Takifugu flavidus (sansaifugu): 130522581
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Entry
130522581 CDS
T09160
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130522581 (focad)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130522581 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
130522581
NCBI-ProteinID:
XP_056883084
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All DBs
Position
3:8693769..8714991
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AA seq
1800 aa
AA seq
DB search
MTESLRLRFDFASPVIQLQTVKYLIAAVLKEKGPSGQITSSTLQGPALQSLWEQCCSDSA
VIHSACCDAVVLLVAQGHADLQFVLNNVLNLLPSARNVQGLMKIIGQLLQIETDQRDRSV
NFTCPYSIRKNPHPFITALESRVDCWPALTLEIDDFIQQAVDRRDPAYMDVLAPFLQYLY
CEPQRQTQHALLRHSLLKVLLPSPPRTGSALKDKDHEQNCSVSDGLLSRLCQMVPYMQVD
NMEAVLELCEFVAALLQTLLAFEERWRKERAELLLQMLCVSHRCLVINGDCRPLLSLMQQ
LLPHCRHDLPLDELMVGVALLLLEAPSGQQSRLLSLALSLVPEDAELSPWLSPILVLPLL
QLLSCSSLTEPLAEKRTHQLNLDLAHRLLRQISKGTDKRQSCPPPMRLLSSWYSELRVAL
STLRKVADNPGAAAEWLLSVSSALSSSQPRLCSLSLIVTHLILTGEEQICRLALKVVQAI
ATADPSQVPSLIPVLLYKLGRTNDPSVVHAVLYCLPGLGTHKLCISMVLQTLSMLASAPK
MSAVAMRLLTALWKIQDRIYPELQVLLGQDRKVVVGRDAQWEQTLARAVCIRDICRERPY
QHGGDMLAAITSMLNQCTSADMAVPAAVALHGLKELCSAEVVDILSTWKSLGLQLRTDSR
TPLVKATAEILALVPQLTVKTEEYEKLKEEVVSVLWTDALSKDPEVAACGYKALAAFPQE
LHTINHLPEAVRPLPNLSEHGEDEQEMEEPDLSIAGPTYMRLMEHTPPPVLPAFELFLTA
LVKEEMSQMPRGVHFMAMRGGSLASARGKTVAGIPAFMLKTYEKNKQPGLKSGLTAGLLL
CYELPLQTDREGRPINRLLVNRSHAYQQILANLIHDVNIQPSEWHRALLLPQAWSGFMSR
AFNAALQGRRADLELRHKQGKDDSEELHYKQHCAWLWARDQLADIIKSAIKDSPVVQGNS
ILALSGLAAAVAKYGSNLPANGEDSHGAAAEFVPTADWLAMVLNTLLSISSSNYKATGPV
FQWFLHRSYSGENTASVIARSCASLALSLLVPFLAAWRKDSLLEILPVLQAGLPGSPTAE
DSQAIQFHSGLALGMVVSGAHHQHLSGVSAHQDAALLLDSLDALEKCSFRADLEYRTGCL
LGLALVLVALCDMEQTDLHVRVTQTLDKLVSNLQDGGQGRMIQEVLAYSVACVTVSAFSR
GLLDASKAAEVMNTLRNLTEESQQTTGFSLALGMVVHGLSMCGHGKAEDIHPHLLASWMK
ILLAEGCPTMHRLAAVSGLVALVGSESCIIHLKSELEISSQQQSRLNEVIRAVTQVITLS
GAIGLQSNSACLLGHLYLAHMSNSYSHSSVPQDFSYLPEKSVIRSVATFLTEAGKKGPDF
VHPVLVKTAVTSLASVGAGFQFPPVNWSVSLSPLMRLGFGEDVQHQCLVLAASQAHSSQS
AALFLGSWVSPPLVHSLSHPTRAHLYESLGLWMKHVAEDKLQVYVDKLGLQHFQDKQNPH
SLSMCQSLLRGLAQAMALPNPPKHCWTVLSSTTEKIYSILPNQIQDNEVGLYVGLAKCLS
ELCDTEIDRITRVTEDRMEKAAFILAYLTSKARLPFLGLNDVISGIRCGWPGHRVGWILL
QAFYQCHRGTNPSTGVSQQMEWLLELMGHIRNIAYGGKAEPSGDTSAATDFLFHVFAAAV
VSWGDHVVPLLLGVRATWLPWQPESKPQILEHSLYGEESHVGNALPHCLLGMPLSLAQLL
SKEPWSSQRHKFIDWLLSITEGPEKSFSVAVTNAAKAALLALNSFPEFKKKLVWTRAYGW
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagtctgaggctaagatttgattttgccagccctgtcatacaactacagacg
gtgaaatatcttatagctgctgtgttaaaagagaagggacctagtggacaaatcacaagc
tctacactgcagggcccagcactgcagtccctgtgggaacagtgttgcagcgactctgct
gtgatccattctgcttgctgtgatgccgtggtgctgttggtggctcagggccatgcagac
