Takifugu flavidus (sansaifugu): 130522458
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Entry
130522458 CDS
T09160
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04140
Autophagy - animal
tfs04148
Efferocytosis
tfs05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130522458 (vps16)
04148 Efferocytosis
130522458 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130522458 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130522458 (vps16)
Membrane trafficking [BR:
tfs04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130522458 (vps16)
Hops complex
130522458 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF4298
Motif
Other DBs
NCBI-GeneID:
130522458
NCBI-ProteinID:
XP_056882848
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All DBs
Position
3:complement(9289675..9298589)
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AA seq
834 aa
AA seq
DB search
MTFITANWNPLGDAFYRKTELYDMCWDLKDALRDCLVAAAPYGGPIALLRKPLRCSPSSR
PQLEIYSASGFAITSFPWKSGPLVHLGWTITDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQNQVLEAKVFHSPFGTGVAIISGSSHFTLATNVDELKLRRLPEVPGLQGKPLCWAVL
VQDRQIKVLLSSGPELYILDDTSCSEVHPPWLSPQAGSIIHMSVSFSYKYLALFTDTGHL
FTASSDLQNKLSEIDTKRSTAPEQMVWCRRPNSQQPSVVLLWDRLLMVAGVCNDTIQFPI
EDQCVLVGEMDGVRILSTRSHELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLRELKEQSMLEEAVKQCVGAARYEYDPQTQKSLLRAASFGKCFLADFSADPFVETCR
ELRVLNAVRVSSVGLPLTYPQFKHLTLQVLIDRLVYRQLYPLAIKVCHYLKIPDYHGVSR
VLRHWASCKVQQKDLSDEAIAKAVCAKVGDSPGFSYSHIAAKAYECGRAELAIKLLDFEA
RSGEQVPLLLKMKRSHLALSKAVESGDTDLVYMVVTHLKNEMNRGDFFMTLRNQPVALSL
YKQFCKLQEQETLKDLYNQDDDHQELANYYVSASYREKRMDIRLSLLQSAVDEYNKAKND
FAAKATEDEMRLLRFQRKLDEDKATELLGLSLQATMEALLALGFHKQAEQLYRDFKVPEK
RYWWLKLKSLAKKEEWEELEKFSKTKKSPIGYLPFVEVCMKRNNKYEAKKYVSRVMPEQK
VRAHLAISDLEGAADAAIERRNESEIGIVLSRCAASDRLLIERLNRARTSTVKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcatcacagccaactggaacccgctgggagatgcgttttatcgtaaaactgag
ctgtatgacatgtgctgggacttgaaggacgccctcagagactgtcttgtggctgctgct
ccatatggaggaccgatagctctcctaagaaaacctcttagatgttctccgagttctcgt
cctcagttggagatttattctgcgtctgggtttgccatcacaagcttcccgtggaagagt
ggtccccttgtccatcttggttggacgattaccgatgagttgctatgtattcaggaagac
ggatctgtactgatctatgatctgtttggttccttcaagaggcatttcagtatgggtcag
gaagtggttcagaatcaggtcctggaagccaaagtattccactctccatttggaacaggt
gttgccatcatatctggctcctcccattttaccttggcaaccaacgttgatgaattgaaa
ctgcggaggttacctgaagtcccaggtctgcaggggaaacctttgtgttgggccgttctc
gttcaggacagacaaatcaaagtcctcctgtccagtggccctgaactttatatcctggat
gacacgtcctgttctgaagtgcatcctccatggctcagtccccaggctggcagtatcatc
cacatgtctgtgtcgttcagctataaatatttggccctttttactgacactggacacctg
tttacagcctcttctgatctccagaacaaactgagtgaaattgacaccaaaaggtcgaca
gcacctgaacagatggtctggtgtcgcagaccgaacagtcagcaaccgtctgtggtgtta
ctgtgggacaggctgctcatggtagctggagtttgtaatgacacaatccagttccccatc
gaggatcagtgcgttttggttggagagatggatggagttcggatcctcagcacgaggagc
cacgagctgcttcaggaagttcctctggtctgtcaggatatcttcaagattgcctccatg
gcccctggagctttgctgctggaggcccacagggagtacgagaaatcaagtcagaaggct
gacgagtacctgagggagctcaaagagcagagcatgctggaggaggcagtgaaacagtgt
gtgggggctgctcgatacgaatatgacccccagacccagaaatctctgctgcgggcggcg
tcgttcggaaagtgttttctggcggacttcagcgcagatccgtttgtggagacctgcaga
gaactgcgcgtgctgaacgccgtccgagtgagcagcgtggggctgccactcacatatcct
caattcaaacatttgactctccaggtgctgattgacaggctggtgtaccggcagttgtac
ccattagcaataaaagtctgccattacctgaagattccagattatcatggtgtcagcaga
gtcctcagacactgggcgtcctgcaaggtgcagcagaaggacctgtctgatgaggccata
gcgaaggctgtgtgtgcaaaggtgggcgactcgcctgggttttcttactctcacatcgca
gctaaagcgtacgaatgtggacgtgctgagctcgctatcaagctgttggattttgaggct
cggtctggagaacaggttcctctgctgctgaagatgaaacgcagtcatctggctctcagc
aaagctgtggagagtggagacactgacctggtttacatggttgtgacccatctaaagaat
gagatgaaccgaggagatttcttcatgaccctgaggaaccaaccagtcgcactgagtcta
tacaaacagttctgtaaacttcaggagcaggaaacgctgaaggatctttataaccaagat
gatgatcaccaggagttggccaactactatgtttctgccagttacagagagaagaggatg
gacatccgtctgtccctcctgcagagtgccgtcgatgaatataacaaggcaaagaacgat
tttgctgcaaaggccaccgaggacgagatgcgactcctgcgttttcaacgaaagctggac
gaggataaagcaacagaactcctgggtctgtctttacaggccacgatggaggctctgttg
gctttagggttccataaacaagcagaacaactttacagagacttcaaagttccagaaaaa
aggtattggtggttaaaattgaagtctctggcaaagaaagaggagtgggaggagttagag
aagttttccaagaccaaaaagtctcccatcggctacctgccttttgttgaagtttgcatg
aagcgtaacaacaagtacgaagccaagaagtatgtttccagggtgatgccagaacagaag
gtccgggctcacctggcaatcagtgatcttgagggggctgctgatgctgcgattgagcgc
aggaatgagtcggagattgggatagtcctctccagatgcgccgcctctgatcgccttttg
attgaaaggctgaaccgagccagaaccagcactgtgaaaaaataa
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