Takifugu flavidus (sansaifugu): 130521909
Help
Entry
130521909 CDS
T09160
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130521909 (chd9)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130521909 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
130521909
NCBI-ProteinID:
XP_056881754
LinkDB
All DBs
Position
2:complement(7147323..7199585)
Genome browser
AA seq
2986 aa
AA seq
DB search
MDFFNDPSLFVGGLEGLDEDDGFPAAPSLVDELNLSADFEPLQMEPPGQEKNQDMIPHVS
TQQSLPSYNDQMGHYIGIKAQNPVGQPFTGAGAAGVGNGRMIGNQHGQYHSDMRQMPESN
GMFCNRGSPMWGNQNQNGNMYHNLPQPPQHQQHLHNHQLHMRQQAQQQHHQPCYQQPEQQ
QRIRQQQGHHQQLLTQHQQLNTHTIPLQQHHNFSFHQGSHSQSHQQLYHTQPQVQQHLNR
PRFHPRPLPNKAYLDAQGAALSSTCLQAQQQQCNYQLTGAGQTFPGPGREDPNVLFPMQS
SSLVHSLPTRSVGSAAAYQPAQFPSYPAEPDLPGLSQQILPSVSRPTANSAALTCTMPGL
SGPGSQFPSTDVMSQQHIRGPVSQPEECPFQGLRCSGETQRNLKSSDMFGKSMNCYSSMA
SPLSSEQPQSCGAIGVNGYQALGDGLLSSGAHAGDLDDLEPPDLLPDLLPQLEAALSQQD
ETKCSWTTSSQERGHEHRKPPPDEYNKEPRKNANGPSGQVRVLSPPMKSSSSSSSSSSSS
SSSSSSSSSSEKKTPRRTHHQMEPDLQDKQEKANRIISEAIAKARQRGEKNIPRVMSPES
FPSSSSQFRAHRDREHKGNGKARLKEKACRKACIVPSSKPKQKAKIGKIVIKIGKKKKRK
PESSEEESDDDPPPRHSSKDVDSKRRSNRQVKRKKYAEELEARLSDDEVKVIVKAKKTNA
ASKGSGHQLFVENPTEEDAAVVDKIMSSRIVKKEVSPGVLIEIEEFFVKYKNYSYLHCEW
ATEQQLEKDKRIQQKIKRFKMKQAQRALLFADMEEEPFNPDYVEVDRVLEVSYCEDKDTG
EEVVYYLVKWCSLPYEDSTWELKDDVDLNKIEEFEQLQAVKPDSRRMERPATNLWKKMEH
SREYRNGNTLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRMGIKGP
FLIIAPLSTIANWEREFRTWTYLNAIVYHGSMVSRQMLQQYEMYFRDSQGRVLRSAYRFQ
AVITTFEMILGGCPELNAIEWRCVVIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQ
NTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKKL
APKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLI
KGAEEKILEDFREVYNPAAVDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRC
LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAV
LQSMSGRDNSLGGGPGGGAAQQQLSKREIEDLLKRGAYGAIMDEEDEGAKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMEMVNGRNSL
VIDTPRVRKQTRPFSATKDELAELSEGESDGDETKPKFRRNNERLNSYGRTECFRVEKNL
LVYGWGRWKDILAHGRFKKQLTEWDVESICRALLSYCLVHYRGDDKIKSFMWDLIAPTED
GRTKELQNHLGLSAPVPRGRKGKKVKTQSSSFDIHKAEWLRKHNPEHILQDDGYKKHLKH
HCNKVLLRVRMLYYLKQEVIGSLAQNVLDGADSSEIKIWVPDLDNSELPALWWDAVSDKC
LLLGVFKHGYEKYNTIRADPALCFVERVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPA
LLKDDIEDDASSPGDLVVADNAGEPVPQTEGQTIYWPSPSVLTARLRRLITASQRFTKSR
QILQIHQTQSQSQPTMMLSGPLYPLPSAFNDTFNPKMAAKIERQQRWTRREEADFYRVVS
TFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFAAMCRRVCRLPPKEGDSVVDP
SLNIQPITEERASRTLYRVELLRQVREQVLRHPLLYDRLSLCQMSSDLPVWWEAGTHDRD
LLIGAAKHGVSRTDYHILRDPELSFMVAQRKYSQTKAPQQQQSCTPTSLLHPQSQVSSFM
