggccccgctgccggaggacgctagcgtgggcaccagcgtggcgcgc
ttggtggccagtgactccgattcgggccagaaccgtgacatgacctacagtctctctgag
gactctgacccggatggcctgttcactattgaccagtctggtgtactgtttgtggccagg
cccctcgatcgagagcatgtatctcagcatcagttggttgtcatagcgactgatcacggt
gttcccgagctaacgggaagcgccacagtccagctgcccctgttggatgtaaatgataac
ggaccggagtttgaggcagcatacgctcccattgtctttgaaaacgccgcaggacctcag
gtagtaaaattgaaccaaacctccacgctgctccgagccctggaccgggactctcctgag
aatggcccacccttccacttcagcctcccccccgagtaccgacacagcaatgacttctac
ctccaggacaacctcaacggcacagcaacgctaacagctttacggacatttgaccgggag
cgccagaaagagttcttcatccccgttattatgagtgacagtggacgtccagccaagacg
gtgaccagcacgctgacggtaacaatcggggaccaaaacgaccacgcacatgttgccggg
gaaaagaaaatatacattaatagtcaccgaggccgattgccgacgacagtccttggaaag
gtctactcgcccgaccctgatgactgggacaataagacatttgtctttgaaggacatgtt
ccaagttatttcgtcttgaacaagcgaactggtttcctcatcatcaaggagaacgctccg
ccgggcacataccagttccaggtgcgcgtgtctgatgacgtgtggccggacgccgtctct
tccgtcagcgtgcacgtgagggagctgagagatgacgccatctacaactccggctctctc
cggctggcagacatcacagcaaaggagttcattgaacttcgagggaggcagcaaagccgc
ttcgacctgctcttggacttcctctccgagatgctttctgttccacctgatgatgtcaac
atctttagcctaatagatgtgaaggagcggatgctggatgttcgctttgctgtgcacgtt
ggcccctcgtttctccagccggagaagatgcacggctatctggctgcacacaagcaaaag
ctccagtctttcctgcagatcgtcgtcttccagatccgcgtggacgagtgccccagttcc
ggctgtgccggggccagcggttgcaccaatgttctgaacgtgcgggacgcgcccatggtg
gtggactgtgggaccatgagtctagtgtctgtgactctggagtccacagccgtgtgctcc
tgccctggacgggaccagacccaccagccctgcggcgcctatcccagaaacccctgcttc
aatggcggcgtttgtgtggacactcagcacggctacaggtgccagtgcccagctcagttt
gagggccccgagtgccagcagaacaagcacagtttccatggcaatggctatgcttggttt
cctcctataatgccgtgttttgagagccatgtttccctggagttcatcactgacgtggct
gatggactcctgttgtacagcggcccgttagctcagcttcagacctgggaccacgaggac
ttcatggccatagagctaatagatggaacccccaccttaaaaatcaaccatggctcgggc
acagtggtgctacagttgccaggcaacatcaacgtggccgacaggaggtggcatcgcctg
gatgtccgtagcaacagcaaggaggtgcacttcaccctggaccgctgctcaggggccgca
gtgatggaaatggagggtctgggaagctggttgaccactcaggaccaatcgtcctgtgaa
gtcatgggggtcaccccctacactgacagacacctgaacatgagccacgtgctccagctg
gggggagtgaacgaggacatcccatacgtctaccctcaacttcagcacaaacacttcact
ggctgcattcgcaatcttattgtggacagcaagctgtatgatctggggaacccagctgaa
tcccagtccagctctccaggctgcctgaccaccgacagcagctgtgtcaacatgggcttc
ccgtcctgcggccgccgcggtcgttgtcatggcgagtggggctccttcagctgccagtgt
gtgacgggatacacgggacagcagtgtgacgaggaagtccccgagtattccttcgacggt
cacggccatgtacattaccagctgccgtccccgctgccggcgcggagaacatggtttcag
gtcctggtccgaacccgcaaacacagcagcaccatcctgaacctggtctccaaggagcag
acagaatacatacgtgtggagattctgcagggtcttctcagcgtctcctacaacatcggc
gatggggaccacaatctaaccctgcccaaatatcgcctcgacaacggagaatggcacgag
gtcttctttgatcgccatgacaacgaaatgatgctgaaactggatggtggcggaggccaa
cgcgaggtgacaggatcgcagggccggagcagagaaattgtcatcgaccccacggtggtg
atgctgggaaacaccttcccatctggaatcaacaagagcttccagggctgcatgagggac
gtgcgcatcaacggacggtatttgcccctggaccctcaagcgcgagatggggtttcccag
gtcagcgtgcagggcctccttgttggatgttcatctgactcctgcaaaaggaaccagtgt
agcccccccttcatttgcgttgacctatggagagtgcacgaatgcagatgccctcctggt
cacatgatccgggtgaatggaaccaaaaagtcctgcgtttacaccctgtgtgcaacccgg
ccgtgtcaccgaggaacatgtgtggcccagtcgccgtcgaaattcacctgccactgcccc
gaaggttaccgaggacgccactgtgaaacaacgctggccgtctaccaggaggacgtgggc
ctgagcttcagctctctcttcgccatctgcatctgcttcatggctttgctagtgctgttg
ctgggcattttcctctacactcgctggagaagctacaaagggatgaaggaaggcgtgtac
catgtctccgcccaccacgacggctgggaagacatccgagagaacgtcctcaactacgac
gaagaaggaggcggtgaggaggaccagaatgcctacgacatggcagagttgcagaagtct
ctccagcccagcccggcgcagtcagtgcagtactgtcgatccagagccctgcaccaccct
ccgcctcaccaccaccttctacaccagacgcccccccctcccccaccgtccctccaccct
ctggaacccctcagccgtacaaccagctccaccactctgcctccctccgtagcctccacc
tcctccactgccaccaccaccacaagcctccgcagggacgtccccccatccagacttcct
gcgcagggccaagcacgaccccccccccagctgtcccgccgctccatttccttctccagc
caggacttggcccgctacctgtgtgagatcatacgggatgcagaccagcatccggacact
gggcccttcgactccctgcaggttttctccaccgagggagggggctcgtctgccggctcc
ctcagctccttcagctcagctggactggacgggggaagcagcggagacgggggagaaacc
acaagggaggagacactcggggactgggggccacgttttgagaagctgagggctttgtat
gaacaggccgagactagcgatttctaa
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integrated database retrieval system