Takifugu flavidus (sansaifugu): 130522012
Help
Entry
130522012 CDS
T09160
Symbol
cnga1b
Name
(RefSeq) LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
130522012 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130522012 (cnga1b)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130522012 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
Sec62
Tim54
Eapp_C
MDM10
Piezo_TM1-24
POP1_C
CDC45
SLC52_ribofla_tr
CLN3
Mat89Bb
Serinc
Phage_tail_tube_init
PFF1_TM
PBP_sp32
DUF4820
Zip
Motif
Other DBs
NCBI-GeneID:
130522012
NCBI-ProteinID:
XP_056881886
LinkDB
All DBs
Position
3:complement(3593705..3600082)
Genome browser
AA seq
636 aa
AA seq
DB search
MAKVAPSVQTPVCTLTPPTIVVQHMEAEPRVGRLFNVNNSNNKDEDEELKKKQKKEKQQK
KEKKKKKKKEKKKEEKKEEKKKEEKKKEEEKKNEPPKEVTVIDPAGNTYYYWLFVITMPV
MYNWTLIIARACFEELQTDYVVYWFIVDFICDLTYVADMVFRTRTGYLEQGLLVKDEQKL
RERYTSSFQFKLDLISMIPTDLLYLVLGIRYPEIRLNKLFRFNRMLEFFQRTETRTNYPN
FLRISNLVMYIVIIIHWNACLYYSFSKAIGFGSDRFVYPDPSDPEFGRLVRKYAYSMYWS
TLTLTTIGEXPPPVENSEYFFVVTDFLVGVLIFATIVGNVGSMITNMNAARAEFQARIDA
IKQYMSFRKVSKDLEKRVIKWFDFLWTNKKAVDEREVLKYLPDKLRAEIAINVHLDTLKK
VRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFV
VLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMXE
EKGRQILMKDGLLDLEVAAQGPDPKEMEDKVERMTGTLDLLQTRYARLLAEHEALHSKLK
HRVTRLEKKVVPPQAEQPGEAPPSAAPETTKDVEKK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtagctccatcagtccagacacctgtctgcaccttaactccacccaccatc
gttgtgcaacacatggaggcggagccaagagttggacgtctgttcaacgtcaacaacagc
aacaacaaggacgaggacgaagaactcaagaagaaacagaagaaagaaaagcagcagaag
aaagagaagaagaagaagaagaagaaagagaagaagaaagaagagaagaaagaagagaag
aagaaagaagagaagaagaaagaagaggagaagaaaaatgagcctcctaaagaggtgacg
gtgattgatccagcaggtaacacctactactactggctgtttgtgatcaccatgcccgtc
atgtacaactggaccctgatcatagccagggcatgttttgaggagctccagactgactat
gtggtgtactggttcatcgtggacttcatctgtgacctgacctacgtagcggacatggtc
ttcagaaccaggacgggttacctggaacagggtcttctggtgaaggatgagcagaaactg
cgtgagcgttacacaagcagcttccagttcaaactggatctgatctccatgattcccact
gatctgctgtatctggtcctcggcatcaggtatcctgagatccgcctcaacaaactcttc
aggttcaacaggatgctggagtttttccagcggacagaaaccaggaccaactacccgaac
ttcctccgcatctccaacctggtcatgtacattgtcatcatcatccactggaacgcctgt
ctctactattccttttccaaggccatcggttttggcagtgataggtttgtgtaccctgac
ccgtctgacccagagtttggtcgtctggtgaggaagtacgcctacagcatgtactggtcc
acgctgaccctcaccaccatcggggagnacccccccccagtggagaactcagagtacttc
tttgtggtcactgacttcctggtgggtgtgttgatcttcgccaccattgtcggtaacgtt
ggttcgatgatcaccaacatgaacgctgccagagctgagttccaggctcgcatcgatgcc
atcaaacagtacatgagcttcaggaaggtgtccaaggacctggagaagagggtcatcaag
tggtttgattttctctggaccaataagaaagcagtagatgagcgggaggtgctgaagtat
ctgcccgataagctccgagcagagatcgccatcaacgttcacctggacacgctgaagaag
gtccgtatctttgccgactgtgaggccggcctgctggtggagctggtcctgaagctgcag
ccgcaggtctacagtccaggcgactacatctgcaagaagggcgacatcggccgagagatg
tacatcatcaaagaaggaaaactcgccgtggtcgccgacgacggcgtgacgcagtttgtg
gtcctgagtgacgggagctacttcggagagatcagcatcctggcgataaaaggcagtaaa
gcaggaaaccggcgcaccgccaacatcaggagcatcggctactccgacctcttctgcctt
tccaaagacgacctgatggaggcgctaacagagtaccccgacgctaaagctatgnncgag
gaaaaaggacggcagattctgatgaaagacggactcttggacctggaggtggcagcacag
ggcccggacccaaaggagatggaagacaaggtggagcggatgacgggaacgctggacctc
ctgcagacgcgttacgcacgtctgctggcggagcacgaagctctgcacagcaaactgaaa
cacagggtcactcgcctggagaagaaggtggtgccaccacaagctgagcagccaggtgaa
gctccgccctctgcagcacctgaaacgaccaaagacgttgagaagaaatag
DBGET
integrated database retrieval system
