Takifugu flavidus (sansaifugu): 130522877
Help
Entry
130522877 CDS
T09160
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130522877 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130522877 (slx1b)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130522877 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
130522877
NCBI-ProteinID:
XP_056883658
LinkDB
All DBs
Position
3:8368802..8371093
Genome browser
AA seq
285 aa
AA seq
DB search
MTFLFSVFWLNTKTVCFLIIMVVVVESFFGVYMLYCTNPKYKGRIYIGFTVNPERRIKQH
NAGRHKGGAKRTSGRGPWEMLLIIHGFPSDIAALRFEWAWQHPHSSRHLSHVCKRSRKES
SLQFHWRVVSNMLLVAPWNRQPLTTRWLKQEFMMDFEPNLQPPMHIPIALGSVTAKKSQQ
VDLSSEQGELLKCFLCKGLIKGPEKLSCFHPSCNMCSHVICLARRFLKSEPSHLLPVEGE
CPSCYKALLWGTLIRRKNGCFGDLEATMPSSYSTGRMNFRYEPSA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttttatttagtgttttttggctcaatacgaaaacggtttgttttctaataatt
atggtcgtcgtagttgaaagtttcttcggggtgtacatgctgtactgcaccaatccaaaa
tataaaggccgtatttacatcggctttactgtgaacccagagcgcaggatcaagcagcac
aacgctggacgacacaaggggggagccaaaaggacaagtggaaggggaccatgggagatg
ctccttattatccatggctttccatcagatattgcggccctaaggtttgaatgggcatgg
cagcacccccactcctcaaggcacctctcccatgtctgtaagcgctccaggaaggagtcg
agcctacagttccactggcgcgttgtctctaatatgctactggtggctccgtggaacagg
cagccactaacaacccgttggttgaaacaggagttcatgatggactttgagcccaacctg
cagcctccaatgcacattccaattgctttagggagtgtgacagcaaaaaagtcacagcaa
gtggatttgtcgtcggagcagggggaactactcaagtgcttcctttgtaaaggtttgatt
aaggggccagagaagctcagctgtttccacccatcctgtaacatgtgcagtcatgtgatc
tgccttgccagacgtttcctgaagtcggagccgtcccacctcttgccagtggagggtgaa
tgcccatcatgttataaagctttgctctgggggactcttatccgccgtaaaaatggctgc
tttggagacctggaggcgaccatgccatcatcatacagtactggacggatgaacttcaga
tatgagccgtcagcctga
DBGET
integrated database retrieval system
