Takifugu flavidus (sansaifugu): 130523192
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Entry
130523192 CDS
T09160
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130523192
Membrane trafficking [BR:
tfs04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130523192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_7
SH3_1
TPR_8
TPR_10
SH3_9
ARM_TT21_4th
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
130523192
NCBI-ProteinID:
XP_056884207
LinkDB
All DBs
Position
3:8793536..8801010
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AA seq
1298 aa
AA seq
DB search
MSARCEQDGGGAVSRRPSSTEPQPRHRTARGFSREMSMKSMLSTSEENFPTVLPVLLELV
RGPERLPADEELQEMLRGKLRILQADSDEVKAVFMELSAHLISISSEENAVFVTFRTFEE
LWKFSTYYTAGFLSHCLENLLLDQKFWLMSLEEDVAIEVRVQDETLNLIYRGILMQEGSL
FARCSTNQMFDSCTSGGDLYLEQGDIAQFEPPFLGSGWTVLCLADGARGTAPRPALEPLI
PFHQWFLKSAAESILVGDGKAHCDFPLPFASGTCLATKEYDAEGPVELSLAPGDRIIIVG
HLVSCFDWFTGRKESTGDVGLVKTSLVGPSRDVYSSTDICLEEEERTFFHLQEDTIIEET
VVSLKQKSSHDFGHSYKLDTIPLADFKGSTGGSSSSRVGGPQPDPSRGAQRTLGQNTVVA
VNRTPEIPPEEPKTPDLPCFRVHPVVEGNITENFTTLFSFLEGANYRSELGVLYRLSSGL
LASSVFTGHADEDELISFLSVARETARKKRLFWSQTRLCFLLGKLCAGRLKFSQARVYLE
ETLSVPRESFVDLKLLASIFSNLVGIYLLQKNTESLFATAERLTGLLFGISDCLESLEDD
IALKYILKKAILSRNKMAEARACHLLTRFHWSRAEGDQVVPYLERLLVLCAEDELAPILS
TSHGYLTLGRLYGELQLLQLSVSSAWKASQQSSVTLRDCLSCMTLVLDNVTRLRSEREDA
IPAQLAPYLHRALSFSRDHPGQHQVLSYHLTMCLCRLFCKYGMVEQAICQMHHLINSSDL
SQHLSVSDADRNSALIWLAWLHLDRHQPEAALDILDAVLATMPEHCTTPQEGVVLNMRGV
ALGCMGDLRKAAESYQAAAEICEEYEDMPNWAVAQANRGLLCVKAGANGLAQRYLTDAVK
LFSELDEIGHEENFITVLLQLGQNYVRQQQLDTGKGCYEWALLLSISAGLLECQLIATRH
LCQLYELECPDQAQCIKYNQHQIRLLGTMRAQRQEAEALESLSQRFLSLGAERAYRAALD
YTKSSLGIFIDLGCKEKEASGWLQAGRIYHLLGQTELVDLYVQAAQDVALSTGDTKFILK
ILEAAGDIFFNSCQDRHKAIPFYRDRALPISGRSSSVGTRLRLCNKLTELMLRLKLYEEA
VEFAQTALDISVSLGEHLSERVAYHRLAVLYHCLDQYELAEHYYLKTLSLCPTPLLFEEE
TLYYVQVYQTLGDITFYDLKDPYDAAGYYHLALAAAMDLGNKRSQLQLCTRLATIYHNFL
VDRELSLFFYQKARRFAAELNVRRVNISADQYYSRKGY
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaggtgtgagcaggatggcgggggagctgtgagccggaggccgagctccacg
gagccgcagccgcgacacagaacagcacgaggcttttccagagaaatgagtatgaaatcc
atgctgtccacaagtgaggagaacttccccacagtcctcccagtgctgctggagctggtc
aggggtccagagcgtcttcctgcagatgaggagttgcaggaaatgctgagaggaaaactg
cggatcctgcaggcagacagtgatgaggtcaaagctgtgttcatggagttgtctgctcac
ctcatctccatcagcagcgaagagaacgccgtgtttgtcacgttcagaacttttgaggaa
ctctggaagttctccacgtattacacagcaggcttcctaagtcattgcctggagaatctg
ctgctggaccagaagttctggctcatgtctttggaggaagacgtggccatagaggtcaga
gttcaggatgagacccttaacctcatctatagaggcatcctgatgcaggaaggctccttg
tttgctcgttgcagcaccaaccagatgtttgacagttgcacctctggaggagacctctac
ctggaacagggcgacatagcccagtttgagcctccgttcctgggctcagggtggactgtc
ctctgcctggccgatggggctcggggcaccgcgcccagacctgctctggagccgctcatc
cctttccatcaatggttcctcaagtctgctgcagagagcattttagtgggggatggaaaa
gctcactgtgacttccctctgccatttgccagtggaacctgtttggccactaaagagtac
gatgccgagggtccagttgagctgagcctggcgcccggtgatcgcatcatcatcgtggga
catctggtgtcctgttttgattggttcactgggaggaaggagtcaacaggggatgtcggt
ctggtcaaaacaagtctggttggaccttctcgtgacgtttacagctccacagatatatgt
