Takifugu flavidus (sansaifugu): 130522705
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Entry
130522705 CDS
T09160
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs02010
ABC transporters
tfs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130522705
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130522705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfs02000
]
130522705
Transporters [BR:
tfs02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130522705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
130522705
NCBI-ProteinID:
XP_056883328
LinkDB
All DBs
Position
3:complement(1929921..1994714)
Genome browser
AA seq
1966 aa
AA seq
DB search
MVGLARDFLPLFEQAVRLQNSVAFGAARELDFGKDPVGSLGQLICDRDLSGSNNRSASVR
SGGLMGITGMAAGNSSDAFCQVLVATMENTPGLRYIWSAFKPLLQGKVLYTPDTPAARRL
IKEANATFDALGRLRELVDLWDELGPRVWDFFQDSPRVNALRMLLKNPLFAALVDQRLNG
TGWTAELLANFLYNGPPEERPSGMPPYDWRNVYNATTEVLTLLSNFLGCLDLNKFVAVPT
EGLLVAKAQELLENHTYWAGIVFENLGPDASEAPPHVKYKIRMDIDEVEGTKKLKDRLWV
PGAGDSAFNDLRYMLGGFAYLQDMMDHGIIKAQTSEAPPLGVYAQQMPYPCYVDDGFIQG
ISGMLPMMLVLAFMYTVCMSIKSLVLEKELRLKEVLRAVGIQNAALWAASFTENLVLLTV
PCALISVMVKYGGVLQYSDPSLIFVFLLVFCLTTITQCFLISVFFSKANLAAACGGLIYF
ALYLPYVLCYAWSDVMGFPAKVAVSVLSCVAFGYGCENFAKYEQQGVGIQWSNMSQSPEG
GESYTFTLSIIMMLFDAALYWTLTWYIENVFPGQYGIPKPWYFPFTASYWCGTTPAMDDD
PDLLKDAVAQSEYLEKPPPDVKAGVSIRNLVKIYKNGKKLAVDGLSVDFYQNHITSFLGH
NGAGKTTTMSILTGLFPPTSGTALISGYDIRTDMDGVRRYLGMCPQHNVLFNELTVEEHV
YFYARLKGCSRQQVALEMDQMIADVGLPHKRKELAKNLSGGMQRKLSVAIAFVGGSKIVI
LDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMDEADILGDRIAIISHGKLRCCGSS
LFLKKYFGRGYYLTLVRDGAAKMAAQRGGIIQDQAQEQRRSCSPDEGIGSRSWSPPDPTG
LTAVGQLVRRRVPEAVFLESVGQEITFVLPYSGARDGTFAQLFQDLDRAMSDLGLTSYGI
SDTTLEEIFLKVAEDTGVDASNHEAAELSTRHRRRSSRASERSGTARPERLSGIKGNGEK
LSNKVEDLNRKAAVSGKGSRVITGLDLIRRQFLALFIKRFHYARRSRKGLVAQVVLPAVF
VCLALVFSLIVPPFSEFPSLELQPWMYDLPQTTFYSNDGADGVDVSRVVDTLVNSPGFGT
RCMMGDPIPNFPCSSRGSEWATPPVDPSIADIFLNGNWSMSNPSPSCQCSTPERSLMLPD
CPPGAGGLPPPQRIQNTTDTLLDLTGRNVTDFLVKTYKDSGRTRYGGISVGGVNSQVLLT
EEEIKAVIGDLRNLLGSFLGNGTDRIFQSAETLLKRMGTRNNVKVWFYNQAWHSVVSFLS
VANNAILRGNLSTPEEARRYGISVSNHPLNLTKEQLSNAAMAASSTDVVVSICVIFAMSF
IPASFVLFLIQERVSKAKHLQFVSGVNPTVYWLANFTWDMCNYIIPCFIVIVIFLCFQQK
AYVSPPNLPALILLLLLYGWSITPLMYPASFVFSVPSTAYVVLTCINLFIGINGSVATFV
MELFDDENVAYTNDIVKQVLLIFPHFCLGRGLIDMAKNQAMATLFIGFGEDRFQDPLGWD
MVGKNLCAMAIQGAVMFAATILIQYRFFCKPRLVSVAPLPAEDEDVDVARERRRVHEGWA
QDDLLRVCDLTKVYPRKSTPAVDRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSS
GEAFLSGYSIRTQMRDVHQNLGYCPQFDAIDELLTGQEHLEFYARLRGVPENEVTMVAEW
GIQKLGLVKYANKSAGTYSGGNKRKLSTAMALIGSPPVIFLDEPTTGMDPKARRFLWDCI
LSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGG
APALLKPVEDFVQEEFPGSVLKEKHHNTLQYQLPYTRGALAHIFSQFQKNQHRLAIEDYS
VSETTLDQVFVNFAREQQAEDDSGAYDNPVDTTDELPLRPLQGKEV
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcctcgcccgcgacttcctgccgctgtttgagcaggcggtccggctgcagaac
tccgtggccttcggtgcggcccgtgagctggactttggaaaagaccccgttggcagcctg
ggtcagctgatctgcgaccgggatctgtccggctccaacaacaggtccgccagcgtccgg