LTGSPLPPPAQRDADPCSIVPKVEPASEGEEGREKQGERWSPPPPATPTGLEEKPVPEVK
DGEQQMVAARTKPLTPNSSERKPKKPSKRGRREARRGSESDGSSSSSSSRSSSSSSSSSS
SSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEERKKKVPAATSVKGFDEDSVA
SLSTTQDETQVAENGIANSSSHPLQEGGYMLAASYWPKDRVIINRLDSICQAVLKGKWPE
TRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGSKVTKHVAENKEFSVKLNEQEGGL
KLTFQKQGLPLKRPLESEEGPQAQQQYLARLHELQNASDTGLADITKPQCSFQTVPADFA
GQMRLNGVLDSQPVVKKRRGRRKNVEGMDLLFMNKSRVPAVPEQMPQGWGGIGQVGMGAT
PALQYCQSSTQGTPDTESRVPVINLKDGTRLAGDDAPKRKDLEQWLNEHPGFVADTGAFI
PGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKVGGAFAPPL
KNLCRFLQENPEYGVPPEWADVVKKSGYLPESMFDRILTGPIVPEEVSRRGRRPKNPLAK
AAAAATNPSASALGLNPMLTNGLLSGLDLSSLQAFQQNLQSLQSLQLTTGLMGLPSDASN
MAASNLAAMFPMMLSGVPGLPNLLGMNNLVGKSPQDGTEGSEEKAKGTSCGRAAEPSDSK
AAPHTSDTKGERTEITTPSSTSSSSSSSATPSSASAASAASSHQLSLNPLLLSSMLYPGM
LLTPGLNLPVSATQSQNSNTDTTFSTPPPPPPAVSQSNTQKTEQPAVKEEEEDELEGTLD
EEDEESAEQKENSGPEGSGKAESSSSSSDSGSSSSSSDDSDSSEED
NT seq
8961 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccagcctctttgtagggggtttggaaggtctggatgaagat
gatggcttcccagcagcaccatcccttgtggatgagcttaacctcagtgctgactttgag
ccgctccaaatggagcctccaggtcaagagaagaaccaggacatgataccacatgtttct
actcagcaatcccttccttcgtacaatgatcaaatgggtcattatatcggcattaaggca
caaaatcctgtcgggcagccgtttactggtgccggggctgcaggtgttggaaatggccgt
atgattggaaaccaacacggtcagtaccacagtgacatgcgccagatgcctgaatccaat
gggatgttctgtaacagaggcagtccaatgtggggtaaccagaaccaaaatgggaatatg
taccacaacctaccgcagcctcctcaacatcagcagcacctccacaaccatcagctccac
atgagacaacaagcacagcagcaacaccatcagccgtgttatcagcagccggagcagcag
caaagaatacgtcaacagcaaggacatcaccagcagctgttaactcagcaccaacaattg
aacacgcacactattcccctgcaacaacatcacaatttctcctttcaccaaggaagccat
tctcagagtcatcagcagctttaccacactcagccacaggttcagcagcatctaaatagg
ccgaggtttcatccaaggcctctgccaaacaaagcttatttagatgctcaaggtgctgct
cttagtagcacttgcttacaggcgcagcagcagcagtgtaactaccagctgacgggggca
ggtcaaacgttccctggaccaggacgcgaagatcctaatgtcctttttcccatgcagtca
tcatccctggttcactccctgccaacacgctcagttggttctgcggctgcttaccaaccg
gcacagttcccctcctaccctgcagagccagatttacccggtctcagccagcagattttg
ccatctgtgtcaaggcccaccgctaatagtgcagcccttacttgtacaatgccgggactc
tcagggccaggatctcagtttccatccactgacgttatgagtcagcagcacattaggggc
cctgttagtcagccagaggaatgcccttttcagggcctacgttgttctggagaaacccaa
agaaatttgaagtcatctgatatgtttggcaaatctatgaactgttattccagcatggcc
agcccactgtcctctgagcagcctcagagctgtggggctatcggtgtgaatggataccaa
gcgttgggagacggcctcctttcatcgggggcccatgctggagacttggacgacctggag
cctcctgacctgctacccgacttacttccccagctggaggcggctctcagccaacaggat
gaaaccaaatgttcatggacaacttccagccaggaaaggggacacgagcacaggaaacct
