Takifugu flavidus (sansaifugu): 130522899
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Entry
130522899 CDS
T09160
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03420
Nucleotide excision repair
tfs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130522899 (ercc1)
03460 Fanconi anemia pathway
130522899 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130522899 (ercc1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130522899 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
130522899
NCBI-ProteinID:
XP_056883754
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All DBs
Position
1:8038388..8041949
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AA seq
348 aa
AA seq
DB search
MKKRFNINLDDSTFTKERPQPQYESLFKKGQTSATSPAERCSEHLSYAQFIVQSKSNAAA
APPREAPSKVARAEDAEETNVIQKESASVSCVPGGPQRVQDPAKFTEDGFNRLQTIEATQ
NSTQHIEGTGSISDPNLPQGPKPVGSGSSIVVSPRQRGNPILKYIRSVPWEFGDVVPDYV
LGQTTCALFLSLRYHNLNPNYIHDRLKLLGQTFTLRVLLVQVDVKDPHHALRELARICVM
ADCTLVLAWSPEEAGRYLETYKSYEKKPADTLKEQVEKDYLSKVTECLTTVKSINKTDAI
TLLSTFSSVEGIMNASKDDLVLCPGLGPQKARRLYDVFHKPFLKSKNT
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaggtttaatatcaacctggatgactccactttcacaaaggaaagaccacag
ccgcagtatgagtccttgttcaaaaaaggacaaacctcggcaacatctcctgcagaacgg
tgctctgagcacctgtcctatgcacaattcatcgtccagagtaagagcaatgcagccgct
gcccccccgagggaagctccttccaaagtggccagagctgaagatgctgaagagactaac
gtgatccagaaagagtcagcttcggtgtcatgcgtcccaggaggaccccagagagttcag
gaccctgctaagtttactgaagatggatttaataggttgcagacaattgaggccactcag
aattccacccagcacatcgaaggaactggttcaatttcagatccgaatcttccgcaggga
ccaaaaccggtggggtctgggagcagcattgttgttagcccacgccagagggggaatccc
attctgaagtacataaggagtgtcccgtgggaatttggagatgttgttccagactatgtt
ttaggtcagaccacttgtgctctcttcctcagcctaaggtatcacaatctcaatccaaat
tatatccacgatcgtctgaagcttctcggacagactttcaccctgcgagtgttactagta
caagtagatgtgaaagaccctcatcatgctttgagagagctggctcgaatttgtgtcatg
gctgactgcactctcgtcttggcttggagtccagaggaggcagggcggtacctggaaaca
tacaaatcatatgagaagaaacctgcagacacattaaaggagcaagttgaaaaggactat
ctatcaaaggttactgagtgcctgaccacagtcaagtccataaacaagaccgacgccatt
acgttactctccactttttcctctgtagaaggaatcatgaatgcttctaaggatgatttg
gttctctgtccaggacttgggccacaaaaagcgaggcgtctctacgatgtttttcataaa
cccttcctcaagtccaaaaatacctga
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