tccggagggctgatggggatcacggggatggctgcgggcaacagttcagacgctttctgc
caggtcctcgtcgccaccatggagaacacgcccgggctgcgctacatctggagcgccttc
aagccgctactgcagggaaaagtcctctacacgcccgacacgcccgccgctcgccgcctg
atcaaagaggccaacgccaccttcgacgctctgggtcgcctccgggagctggtggacctg
tgggacgagctcgggccacgcgtctgggacttcttccaggacagccctcgagtcaacgcg
ctccggatgttgctgaagaacccgctgttcgccgccctcgtggaccagaggctgaacggg
acgggctggaccgccgagctgctggccaacttcctgtacaacgggcctccggaagagcgt
ccgtccgggatgcctccgtacgactggaggaatgtttacaacgccaccaccgaagtgctg
acgctgctgtccaacttcctggggtgtttggacctgaataagttcgtggcggtccccacg
gaaggcctcctggtcgccaaagcccaggagctcctggagaaccacacctactgggccgga
atcgtctttgaaaacctcggccccgatgccagcgaagccccgcctcacgtcaagtacaag
atccgcatggacatcgacgaggtggagggcacgaagaagctgaaggacaggctgtgggtt
cccggcgccggcgacagcgcgttcaacgacctgcgctacatgttgggaggcttcgcctac
ctgcaggacatgatggaccacggcatcatcaaagcccagacctcggaggccccgcccctc
ggcgtgtacgcgcagcagatgccgtacccttgctacgtggacgacggcttcatccagggg
atttcgggaatgctccccatgatgctggtgctggccttcatgtacaccgtgtgcatgagc
atcaaaagcctggtgctggagaaggagctgcggctcaaggaggtgctgcgcgccgtgggc
atccagaacgccgccctctgggccgccagcttcacggagaacctggtcctgctcacggtc
ccctgcgcactcataagtgtcatggtcaagtacgggggcgtcctccagtacagcgaccct
tcgctcatcttcgtcttcctgctggtcttctgcctgaccaccatcactcagtgcttcctc
attagcgtcttcttctccaaagccaacttggcggcagcgtgcggcggcctcatctacttt
gccctctacttgccgtacgtcctttgttacgcctggagcgacgtcatgggtttccccgcc
aaggttgccgtgagcgtcctctcgtgcgtggccttcggctacggctgcgagaactttgcc
aaatacgagcagcaaggcgtcgggattcagtggtccaacatgagccagagtccggaggga
ggcgagtcctacaccttcaccctgtccatcatcatgatgctcttcgacgccgcgctgtac
tggaccctcacctggtacatcgagaacgtcttcccaggccagtacgggatccccaagccc
tggtacttccctttcaccgcctcctactggtgcgggacgacaccggcgatggacgatgac
cccgacctgctgaaggacgccgtcgcacagagcgaatacctggagaaaccgccgcccgac
gtgaaggccggcgtctccatccgcaacctggtgaagatctacaagaacggaaagaagctg
gccgtggacgggctgagcgtggacttctaccagaaccacatcacgtctttcctcggccac
aacggagccgggaaaaccaccacgatgtccattctgacgggactcttcccgcccacgtct
ggaaccgctctcatcagcggatacgacatccgcacggacatggacggcgtccggaggtac
ctggggatgtgcccgcagcacaacgtcctgttcaacgagctgacggtggaggagcacgtc
tacttctacgccaggctgaagggctgcagccgccagcaggtggcgctggagatggaccag
atgatcgcggacgtcggcctgccccacaagcggaaagaactggccaagaacctgtcaggt
gggatgcagaggaagctctccgtggccatcgccttcgtgggcggctccaaaatcgtcatc
ctggacgagcccacggcgggggtggacccgtacgcccgccgggggatctgggagctgctg
ctgaagtacaaacaaggccgcaccatcatcctgtccacgcaccacatggatgaggcggac
atcttgggcgaccgcatcgccatcatctcccacggcaagctgcgctgctgcggctcctcg
ctcttcctcaagaagtattttggcaggggctactacctcaccctggtcagggacggcgcg
gcgaagatggcggcccagaggggcggcatcatccaggatcaggcccaggagcagaggagg
agctgcagccctgacgagggcatcggcagccggagctggagcccccccgaccccacaggt
ctgacggcggtgggtcagctggtgcggcgccgcgtccccgaggcggtcttcttggagagc
gtcgggcaggagatcaccttcgtcctgccttacagcggggccagagatggaacctttgct
cagctcttccaggatctggaccgggccatgtctgacctcggcctcaccagctacggcatc
tccgacaccacgctggaggagattttcctgaaagtggctgaagacactggagtggacgct
agcaaccacgaagcggcggagctgtcgaccagacaccgcagacgaagctcccgcgcatcg
gagcggagcggcaccgcccgacccgagcggctgtctggcatcaaaggaaacggggagaag
