Takifugu flavidus (sansaifugu): 130522596
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Entry
130522596 CDS
T09160
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130522596 (sox19a)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130522596 (sox19a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130522596
NCBI-ProteinID:
XP_056883115
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All DBs
Position
3:complement(8876188..8879247)
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AA seq
300 aa
AA seq
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MYSMMEHEMKPSGQPPPQTPHRMSPVVTGSVDNGGGSLPSPKGAYAQGDPMDKVKRPMNA
FMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLNDAEKRPFIDEAKRLRAVHMKEYPD
YKYKPRRKTKPLLKKDPQVAKYPLSTGNLLAVAQGQSGSPRMESYGWSPSGGYPGMQGDT
LGYSQQLHRYDLSPLQYPSKMSAAQPYMNGANSYSPMSYGSSPQQPPPVTMSMVKAEPVS
QSPPTGTLNHHRGPLQGDLRDMISMYIPGPGGEAADPAAAQRGYTSVQQHYLGTVPLTHM
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagatgaagccgagcggccagccccctcctcagacccct
caccgaatgtccccggtggtgaccgggagcgtggataacggcggcggctctctgccgagc
cccaaaggcgcgtacgcgcagggcgaccccatggataaagtcaagcgacccatgaacgcg
ttcatggtgtggtccaggggccagcggcgtaagatggcccaggagaaccccaaaatgcac
aactcggagatcagcaagcgcctgggagccgagtggaaactactgaacgacgcggagaag
cggcccttcatcgacgaggcaaagcgcctccgggcggtgcacatgaaggagtaccccgac
tacaaatacaagccccgccgcaagaccaagcccctgctcaaaaaggacccccaggtggcc
aaataccccctgtccaccgggaacttgctggcggtagcgcagggccagagcgggagcccg
aggatggagagttacggctggagccccagcggggggtatcccggcatgcaaggcgacaca
ctggggtacagccagcagctgcaccggtacgacctgtcacccctccagtacccgagcaag
atgagtgcagctcagccctacatgaacggagccaactcctacagccccatgtcgtacggc
agcagccctcagcagcccccccctgtcaccatgtccatggtgaaagcggaaccagtatcc
cagtctccccccacaggcaccctgaaccaccaccgtgggcctctgcagggtgacctcagg
gacatgatcagcatgtacatcccaggacctggaggggaggccgccgaccccgcggcggcc
cagaggggctacaccagcgtccagcagcactacctgggcaccgtccctctcactcacatg
tag
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