ccacctgatgagtataataaagagccccgaaagaatgcgaatggtcccagtggccaggta
cgggtcctcagtcccccaatgaagagcagctcatcatcatcttcgtcatcctcctcttcg
tcatcttcatcatcttccagctcctcctcggagaaaaagacaccacgaaggacacatcat
cagatggagccagatttgcaggacaagcaggagaaggcaaacaggataatatcagaggct
attgcaaaggctcggcagcgtggagagaagaacattcccagagttatgagtccggagagc
ttcccaagctcttcttcacagtttagggcacatcgtgaccgcgagcacaaaggaaacgga
aaagcacgactcaaagagaaggcctgcaggaaagcctgtattgtaccttcctccaagcca
aagcagaaggccaagatcggaaaaattgtcatcaagattggaaagaagaaaaaacgaaag
ccagagtcttcagaggaggaatctgatgatgatccaccccctcgacattcttccaaagat
gtcgattctaaaagacgatcaaatcgccaggtgaagagaaagaaatatgctgaagaattg
gaggccaggttgtcagatgatgaagtcaaggttattgtcaaagctaagaaaaccaacgca
gcatccaaggggtcaggtcatcaactgtttgttgaaaacccgactgaagaagatgctgct
gttgtcgacaaaatcatgtcatctcgtatcgtcaagaaggaggtgtctccaggagtgctg
attgaaatcgaggagttctttgtaaagtacaaaaactactcatacctccactgtgagtgg
gccacggagcaacagctggagaaggacaagagaattcagcagaagatcaaacgtttcaag
atgaaacaagcacagagggctctcctctttgcagatatggaagaagagccctttaaccct
gactatgtagaggtagacagagtgctggaggtgtcatattgcgaggacaaagacacagga
gaggaggtggtctattacctggtgaagtggtgttccttgccgtacgaggacagcacctgg
gagctaaaggatgatgtagatctaaataaaattgaggagtttgagcagctgcaggcagtc
aagcccgactcacgcagaatggagcgacctgccaccaatctgtggaagaaaatggaacat
tcgagggaatacaggaatggcaacaccctcagggactaccagttggaaggtgtcaactgg
cttctctttaactggtacaacagacgaaactgcatcctggcagatgagatgggcctggga
aagaccattcagtccatcacattcctagaagaaatttatcgtatgggcatcaaaggacca
ttcctcattattgcccccctttccaccattgccaactgggagcgggaatttcgtacttgg
acctatctcaatgccattgtgtaccatggaagcatggtcagcaggcagatgcttcaacag
tatgagatgtatttcagggattcacagggccgtgtgttgcggagtgcttacagattccag
gctgttatcaccacgtttgagatgattctggggggctgtcctgaacttaacgccatagag
tggcgctgtgttgtcattgatgaagcccatcgcctaaagaacaaaaactgtaagctgcta
gaaggcttcaagctcatgaacctggaacacaaggtcctgcttacaggtactcctctccag
aacacagtggaggagctcttcagcttgctgcattttctagagccggcacgctttccctca
gaaaacactttcatgcaagaatttggagaccttaaaactgaggagcaggttcagaagctt
cagggtatcctgaagccaatgatgctgcgtcgattaaaagaggatgtggaaaagaagttg
gctcccaaagaggaaacaatcattgaggttgagctcactaacattcaaaagaaatactac
cgtgccatcttagagaagaacttttcttttctggccaaaggagctggccaggcaaatatg
ccgaaccttgtcaacaccatgatggagttaagaaaatgctgcaaccacccctacctcatc
aaaggagcagaagagaaaatcctggaggattttagagaagtgtacaatccagctgcagtt
gactttcacctgcaggctatggtacagtctgctggcaagctggtccttattgataagctg
ctacctaagatgaaggctggaggtcacaaagttctcatcttctcccaaatggtgcgctgc
ctggacatcttagaagactacctcattcagagaaggtacttgtatgagcggatagatgga
cgtgtgcgtggaaacctgcgccaggcggccatagaccgttttagtaaacccgactcggag
cgctttgttttcctcctgtgtaccagagctggtggtctgggtatcaatcttacagcagca
gacacatgcatcatctttgactctgactggaacccacaaaacgacctgcaggcccaggct
