Takifugu flavidus (sansaifugu): 130522173
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Entry
130522173 CDS
T09160
Symbol
zc3h13
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130522173 (zc3h13)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130522173 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130522173
NCBI-ProteinID:
XP_056882205
LinkDB
All DBs
Position
3:16889477..16900102
Genome browser
AA seq
1768 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSNTTTSSTCNPAAPSRRPSVFERLGPSTGSNAADSHCRNW
LKTGNCSYGNTCRYTHGTQPRGKGFNFSRSAERPTGDLRERMKNKRQDVDPENLKRDVDE
PTSPTARRDSSRGRRREKEDIKITKERTPASEEEPTEWETNREDSDIGDYDYELSLEMKR
QKIQRELMKLEQENLEKREEIVVKKDETPSKARVTAVPKASPDQLTVKNTPSPRKSSRSP
KHKSGTKGLGSGKKEKKGTVSSPVSEPTKSSKGSHSKKKGPRTPSPPPPVPLDIPVVGKK
HKNKHKNKEKSEEKQKEGKDRGRDTEKHKEKKEKRRDRSDSSHKAKWAVTSEEHSGSVSS
PSRGASPPPRKKSSSPKASHKISALSSPPNSSPSPPRHRRSPSPRHRSPSSHSGSSAQRH
SSSPRRRRSSSPTYHRSIAGSAGSPLSSRRSRSPFTSHDASSPHRRSERSSPSQRHSRGR
ERFRGERERSLPAQERRNERRDENRNKREKDSVRDERDYDSELSSRDTRSERDTRESRDR
RDARERGRETTRDSRDNRDTKDSRESRTETRSSRESLGSRERDRDREKDKEREKERERDR
SDTQRKEDTTQEDRSYVRGHGREDSKTDRAEKNGRVRSRANESSDKGSNRNTRGSQLESS
NDVWESRSSAARERSVERSNDRSAADRSSERGSDRDRYESDRRGEPSRDSSYDRRGGHGE
RDRRDNRDRASPSRYQGRSEDSEREERREDRRTDRTEERREDRTRDRERERDREREKEKE
RDKEREKEREAERERARERERERERDREREREEREREREEREREREERDRERKERERERE
KEREQRERERQREWEERERGREERRDRREDSRDERSIRDSRDDRKMSRKRPRVESSPSPR
TTPKRGARDLSPADSDGYNSGEEKSSDKHRLLSQVVRPQESLVRTPPRSTSSDDKSGHWK
DEERRGTLDKRDTRHLDDLESRGERSRGDRRGELLVESHSDSRSRGRDSTPLPASFSLPT
GSEERDTASSQSHEEGKKKTKXQKKGLKKLRKEDESVGNTNSGDRFNPEPPAAATSDGPQ
PLYSPRKGAKKKALERKRKRSRGADSDLSDEDSSAQQPQSKRKRGPRTPPPSMRPDRRGN
AEPSPLSKMDNFSDWSDEEVTERGGAPLEAPAAPAERTPTEPFRRGGPRVGRDRERCNPP
AIAPLIPQDPPMLLQTLTPQPLMSQTLLRKPPLEQTRSSSMGSNQSRASSKRLRSPSNES
AHRDDPQGQRSRRGRLQGANCRDRDRERERERERDRERERQVNDPPGAERKSRIDQLRRG
EPSRSTSSDRQDSRSHSSRRSSPDSERQARSRAGSYDSRERERDREPFERERERKDHRPQ
QQPQQPLLLQQPLQQQRDWEPEPRDWPSRGREPLLMRPGREPLLRERDIRDRERLLPEGL
IQQHERDRDGRGDRGSDRERERMTMDQPPHTDPRAPGRGDPRVEMRGDLRGDMMRQDRSD
YEPLLPREAFSPSEQEKPSNSLHLTEDQRELEKADSIDGDDERKDNDGESVASVGEEYEP
ISDDELDEILADSQKKEDQQDEEKITGPLDVIDVDWSSLMPKHKQEPRAAGAALLRFTPG
AVLLRAGISKRLAGPDLLEQVREVCKRELEDPKDAQKLFEQDLGALNRRTEKTSLLSNLG
PYCKALCARRDFAIRRQLLKNDKGLTKQYPTTPVVDNELLQMSMRLFRRTMAAQTSGLEK
PDSGAAAADVAAPAANKVSTAQPEGCVS
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaagtaacagtggagaattctaagaccatatctgacagtagc
agcaacaccacaaccagcagcacctgtaaccccgccgccccatcccgccgacctagtgtc
tttgaacgacttggtcccagtactgggagtaatgctgctgatagtcattgtagaaattgg
ttgaagaccggtaattgcagttacggtaacacgtgccgatacacacatggaactcagcca
cgaggcaaaggttttaatttcagtcgatcagctgagagacccacaggagatttacgggag
