Takifugu flavidus (sansaifugu): 130522010
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Entry
130522010 CDS
T09160
Name
(RefSeq) serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130522010
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
130522010
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
130522010
NCBI-ProteinID:
XP_056881883
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All DBs
Position
3:complement(3600302..3606345)
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AA seq
831 aa
AA seq
DB search
MGDSDDEFDRRRRDKFRRERSDMERSREREDRRRDEWQDREWDRSRERRRDYDRGRRERF
SPSRHISPQHKRMRRDWEDHRGEPYRYELPYGGGGGIYPGMGPQGWHPDFPPMHPHPGGH
PLQGRLGMVDPDLPPPGPPTLKSFKEFLLNMDDNVDETESVKRYNQYKLDFRRQQLQDFF
LQHKDQEWFRSKYHPDDMAAKRAESLAALKARLRVFLFLLDNSWLDDVLLDTDHAPAIIK
LMDAAVIKMEGGTDFDLQVLEVPTALVVSGGEETRAGGRSQEATMGGNGVAPANTEDPGS
QGEEASGRKGRDRKGSKQNGADGGEEEDEEEVKMTKKDRKRKRSLSVDSGEGSASDSDSS
HSDGEKEEEEEDGEEEHRKERGKDREKLAPVKPRPLHLTTSLFIRSLPPEVSKDEITALC
HRYPGFLRVALSDPQPERRFFRRCWVTFDRSVNIKETCWNLQNIRLRDCELSPVVNRDLC
RRVRSVNGLTHHKPVVRNDIRLSARLIQSLDQRAELWAGQRETNPVLKNITDHLIEEVSA
EEEELAGTSGSNSDEDSSDVTVETDDVLLKVLDRLLLYLRLVHSVDYYNFCEYPAEDEMP
HRCGLMHVRGPLPVAKITPAEVGEHQKMCEERLAPLLNPLETLNDEDASKLGKKLPEQEV
ETFLSANSVELSKDKWLCPLSGKKFKAPEFVRKHILNKHAEKVAAVRQEVEFFNNYLLDA
KRPTPPENKPLPPPAQATPPGMPGFPAQSPQQQSLLGYPPGVRPPLPAFPGVAPPFPPNQ
FGVGRGNYDNFRGHVGGGGVPKQRNSRGLRGDPRSIIEYRDLDAPDDLDFF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcgatgacgagtttgacaggaggcgtcgggataaattcaggagagagcgg
agcgacatggagaggtcaagagagagggaggacaggaggagggatgagtggcaagacaga
gagtgggaccggagcagagagaggaggcgggattatgaccgtggtcggcgagagcggttc
tctccctccagacacatcagccctcagcacaaacgcatgaggagagactgggaagaccac
cggggggagccataccggtacgagctgccgtacgggggcggtggtggcatctacccaggg
atggggcctcagggctggcacccggacttccctcccatgcacccccaccctggaggtcat
ccgctgcagggcaggttggggatggtagatccagatcttcctcctccgggaccacccacc
ctgaagagttttaaggagttcctgttgaacatggacgacaatgtggacgagacagagtcg
gtcaagcgctacaaccagtacaagctggacttcaggcggcagcagctgcaggacttcttt
ctccagcacaaagaccaggagtggttccgctccaagtaccacccagatgacatggcagcg
aagagggcggagtctctggccgccctcaaggcgcgcctgcgtgtctttctcttcctgctg
gacaacagctggctggatgatgtgctgctggacacggaccacgcccccgccatcatcaag
ctcatggacgcagctgtgatcaagatggagggaggaacagactttgacctccaggtcctc
gaggtaccgactgcacttgtggtcagtggaggggaggagaccagggcaggagggaggagc
caggaagccacgatgggaggaaacggcgtcgctccggccaatacggaggacccgggaagt
cagggggaggaggcgagcggcaggaaggggcgggacaggaagggctcgaaacagaatgga
gcggacggaggtgaagaagaggatgaggaagaagtgaagatgacaaagaaagacaggaag
aggaagcgcagcctgtcagtggacagcggagagggcagcgcctcagactcagactcctcc
cactctgatggagagaaggaggaggaggaggaggatggagaggaagagcaccggaaagag
cgaggcaaggacagggagaagctggcgccggtgaagccccgccccctccacctcaccacg
tccctgttcatcaggagcctccctccagaggtgtcgaaggacgagatcactgctttgtgt
cacaggtatccgggcttcctgcgggtggcgctgtcagaccctcagcctgagagaaggttc
ttcaggaggtgctgggtgacattcgaccgcagcgttaacatcaaggagacctgctggaac
cttcagaacatcaggctcagggactgcgaactgtcccccgtggtcaacagagacctgtgt
cgccgcgttcgctcggtcaacgggctcacccaccacaaacccgtggtcaggaacgatatc
cggctgtcagcccgactcatccagagcctggaccagagggcggagctttgggccggacag
agggagaccaaccctgtcctgaagaacatcactgatcacctgatagaggaggtgagtgca
gaggaggaggagctggccgggacctcagggagcaacagcgatgaagactcctcagacgtt
accgtggaaacagatgatgtgctcctcaaggtgctggaccggctcctgctctacctgcgt
ctggttcactctgtggattactacaacttctgtgagtatcctgcagaagacgagatgcct
catcgctgtgggctgatgcacgtaagaggacctctgcccgtggccaagatcacgccagcc
gaggtgggtgaacatcagaagatgtgtgaggagcgtctggcgcctctgctgaaccctctg
gagactctgaatgatgaagatgcttcaaagctgggcaagaagctccccgagcaggaggtg
gagacgttcctgtcggccaactccgtggagctcagtaaagacaaatggttgtgtcctctg
agtgggaaaaagttcaaggcgccagagtttgtgcgaaaacatatcctcaacaaacacgca
gagaaggtggctgctgtccgacaggaagtggagttcttcaacaactacctgcttgatgcc
aagaggccaaccccccctgagaacaagcccctcccacctccagcacaagccacgccaccc
ggaatgccaggatttcctgctcagtcgccccagcagcaaagccttctgggatatccaccg
ggagtcagaccccccctgcctgctttccctggtgtggcgcctcccttccctccgaaccag
tttggggtggggcgtggtaactatgacaacttcagaggtcacgtggggggcgggggggtt
ccgaaacagcgaaacagcaggggcctgcgaggggatccccgctctatcattgagtacaga
gaccttgatgctcccgatgaccttgacttcttctga
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