Takifugu flavidus (sansaifugu): 130522043
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Entry
130522043 CDS
T09160
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130522043 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130522043 (nhej1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130522043 (nhej1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Dit_C
Motif
Other DBs
NCBI-GeneID:
130522043
NCBI-ProteinID:
XP_056881950
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All DBs
Position
3:11288619..11298900
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AA seq
320 aa
AA seq
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MEAGEAASEVLLQLPWLPMNISGCQLLTKSWFGETTYHLLLTDTHCVWEERAGSLDIQKR
AQELNRRLRAPVEAFFTHLCQVARPCLSGSDSQSDGGAQISLIRQDDGDLRVKLKSELAG
LPFYWEFHCSLSPVTVACAQLVRPLLAMNHLLQRQVMDLEDLLVRKDAEIQDYKENGASL
SRERLQTSVFEEQTFRNDFMAKTLPLLSSDQQLVLNFHADLQNLYAAVVQHSNARRRKRK
LSEEERPAAEDADVSPQAVAEGVTTTGTGEDKQQRQSAQADAEESKMADRAPTKQVPLLP
SDPAERASSKPKKKKVGLFR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggtgaggctgcgtctgaagtcctgctgcagcttccctggcttcccatgaac
attagcggctgccagctgctcaccaaaagctggtttggtgaaaccacgtaccacctcctg
ctgactgacacccactgtgtgtgggaggagcgagcaggttcactggacatccagaagagg
gcgcaggaactcaacagacgtttgcgagcacccgtcgaagccttcttcacccacctgtgt
caggtggcacggccctgtctgtcaggaagtgacagtcaatctgatggtggcgcccagatt
tctctgatacggcaggatgacggcgacctgagagtgaaactaaagagtgaactggcagga
ctgcctttctattgggagtttcactgcagcctttcacccgtcactgtggcatgtgctcag
ctggtgcgcccactgctggccatgaaccacctgctgcagcggcaggtgatggacctggaa
gacctgctggtgaggaaggatgctgagatccaggactacaaagagaacggagcctcactc
agcagagagcggctgcagacaagtgtgtttgaggaacagaccttcaggaatgacttcatg
gcaaagactcttcctctgctgagctcggaccagcagctggttctgaacttccacgccgac
ctgcagaacctgtacgcggccgtcgtccaacacagcaacgctcgaagaaggaaacgcaaa
ttgtcggaagaggagcggccggccgccgaagacgcggacgtctcgcctcaagcagtcgca
gaaggtgtgaccaccactgggacaggtgaggacaaacagcaaagacagagcgcgcaggcg
gacgccgaggaatcaaagatggccgacagagcccccacgaaacaggttcccctgctcccg
tctgaccctgccgagcgagcgtcctccaaaccaaagaagaagaaggttggactgttcaga
tga
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