cgctgccaccggatcggtcagaacaaggcagtgaaagtgtatcgtctaatcaccaggaac
tcatacgagcgagaaatgtttgaccgtgcaagcctcaagcttggcctggacaaggctgtg
ttgcagagtatgagcggtcgagataacagcctgggaggaggtccagggggaggggcagcg
cagcagcagttatcaaagagggagattgaggatctgttgaagcgtggtgcatatggggca
atcatggatgaggaagatgaaggggcaaagttctgtgaagaggatattgaccaaatcctc
caacggaggacaaagaccatcaccattgagtccgaaggacgagggtccacatttgccaag
gctagttttgtagcttctggtaaccgtacagacatctctctggatgacccaaacttctgg
gacaaatgggccaaaaaggctgacattgacatggaaatggtcaatggcagaaacagcctg
gtgattgacaccccccgtgtcagaaagcagacaagaccgttcagtgccaccaaggatgag
ctggcagaactttcagagggtgaaagtgatggagatgaaacaaaacccaagttcaggcga
aacaacgaacgcctcaacagctatggacgcactgaatgttttagagtggagaagaacctg
ctggtttatgggtggggtcgttggaaggacattctggctcatgggcggtttaagaagcag
ctgactgagtgggacgtggaatccatctgcagggccctgttgtcttactgcctggtccat
taccgtggagatgacaaaatcaaaagtttcatgtgggacctgattgcacccacggaggat
ggtcgcaccaaggagcttcagaatcacttgggtctttctgcccctgttccacggggcaga
aaaggcaagaaggtgaagactcagtccagttcttttgacattcacaaagccgagtggctt
cggaagcacaacccagagcacatccttcaggacgacggctacaagaaacacctcaaacac
cactgtaacaaggtgctgctccgcgtcagaatgctctactacctgaaacaagaggtaata
ggaagcctggcccagaacgtgctggatggggcagactccagtgagattaagatttgggtt
cctgatcttgacaactctgaactgccagccttgtggtgggatgccgtctctgacaagtgc
ctactgctaggagtctttaagcatggttatgaaaagtacaacaccatccgtgcggaccct
gctttgtgctttgtagaacgtgtggggcgaccagatgagaaggccatcgcagctgaacag
agaggcaatgacttcatggatggggatgtagatgatccagaatacaagcccgcccctgcc
ctgctaaaggacgatattgaggatgatgcctcctctcccggagatttggttgttgctgac
aatgctggagaaccagttccgcagacagaaggtcaaaccatctactggccttcaccctca
gtgctgacagctcgattaaggcgtctgatcacagcctcccagcgtttcaccaagagccga
cagatcctccaaatccaccaaacccagtctcagtcacagccaaccatgatgctttctggt
ccactctaccctttaccctctgcattcaacgacaccttcaaccccaaaatggctgctaag
atagaacgccagcaaagatggaccaggcgagaagaagcagatttctaccgcgtggtctcc
acatttggtgttgttttcgacccaaaccttggcaggtttgactggaccaagttcagggcc
atggcacggctgcacaagaagactgacgagagccttcaaaaatacctatgtgcttttgct
gccatgtgtcgacgggtgtgtcgcttaccaccaaaagaaggagactctgtggtggacccc
tcactgaacattcagcccataacagaggagagagcatctcgaactctttacagagtagag
ttgcttcgccaagttagagaacaagtacttcgccatccattactctacgatcgcctgtct
ctgtgccagatgagctctgacttacctgtctggtgggaagctggcactcacgaccgcgac
ctgctaattggtgcagcgaagcatggagttagcagaacagactaccacatcctgagagat
ccggagctcagcttcatggttgcccagcgcaaatacagccaaacaaaagctccacagcaa
cagcaatcatgcacacccacgtctcttctacaccctcagagccaggtctccagcttcatg
ttgacaggctccccgctgccaccaccagcccagagagatgcagatccctgtagtattgtg
cccaaagtggaaccagcatctgagggggaagagggcagagagaagcagggggagaggtgg
agtcctccaccaccagctactccaacaggactagaagagaaacctgttccagaggtgaag