ttagaagaagaagagaggaccttcttccatctacaagaagacaccatcatagaggaaacg
gtagtttcactgaagcagaaatcttcacacgattttggccacagctacaaactggatacg
atccccctggcagactttaaagggagcacaggggggagctcctcaagccgagtgggtggt
cctcagcctgacccgagcagaggggcccagaggactttgggtcagaacactgttgtggct
gtaaacagaacaccggagatccctcctgaagagcccaaaacgcccgaccttccatgtttc
agggtccatcctgttgtggagggaaacataactgagaacttcaccaccctcttctctttc
ctagaaggggctaactacagatcagagttgggtgtgttgtacaggctgagctctgggctc
ttggcgtcctctgtatttacaggccacgccgatgaagatgagctgattagtttcctaagt
gttgctagagaaacggccaggaagaagcggctattctggtctcagacacggttgtgcttc
ctgctgggtaaactctgtgctgggaggctaaaattcagccaggcccgcgtttacttggaa
gaaaccctcagcgttccacgagagagcttcgtcgacctcaagctgctggccagcatattc
tccaacctggttggcatttatcttctccagaagaacaccgaaagcctgttcgctaccgct
gagaggctcactgggttgctgtttggaatttctgactgcctggagagcctagaggacgac
attgctcttaaatacattctgaagaaagctatcctcagtcgcaacaaaatggcggaggcc
cgggcttgtcacctgctgaccaggttccactggagtcgtgctgagggggatcaggtggtt
ccttatctggaacggctgcttgttctttgtgctgaagatgaattggctccgatcctctcg
accagccatggatacctgaccctgggaaggctctatggggagctccagcttctgcagctc
agtgtcagttcagcctggaaggcctcccagcagagctctgtgacgctgagggactgcctg
agctgtatgactctggttttagacaacgtcaccaggctgaggtcagaacgggaggatgcc
atcccagcccagctggctccatacctacaccgagccctctccttcagcagagaccacccg
ggccagcatcaggttctgagctaccacctgaccatgtgcctctgtcgtctcttttgcaag
tacgggatggttgaacaggccatctgccagatgcatcatctcatcaacagcagtgacctg
tcccagcatctgtccgtgtcggatgcggacagaaactctgctctcatctggctggcgtgg
ctccatctggaccgccaccagccggaagctgcgctggacatcctggacgcggtcttagct
accatgccagaacattgtaccacaccccaggaaggtgtggtcctcaacatgcgtggtgtg
gcccttggctgcatgggagatctgcggaaggcggccgagagttaccaggctgctgctgag
atctgtgaggagtacgaggacatgcccaactgggctgttgctcaggctaaccgagggctg
ttgtgtgtgaaagctggagcaaacgggctggcccagaggtacctgacggatgccgtgaag
ctcttctccgagctggatgaaatcggacacgaggagaacttcatcacggtgctgctccag
ctcgggcagaattatgtccggcagcaacagctggacactgggaaagggtgctacgaatgg
gctctgctgctgtccatcagcgccggcctcttagagtgtcagctgatagcaacccgacat
ctttgtcagctgtatgagctggagtgtcccgaccaagctcagtgtatcaaatacaaccag
catcagatcaggctgttgggaacaatgagagcacagagacaagaggcagaagctctggag
tccctgagtcagcgtttcctctctctaggcgcagaaagggcgtaccgggctgctctggac
tacactaagagcagtctgggtattttcatcgacctgggctgtaaagagaaggaagcctct
ggctggctgcaggctgggaggatctaccacttactggggcagaccgaactggtggaccta
tatgttcaggcagcccaggatgttgctctgagtaccggagacaccaagttcatcttgaag
atcctggaagctgcaggagacattttcttcaacagctgccaagaccgtcacaaagccatc
ccgttctacagggaccgggccctgcccatctcagggaggagcagcagcgttggcaccagg
ctgaggttgtgtaacaaactgacagaactgatgctcaggctgaagttgtacgaggaagcc
gtggagtttgctcagactgcgctggacatcagtgtctctctgggagaacatctgagtgag
cgagtggcttaccaccgtctggctgttctttaccactgtctggaccaatatgaactggca
gaacattactacctgaaaactctgtccctgtgtcccacccccctgctgttcgaggaggag
acgctctactatgtgcaggtgtaccagactctgggggacatcacattttatgacctgaag
gacccgtacgacgcagcaggttattaccacctggctctggccgccgccatggatctgggc
aacaagagatcccagctgcagctctgcacccggcttgcaaccatctaccacaacttcctg
gtggaccgagagctctcgctcttcttctatcagaaggcgcggaggtttgcagcagagctg
aacgtgaggagggtcaacatctcagcagatcagtactacagccgcaaaggttactga
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