ctgcagttcgtcctcaacaacgtcctcaacctcctcccctcggccagaaatgtgcagggg
ctgatgaagattattggacagctgttacagattgagacggaccaaagagacagaagcgta
aacttcacctgtccctactccatcaggaaaaatcctcatccgttcatcacagccctggag
agccgagtggactgctggcccgctttgacgctggagatcgatgatttcattcaacaggct
gttgacagacgtgacccggcctacatggacgtgctggccccgttcctccagtatctgtac
tgtgagccccagaggcagacccagcacgccctgctgcgacacagcctcctcaaggtgctg
ttgccatcgcctccacgtaccggatcggccctcaaggacaaagaccacgagcagaactgc
tcagtgtccgacggtcttctgagccgcctctgtcagatggttccttacatgcaggtggac
aacatggaggcggtgttggagctgtgtgagtttgtagctgctctgcttcagactcttctg
gcctttgaggagcgctggaggaaggagagagccgagctgctgctgcaaatgctgtgcgtc
tcccatcgctgcctggtcataaacggagattgtcgacctctcctcagcttaatgcagcag
ctcctgcctcactgccgccatgatttgccattggacgagttgatggtgggtgtggcctta
ctcctcctcgaggctccgtcgggtcagcagagccggctgctcagtctggcattgagttta
gtgcccgaagacgccgaactctcgccgtggctcagtcccatcctggttcttcctctgctg
cagctcctgtcctgctccagtctcacagagccgctggcagaaaaaaggacgcatcagctc
aacctggatctggcccacagactgctgcgccaaatcagtaaagggacggacaagcgacag
tcctgcccacccccgatgcgtcttctaagttcctggtacagtgagctccgcgtggctctt
tccacgctgcgtaaagtggcagataatccaggagcggcagccgaatggctgctgtctgtc
tcttcggctctgtccagcagccagccccgactctgctcgctcagcctcatcgtgactcat
ctcattctgacgggcgaagagcaaatctgccgactcgctctaaaagttgtccaggctata
gcgactgctgaccccagccaggtcccttccctgattcctgttctgttgtacaaactgggg
aggaccaatgatcccagtgtcgttcatgctgtgttgtactgcctgcctggccttgggacc
cacaagctctgcatctccatggtgctacagacgctctctatgctggccagtgcacccaag
atgtcagcggttgcgatgcgcctgctgactgctctctggaagatacaggatcgaatttac
cccgagctgcaggtcctgctgggacaggacagaaaggtggtagtggggagggacgcccag
tgggagcagacattggccagagctgtctgcatcagggacatctgcagagagagaccttat
caacatggaggtgacatgttagctgccatcacgtcaatgctgaaccagtgcaccagcgca
gacatggcagtgccagctgccgttgcactacacggattaaaggagctgtgcagcgcagag
gtagtggacattctgtcaacgtggaagagtctcgggctgcagctgcgcacagactcccgc
acacccctggtcaaagctaccgctgaaattctggcactggttcctcagctgactgtcaag
acggaggaatatgagaaattgaaagaggaggtggtcagcgttctctggactgacgctttg
agcaaggatccagaagttgctgcctgtggttacaaagctttagcagcatttccacaagag
ctccacaccataaatcaccttcctgaggccgtccgcccattgccaaatctttctgaacac
ggggaggacgaacaagagatggaagaacctgatctgtccattgcagggccaacttatatg
aggctgatggagcacacgccaccacctgttctaccagccttcgagcttttcctgacggcg
ctagtgaaggaggaaatgagccaaatgccccggggggttcacttcatggccatgaggggt
gggagccttgcttccgcccggggtaaaacagtggccgggatcccagcattcatgttgaaa
acatacgagaaaaataagcagccgggactgaagtccggactcacagctgggctgctgctt
tgttacgagctgcctttgcagacggaccgtgaaggcagacccatcaaccgcctccttgtg
aatcgcagccacgcctaccagcagatcttggcgaatctaattcacgatgtgaacattcag
ccgtcagagtggcaccgggctctccttctgccccaggcctggagcggtttcatgagccga
gctttcaacgctgccctacagggccggcgtgctgatttggagttgcggcacaaacaaggc
aaagacgactcggaggagctacattacaaacagcactgtgcatggctgtgggcccgagat