aggatgaagaataagagacaggatgttgacccagagaatttaaaacgagacgtagacgaa
cccacatcacctacagctagaagagattcctccagaggccgacgcagggaaaaggaggat
attaaaatcacaaaggagcgcacccctgccagtgaagaagaacccaccgagtgggaaact
aatagagaagactctgatatcggagattacgactacgagctatccttggaaatgaagcga
caaaagattcagcgtgagctaatgaagcttgagcaggaaaacctggaaaaaagggaggaa
attgtggtaaagaaagatgagactccgtccaaagcacgagtcactgccgtgccaaaggca
tctccagatcagttaacagttaaaaacacaccgtcgcccaggaagtccagcagatcccca
aaacacaaaagtggaactaaaggtctgggctctggaaagaaagagaagaagggaactgtg
tcatcacctgtttcagaacccaccaaatcttcgaaaggaagccacagcaagaagaaggga
ccacgcacccctagtccccctccaccagtccctttggatattcctgtggttgggaagaag
cacaaaaacaaacacaaaaataaggaaaagtcagaggagaagcagaaagaaggaaaggat
cggggacgggatacagaaaagcacaaagagaagaaggaaaagcgaagagaccgttcagat
agttcccacaaagccaagtgggctgtgacttccgaagagcattccggtagtgtgtcctca
ccttctaggggggcttcacctccacccaggaagaaatcttcttctcctaaggcatctcat
aagatatctgccctatcctccccccctaacagttctccttcaccgccgcggcaccggcgc
tcaccctctcctcgtcatcgctcgccatcctcccactcgggttcctctgcccagcggcat
tcttcgtctccgcgtcggcgacgctcttcctccccgacctaccaccggagcatagcgggc
tcggccggttcacctctaagttcccggcgttcccgatcgcctttcacctctcacgacgct
tcatcgccccaccgccggtctgagagatcaagccccagccaacggcactcacgtggtcgg
gagaggttccgaggtgaaagggaacgaagtttgcctgcacaggaacgcaggaatgaacgc
agagatgaaaaccgcaacaagagagaaaaagatagtgtccgtgatgaaagagactatgac
tcggagttgtcttcgcgggacactcgcagtgaacgggataccagggagtcacgtgaccgc
cgagatgcccgtgaaagaggacgagagaccacaagagactctcgtgacaacagggacaca
aaagactctagagagagtaggacagagacccgctccagtcgagaatctctcggaagtcgg
gaacgggaccgtgacagggagaaagataaagagcgagagaaagaaagagagcgggacagg
agtgacacacagaggaaggaagacacaacacaggaggacaggagttatgtcagagggcac
ggacgcgaagattcaaagactgacagagctgagaagaatggcagagtgcgaagccgtgct
aatgaatcatctgacaaaggctcaaaccggaacacccggggctctcagctagaaagcagc
aatgatgtttgggagtcacggagcagtgcagcgcgagaacgaagtgtagagaggagcaat
gatcgcagtgctgcagatagaagctcagagaggggttcagaccgggaccgttacgagagc
gaccggagaggagaaccctcccgggactcctcctatgacaggagaggaggtcatggagaa
cgagaccggagagacaacagagacagagcatcgcctagcagataccaggggagatcagaa
gattctgagagggaagagaggagagaggaccgcagaactgaccgaacagaagagagacga
gaagatagaacgagagacagagagagagaacgagacagagagagggaaaaagagaaggag
agggacaaagagcgagagaaggagagggaggctgagagggagcgggcaagggagagggaa
cgggagagggagcgagacagagaaagagagagggaagagcgggagagagagagggaggag
cgggaaagagaaagagaagaacgggaccgtgagaggaaagagcgggaaagagagagggag
aaagagagggagcagagagagcgagagaggcagcgtgagtgggaagagcgggaaaggggg
agagaagaaaggagagacaggagagaggactcccgggatgagcggtccatccgggacagt
cgtgatgaccgtaagatgagtcgtaagaggcccagggtggagagcagtcctagtcccaga
accactcctaagagaggagcccgggatctcagtccagctgacagtgatggttacaacagt
ggagaagaaaaaagtagtgacaagcatcgtctactaagccaggttgtgcgaccccaggag