ctctccaacaaggtcgaagacctgaatcggaaggccgccgtcagcgggaagggatccagg
gtcatcaccggattggacctgatcaggaggcagttcctggcactctttatcaagcgcttc
cactacgcccgaaggagccgcaagggactcgttgcccaggtggtcttacctgccgtcttt
gtgtgcctcgctctcgtcttctccctcatcgtcccaccgttctcggagttccccagcctg
gagctgcagccctggatgtacgacctgcctcagaccaccttctacagcaatgacggagca
gacggcgtggacgtgtcccgggtggtggacaccttggtcaactcgccggggttcgggacc
cgctgcatgatgggagatccgataccgaattttccctgttcctctcggggttctgaatgg
gcgacgccgccggtcgatccgtcgatcgccgacatcttcctcaacgggaactggagcatg
tctaacccctccccttcctgccagtgcagcacgcccgagcgctccctcatgctgcccgac
tgtccacccggagcaggaggcctcccgccgcctcagcgcatccagaacaccacggacacc
ttgctggatctaaccgggcgcaacgtgacagatttcctggtcaagacctacaaggactcg
ggtagaaccaggtatggagggatctccgtgggcggggtcaattcccaggtcctcctgacg
gaggaggagatcaaggctgtgatcggagacctgagaaacctgctgggttcgtttctgggt
aacgggaccgatcggatcttccagagcgccgagacgctgctgaagaggatgggaacccgg
aacaatgtgaaggtgtggttctacaaccaggcctggcacagcgtggtgtccttcctcagc
gtggccaacaacgccattctgaggggaaacctgtcgaccccggaggaagcccggcgctat
ggcatctccgtgtccaaccacccgctaaacctcaccaaagagcagctctccaacgccgcc
atggccgccagctccaccgacgtggtggtgtccatctgcgtcatcttcgccatgtccttc
atccctgccagctttgtcctcttcctcatccaggagcgggtgagcaaagccaagcacctg
cagtttgtcagcggcgtcaacccgaccgtctactggttggccaacttcacctgggacatg
tgtaactacatcattccgtgcttcatcgtcatcgtcatcttcctctgcttccaacaaaaa
gcctacgtttcacctcccaacctgcccgctctgattctccttctcctcctgtatgggtgg
tccatcactcctttgatgtacccggcgtccttcgtcttcagcgtgcccagcacggcctac
gtggtcctgacctgcatcaacctcttcatcggcatcaacggcagcgtggccaccttcgtc
atggagctctttgatgacgagaacgtcgcctacaccaacgacatcgtcaagcaggtgttg
ctgatcttcccgcacttctgtctgggccgagggctgatcgacatggccaagaaccaggcc
atggccacgctcttcatcggcttcggtgaagatcgattccaggaccccctcggctgggac
atggtggggaagaacctctgcgccatggcgatccagggcgccgtcatgttcgccgccacc
atcctgatccagtaccggttcttctgtaaacccaggctcgtttccgtggcgccgttaccg
gcggaggacgaggacgtggacgttgcccgggaacggcggcgagtgcacgagggctgggcc
caggacgaccttctgagggtctgtgacctcactaaggtgtatcctcggaagagcaccccc
gccgtggacaggctgtgtgtgggcgttcccgctgcggagtgtttcgggctgttggggatc
aacggcgccggtaaaaccaccaccttcaagatgctgaccggcgacatccccgtctccagc
ggggaagccttcctgagtggatacagcatccggacacaaatgcgggacgtgcaccagaac
ctggggtactgcccccagtttgatgccatcgatgagctgctaaccggacaagaacatctg
gaattttacgcccgcttgcggggggttccggagaacgaggtcaccatggtggccgagtgg
ggcatccagaagctggggctggtcaaatacgccaacaagtcggccgggacctacagcggc
gggaacaaacgcaaactgtccacggcgatggccttgatcggatcgcctccggtgattttc
ctggatgagccgaccacggggatggaccccaaagcccgtcgtttcctgtgggactgcatc
ctgagcatcatcaaagaggggcgctcggtagttctgacgtctcacagcatggaggagtgc
gaggccttgtgtacccgcatggccatcatggtcaacgggcgcttcaagtgcctcgggagc
atccagcatctgaagagcaggtttggcgacggctacaccgtcatcgtgcgggtcggcggc
gctccggcgttgctgaagccggtggaagacttcgtccaggaggagttccctggaagcgtc
ctgaaggagaagcatcacaacacgctgcagtaccagctcccgtacacacggggagctctg
gcacacatcttcagccagttccagaagaaccagcaccggctggccatcgaggactactcg
gtgtccgagaccaccctggaccaggtctttgtgaattttgcgagggagcagcaggcggag
gacgactctggagcctacgacaaccccgtggacaccacagacgagctgcccctgcggccc
ctgcaggggaaagaggtgtaa
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