cagctggctgatatcatcaaatctgcaataaaggacagtcctgtcgtgcaaggaaattcc
atcctggctttgagcgggctagcagctgccgtcgccaaatatgggagcaacttgcctgct
aacggtgaagacagccatggggcggcagcagagtttgttcccacggccgactggctggct
atggtcctcaacaccctgctcagtatcagcagcagcaactacaaagctacaggaccggtg
ttccagtggttcttacatcgctcctactcaggtgagaacaccgccagcgtcatcgctcgc
tcctgcgccagtcttgcgctctcccttctggtgccttttttggcggcttggcgaaaggac
agcttgctagagatcctgccggtgctgcaagctggcctgccaggctcccccacagctgaa
gactcccaggccatccagttccattcaggcctggctctcggcatggtggtgagcggagcg
catcaccaacatctcagtggtgtttcagctcaccaggatgctgctctgctcctcgactct
ctggatgctctggagaaatgctccttcagagcagatctagaatacagaaccggatgtttg
ttgggcctggctctggtgctcgttgccctttgtgacatggaacaaacggatctacacgtc
cgcgttacccaaacactggataagcttgtgtccaacctgcaagatggtggacaaggacgc
atgattcaagaggttttggcttattctgtggcatgtgtgaccgtctcagcctttagcaga
ggacttctagatgctagcaaggctgcggaggtcatgaacactctacggaatctgactgaa
gagagccagcagactacaggcttctccttggctctagggatggtggttcatggcctgtca
atgtgtggacatggtaaagcagaggacatccatcctcacctgttggcttcttggatgaag
atcttactggctgagggatgtcccacaatgcaccgcctggctgccgtcagtggtctcgta
gctttggttggatcagagagttgcatcattcatctgaaaagtgagctggagatctcctcg
cagcagcagagtcggctgaatgaagttattcgggctgtcacacaggtcattactctctcg
ggtgccattggtctgcagtccaacagcgcttgcttgctgggtcatctgtatttggcccat
atgtccaacagttacagtcacagttcagttcctcaggacttcagttatctgcctgaaaaa
agtgtcatcagatcagtcgcgaccttcctcacagaggccgggaaaaaaggtccagacttt
gtccacccggtcctggttaaaaccgctgtgacctctcttgcgtcggtcggggctggtttc
cagttcccgcccgtcaactggagcgtttctctctctcctctgatgagactgggttttgga
gaggatgttcagcatcagtgtttggtgctggcagcatctcaagctcactcctctcagagt
gctgctctcttcctgggctcctgggtgtcaccaccactcgttcacagcctaagtcacccc
actcgagcgcacctgtatgagagtttaggcttgtggatgaaacatgttgctgaagacaaa
ctccaggtttatgtggacaagctgggcctgcagcatttccaggacaagcagaatccgcac
agtctgtccatgtgccagtcgctgctgcggggccttgctcaggccatggcgctcccaaat
ccccccaaacactgctggacagttctcagttccaccactgagaagatctactccatcctc
cccaatcaaatccaggataatgaagtcggcttgtatgtgggactggccaaatgtctttcg
gagttgtgcgacacagagattgaccgaatcactcgggtcacagaggatcggatggagaaa
gccgccttcatcttagcatatttgacctccaaagccagacttcctttcctgggactgaat
gatgtcatctcgggcattcgctgtggttggccgggccacagggtgggctggattctcctg
caggctttttaccagtgtcatcggggtaccaaccccagtacaggggtttcgcagcaaatg
gaatggctgttggagctgatgggacacattcgaaacatcgcctatggtgggaaggcagag
ccgtctggagacaccagtgcggccacagacttcctgtttcacgtctttgccgccgctgtc
gtttcctggggcgatcacgtggtgcccctcctccttggcgttagagcgacgtggttgccg
tggcaacccgagtccaagccccaaattctagagcacagcctgtatggcgaagaatctcac
gtcggcaacgcccttcctcattgcctgttgggaatgccgctcagtctggctcagctcctg
agcaaagagccctggagcagccaaaggcacaagttcatagactggctcctgagcatcaca
gaaggccccgaaaagagtttttcagtggctgtcaccaatgcggcaaaagctgctctcttg
gctcttaactccttccccgaattcaagaagaagctggtgtggacgagagcctacgggtgg
tag
DBGET
integrated database retrieval system
