Takifugu flavidus (sansaifugu): 130522680
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Entry
130522680 CDS
T09160
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130522680 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130522680 (u2af1)
Spliceosome [BR:
tfs03041
]
Complex A
U2 snRNP components
U2 related factors
130522680 (u2af1)
Complex B
130522680 (u2af1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130522680
NCBI-ProteinID:
XP_056883291
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All DBs
Position
1:complement(11894470..11897560)
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AA seq
231 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRKKGRHRSRSRERRSRSRDRDRGRGGRDRERRRSRDRPRSGRF
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacttagcctcaatttttgggacagagaaagataaagtcaactgctcattt
tattttaaaattggtgcctgtcgacatggcgaccgctgttccaggttacacaataagcca
acattcagccagacaattgctctcctgaacatttaccggaacccccaaaacagcgcgcag
tctgctgatggtctgacctgtgctgtcagtgatatgcagatgcaggagcattttgatgag
ttctttgaggaagtgttctctgaaatggaagaaaagtatggagaagtggaggaaatgaac
atatgtgacaaccttggtgaccatttggtgggaaatgtgtatgtgaagttccgtaacgaa
gaagatgcggagaaggctgtgattgatctgaacaatagatggtttaatggacaacccatc
catgccgagctctctccggtcacagacttcagagaagcctgctgtcggcagtatgagatg
ggagagtgcacccgtggagggttctgtaacttcatgcacctgaagccaatctctcgagaa
ctgaggagagagctctatggccgcaggaagaaaggccgtcacaggtctcgctccagggaa
agacgatctcgctcgagagaccgagacagaggcagagggggccgtgaccgcgagaggcgc
cgctccagagacagaccacgttcagggcgattctga
DBGET
integrated database retrieval system