tccttggtcagaaccccaccaaggtccacttcatctgatgacaaatccgggcactggaaa
gatgaagagcgcagaggaacgttggacaaaagggacacacgccaccttgatgatttggaa
tcacgtggtgaacgaagcaggggcgacaggcggggtgagctgcttgtggaaagccatagt
gactcccgtagcaggggcagagactccacgccacttccagcttcttttagccttcccacc
ggtagtgaggaaagagacactgccagctcgcagtcacatgaagagggtaaaaagaaaaca
aaangccaaaagaaaggcttgaagaagcttcgcaaagaagatgagtctgtaggtaacact
aattcaggggatcgttttaaccctgaacccccagctgcagctacctcggatggaccgcaa
cccttgtattcacccaggaaaggagccaagaagaaggccctcgagcgaaagcggaaacgg
tcacggggagcagattctgacctgtcagatgaggattcatcagcacagcagccacagagc
aaaagaaagagggggccacggacaccaccaccctcaatgaggcccgatcgacgtggtaat
gcagagccatctccactttccaaaatggataatttcagcgactggtcagatgaggaggtc
actgaacgcggaggggcaccgttggaagctcctgcagctccagctgaaaggacacctact
gaaccttttagaaggggaggccccagggtgggcagggaccgggagcggtgcaaccctcct
gccatcgcccctctcattccccaggatccgccgatgctgttacagactctgaccccacaa
cccctcatgtcccaaacccttttacgaaagccccctctagagcagacgcgcagcagcagc
atgggaagcaaccagagccgggcatcatccaaacgacttcgctcgccatccaacgagtct
gcccacagagacgaccctcagggtcagcgctcccgcaggggccgcctgcagggggccaac
tgtcgggaccgggatcgtgagagagaacgggaaagagagcgggatagggagcgagagagg
caggtgaatgacccaccaggagcagagaggaagtctcggattgatcagctgaggagagga
gaacccagtcgcagcacttcatcagatcgacaagactctcgcagccacagttctagacgc
agctctccagactctgagagacaggccaggtcccgtgctggttcctacgacagccgagaa
agggagcgagaccgggagccatttgaacgagaaagagagcgtaaagaccacaggccccaa
caacagccgcagcagccactgctgcttcaacagcctttacagcagcaaagagactgggag
cccgagcccagggactggccgagccggggtcgagaacctcttttgatgcggcctggtcgt
gaaccgcttttgcgggagcgggatataagggacagagaacggttacttcctgaaggactc
atacaacagcatgagcgggatagagatggcagaggggacagaggcagtgatcgagagagg
gagagaatgacaatggaccaaccaccgcacactgaccccagggctccaggacgaggggac
ccgagggttgaaatgagaggagatctgcgaggggacatgatgaggcaggacagaagcgat
tacgagccgctattgccaagagaagctttcagcccttcagagcaggagaaaccaagcaat
agtctccatctcacagaggaccaacgtgagctagagaaggccgacagtattgacggggat
gacgaaaggaaagataacgatggagagtctgtggcatctgttggtgaggagtacgaaccg
atcagcgatgatgagttggatgaaatattggctgacagtcagaagaaagaggatcagcaa
gatgaagagaaaattacgggtcctctggatgtgattgatgtggactggtccagcctcatg
cccaaacataagcaggaaccccgtgcagctggggcagcattgctgcggttcacaccaggg
gctgtccttcttagggcaggtatctccaagcggcttgctgggccagacctgcttgaacaa
gtgagagaggtttgcaagcgtgagctggaagatcccaaagatgcacagaagttatttgag
caagaccttggggccctgaataggcggacggagaagacaagcttattaagcaacctcggt
ccctactgcaaagccctatgtgctcgcagagacttcgcaattcgtcgacagctgctaaaa
aatgacaagggcctcactaagcagtaccccaccacaccagttgtagacaatgagctgctg
cagatgagcatgcgtctcttcaggaggaccatggctgcccagacatctggcttagaaaag
cctgatagtggcgcagcagctgctgatgtggctgcacctgctgctaataaagtcagcaca
gcacagccagagggctgtgtgtcatga
DBGET
integrated database retrieval system
