Takifugu flavidus (sansaifugu): 130522294
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Entry
130522294 CDS
T09160
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130522294 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130522294 (taf6l)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130522294 (taf6l)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130522294 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
130522294 (taf6l)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130522294 (taf6l)
STAGA complex
130522294 (taf6l)
TFTC complex
130522294 (taf6l)
SAGA complex
130522294 (taf6l)
SLIK complex
130522294 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
130522294
NCBI-ProteinID:
XP_056882455
LinkDB
All DBs
Position
3:complement(8255576..8260206)
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AA seq
639 aa
AA seq
DB search
MNDRDERRFAEVSHESVRLMAESAGVELDDDVAALLAEDVCYRLREATQSSSQFMKHAKR
RKLTVEDFNRALRWSNVEAIFGCGAQDATPFRSLKDGELFLVEDRDVNLVELALATNIPK
GCAETVVRVNVSYLDGKGNLESQGTVPTAVQSLSDELMKYYHQVTRAILGDDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVRNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWIHGDLVGGLYHQVLLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDNSVSNAQVKADGHKVYG
AILVAVEQLLKLKALSQPAEGAHTGPLGSVLGATAYNMRSPGLSPPPESLSDAASGIASH
LQAGGACCPWEEWTPVSLPAMYSELYSFFGDSLAVRFSTGSGFGSCPPCTLFQLNDAKKE
LPSSASNSETTRKMPQLTANLNISPSQDGSPCPDSQLPSLTAAGSGRSLARSSSSSVQRS
RSYTSRSGQHSAGPPRDIFPKACFTSNQIGHPGFSFLIGGRQMGRRCQGRRPFQTTFTPT
LPFSAIPPRVFAHKLPVIGRVGKPVRHWTRSHYSLHLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccgggacgagcgtcgcttcgcagaggtttctcatgagtccgtcagactcatg
gcagaaagcgcaggagtcgagctcgacgacgatgtggctgcgctcctggccgaggatgtg
tgttaccgcctcagggaagccacgcagagtagctctcagttcatgaaacacgccaaaaga
agaaagctgacggtggaggacttcaacagagctctgcgctggagcaacgtggaggcaatt
tttggttgcggggcccaagatgcaaccccatttcgttcactgaaagatggcgagcttttc
ctggttgaagatcgagacgtcaacctcgtggagctcgctttggccacgaacattccaaag
ggttgtgccgaaactgtagttcgggtgaacgtgtcttacctggatgggaaaggcaacctg
gaaagtcagggcacagttccaactgcagtgcagtctctgtccgatgagctgatgaagtat
taccatcaggtcacacgagccattctgggggacgacccccacctcatgaaggttgctctc
ttggaccttcagtcaaactccaagatcgctgccctcctgccctactttgtttacgtcatc
agtggggtgaaatcggtcagtcacgacttggagcagctcaacaggctcctccacatggtc
aaaagcctcgtccggaacccttacctctacctgggctcctacgtacgcagcctagtgtcc
agcgtcatgtactgcatcctggagccactggctgcatccatcaacccgctcaacgaccac
tggaccctcagggattacgctgccctgctgctcagtcacatattctggattcatggtgat
ctggttggtggtctctaccatcaggtcctgctctcgctccaaaaggttctgtctgatcca
gtcagaccattgtgctctcactacggagctgtggtaggacttcatgccctgggctggaag
gctgttgaaagagtcctgtttccacatcttcctgcctactgggccaacctccaggctgtg
ttggatgacaactctgtttccaatgcacaggtcaaagctgatggacataaggtctatgga
gctattttggtggcagtggagcagttgctgaagttgaaggctctttctcagccagcagag
ggagcccacactggtccgctgggctctgtgctgggtgcaacggcctacaacatgaggtcc
cccggcctcagtccccctccagagtctctgtccgatgcagcctcgggaatagctagccac
cttcaggcgggtggggcctgctgtccctgggaagaatggaccccggtctctctgcctgcc
atgtactcggagctctactccttcttcggtgacagtttggctgtcaggtttagtactggg
tctgggtttgggagctgccctccctgtaccctgttccaactcaatgatgctaagaaggag
ctccccagctctgcttctaacagtgaaaccactcgaaagatgcctcaattgaccgccaac
ctcaacattagccccagccaggatggaagtccttgtcccgattcgcagttgcccagcctt
acggccgctgggtcgggcaggtctttggctcgctcctcttcatcttctgtgcagcgctcc
aggagctacacatcgcggtcaggccagcactcggccgggccgcctcgggacatcttcccc
aaagcttgtttcacctctaatcagatcggacatccaggattctctttccttattggaggg
cgtcaaatgggccgtcgctgccaaggccggcgcccatttcaaaccacttttacgccgact
ttacccttttctgccatcccaccgcgtgtgtttgcccataaacttcccgttattggtagg
gttggaaaacctgtacgccactggacacgttcccattactcccttcacctgccactttag
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