gacggcgagcaacagatggtggcagctcgaaccaaacctctgacacccaattcctctgag
aggaaacccaaaaaacccagcaagagaggccgcagagaggcgaggcgtggctccgaatcg
gatggatcttcctcaagttcttcatcacgctcctcctcttcctcatcctcatcctcttct
tcctcatcacactctggctccagttcctcttcctcttcatcatcgtgctcgtctggttct
tcttcatcatcgtcttcctcttcatcatcttctgatgacagtgaaagtgagggcgaagaa
cggaagaagaaagtgcctgctgcaacgagtgtgaagggttttgatgaggacagtgtggcg
tctctgagcactacacaagatgagacacaagtagctgaaaatggcattgccaacagctca
tcccatcctttacaggaaggaggttacatgcttgctgcatcctactggccaaaggatcgt
gtgatcattaaccgcctggacagcatctgccaagcagtgctaaagggcaagtggcctgaa
acacggcgggtatatgagcctggaggtgctgtggcctctttctacaccaccaagctgcta
gacaacgccaacagcctgtgcgaggacccatcggcctcaccacaggggtcaaaggtgacc
aagcatgttgcagaaaacaaggagttctcagtaaaactcaatgaacaggagggaggtctg
aagttgaccttccaaaaacaaggtttacctttaaagagaccgctggagtcagaagaggga
ccacaggcccagcagcagtacctggcccgccttcacgagctacagaatgcctcggacaca
ggcctggctgatatcaccaagcctcagtgcagcttccagactgtgcctgcagattttgct
ggtcagatgagattaaatggtgtgcttgacagccaaccagtggtaaagaagaggagaggg
aggagaaagaatgtagagggaatggatctccttttcatgaacaagagtagagtccctgct
gttcctgaacagatgcctcaaggatggggtggaattggccaggtaggcatgggtgcaacc
cctgcgctacaatactgccagagctccactcagggtaccccagatactgagagcagggtc
cctgtcatcaaccttaaagatggcacccggctcgctggcgatgatgcacccaagaggaaa
gatttggaacagtggctaaacgagcaccctggctttgtggcagacacaggagccttcatt
cctggggtaaataagatgcagatgcagttccatttccaggatggtcgacccaaacagaag
aggcatcgctgcaggaacccaaacaagatagatgtgaacagtctgactggagaggaaagg
gttcagatcatcaataggaggaatgcacgcaaggtcggtggagcttttgctcctcctctg
aagaacttgtgccggttccttcaggaaaatcccgagtacggagttccacccgaatgggct
gatgttgtcaagaagtctggttaccttccagagagtatgttcgacaggatcctgacagga
cccattgttccagaggaggtgagtcgacgtggacgtcgaccaaagaatcctttggcgaag
gcagcggcagcagcaactaacccgtcagcctctgctctgggtttgaatcccatgctgacc
aatggccttctctccggactggacctaagcagcctgcaggccttccaacagaacctgcag
agtttacagtccctgcagctcaccacaggcctgatggggctgccgtctgatgctagcaac
atggctgcaagtaacttggctgccatgtttcccatgatgctctctggtgtgcccggattg
ccaaatctgctcggtatgaacaacttggttggaaagtcccctcaggacggcacagaggga
tctgaggagaaggcaaagggaacctcctgtggtagagccgccgagccgtcagactcgaag
gcagcacctcacacctcagacaccaaaggagaaaggacagagatcacaactccttcctcc
acttccagctcttcttcctcttccgctaccccatcaagtgcttcggctgcgtctgcagca
tccagtcaccaattgtcacttaaccccttgttactgtccagtatgctttacccagggatg
cttctcactccaggccttaaccttcccgtgtctgccacacagtcgcagaactcaaacact
gacacaaccttttctactccccctcctccaccacctgccgtctcccagtcaaacacacag
aaaacggagcagccggcagtgaaggaagaagaggaggatgaattggaaggcaccttggat
gaagaagatgaagagtcagcagaacaaaaggaaaacagtggtcctgaaggttctggcaaa
gcagaatcatcgtcgtcatcgtcagattcaggaagctcttcatcctcatctgatgattca
gactcaagtgaagaggactga
DBGET
integrated database retrieval system
