Takifugu flavidus (sansaifugu): 130523218
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Entry
130523218 CDS
T09160
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130523218 (arhgef40)
Membrane trafficking [BR:
tfs04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130523218 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
KANSL3_1st
IQ_SEC7_PH
RecC_4th
DHC_N2
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
130523218
NCBI-ProteinID:
XP_056884255
LinkDB
All DBs
Position
3:6101556..6127799
Genome browser
AA seq
1747 aa
AA seq
DB search
MGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLA
LKCLAPGGRTVQEILVPESQHPLVFTTEWLHSVNKERGHRREVGGGLDTCLVSTCDGVLR
LPWKEVVYPKFIHDPSEELGLMSCHDDSVPNRMSSEGGSTVGGWGCSSSGELDSWSWDED
EDEGLPPDGLDSAPALPSRRRSEDGLGRTVRNSQLDGDYVELLEPRVGPDGGVDTQQRYL
EMHGICKTKTLPLCRRGKTIKLRKGRGWGQSRLEGSGSFRAVVGARRDTGTSKDEILRVQ
RAPEPDEPVRGRQSCSSSVQNSFEEDTSRKHSEGLENPQIYFDGPVKERRPGVGKERDSN
GLTKCRDNHKCNVSEGRDSLVKNDAHDSTNHRACHASEGHSDQGSHSDSVFDDTDKPLSG
DSDATTPTSDTVERPFAVVSESGMIANSGSKTKSLSHPNVTKERDQGKMENRLCPRGKEV
KMAGFRAPRRKRKGKGARGRARSGGRAHQKGSKQQYKAPQPSPTTSCDLTKLPITGNDQS
EQRGNADKPDGLLPSTDEAEDARAPSAEAESLPVCNGQSGTTLFNHTDEEAKSGETSASQ
TNSIVSKEPPLLRELNPDLLQSGKLKLTGTVDRLGRALIVTETKDSKEGFCVEEMARVLA
CYHRITRPAAKEKGLTVLLDSRSSPPSALLLSALKRFQVWLPGGLGSVLVLVEEQQESPS
CNLEGLEVHMVRGTGILQQYVDKQQLPEEMDGDFHHCHSDWLVFRLSLESLTERCEGALC
LLGEALQSMDTAPMPDNIKAVPLSIEKHQQLMMSVLADQRITELQQRGGAWLAGLTNGNS
GLAQKSPDCRVALAVTSELYDGVDDALHNLVRVSNQRGRDLEALGRLAELVDKLEKCDKE
IEQVQSQLEEYKEPPLSLSRLSLKQQKFKTFRETANELHSETLSVLSDLEGWCELDWAGL
SDVQIRLPPVREKLRDMSHCLSDCWTTLDNTQRLLSTLTEATQWCDAVSSSSSTSAPSST
CPLASLPPIPPSRFQDARSLALELGGGALLDLWTQTVERYQRTVAHVKPRFLQSDRGQNQ
GQGKPKTPSASSLWDLMGPEGEADWGLGAGGGDGGLQSWGSLASLFRPQTCSTLKIGEEK
GNRKEGTGGGGGGGAGGAGGGKFLQNLLNPTKKSPTEVPPPSKPPRKRHPSFDLQALLAP
RRGASTPKPAESPVGGPSRNSPMSWLGRRAVADPVITTSMATAISNWGGGGGGGGGGGGV
LIRGVEVSSKEVVDHTGSPRQHVLLGRTEREMGADRAGTTTQSKLYLLWCRMLSSERQYV
AILKGVEETYLPLLELSDTPASIRGKADTLFPNWSSLSSFHSQNLLPAMEGALVQSLLQQ
DCFSKYRDQFLQYSHYIRTKPELDSPIVTQAADFFKSKLSPASPVYPLSFPHCLQAPTQR
LEQYCEALEELGGINPACDSALSILRYTQRHGEDLRASDLIVGCPIPVAERGDLVRQGEL
TVCGGPRRKRAGLRNVFLYQHALIFTKLKSPSPGRTVYSYKQSIKTGEMGLTQDVGEEGV
KFEVWVRHAARTRDCITLQAKDREGKVAWTHDVAHLLWTHAINNTELCLKESLCVGISSK
LLLDASGTQGSELDSIYSLNDRVHSSCSDSSSVGSQKEGGSPASGRDPRRSSGSTTYSQS
QQPSTAV
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggcaatggaggattgcgtgcagggggcgctctcgtcactttatcctccc
tttgagagcacggcgcctcccctcctttcgcaggtcttttcggtcctagagtcaacctat
cagcatgatagtcttcggtacctcctggactactttgttcctgcgaagcaccttctgcat
aaactccagcagcacgcctgttctcagtacctcggctgcttgttccttcactccggctgg
cctctgtgtctgggcgagaaagtggttgtgcaactctctaccctggattggaggcttctg
cgcagtaacgacttctacctgcaggtggtgcccttctcaacacgttgtccccggctggct
ctgaaatgccttgcccccggggggcgtactgttcaggaaatcttggtgcccgagtcacag
catccacttgtgttcaccactgagtggctgcatagtgtcaacaaagaacggggacaccgg
agggaagttggaggtggtcttgatacctgcctggtcagtacatgtgatggagtgctgagg
cttccatggaaagaagtcgtctatccaaagttcattcatgacccttctgaggagctgggc
ctaatgtcatgccacgacgactctgttccaaaccgaatgtccagtgagggagggagtact
gttggaggatggggctgctcatcctctggagagctggactcctggtcctgggatgaggat
gaagatgaaggtttaccaccagacggtttggactcggcacctgcacttcccagtcgaagg
cgaagcgaggatggactcggcaggacagtgaggaactctcaacttgatggggattatgtg
gagctattggagcccagagtgggtcctgatggaggtgttgatacacagcaaaggtacctg
gaaatgcacggaatttgtaagactaagactttacctctgtgcagaagaggcaaaaccatc
aaacttcgaaaggggagaggttggggccaaagtagacttgaaggatctggaagctttcga
gctgttgttggtgccagaagagatacaggaacctcaaaagatgagattttgcgggtacag
cgtgcaccagaacccgatgaacctgtgagagggaggcagtcttgctcctcttctgttcaa
aactcttttgaagaagacacatcaaggaaacattctgagggcctggaaaacccccagatt
tattttgatggtcctgttaaagagaggaggcctggtgtgggcaaagagagagatagcaac
gggctgactaaatgcagagacaatcacaaatgtaacgtctcagagggcagggacagtttg
gtcaaaaatgacgcacatgactcaacaaaccacagagcttgtcacgctagtgagggacat
tcagatcaaggatctcattctgactctgtcttcgatgacacagacaaaccactgagtgga
gacagtgatgccaccacgccaacatcagacactgttgagagaccattcgctgttgtgtca
gaaagtggaatgattgccaacagcgggtcaaaaacaaaaagtctgtcacatccaaatgtg
acaaaagaaagggatcaaggaaagatggagaacagactgtgtcccaggggaaaggaggtc
aaaatggcaggattcagggccccaaggaggaaaaggaagggaaagggggcaagaggaagg
gctaggtctggtggtcgtgcacaccagaagggatcaaaacagcagtataaagcgccgcag
ccgagtcccactaccagctgtgatctgacaaagctgcctataacagggaacgaccaatca
gagcaaagaggaaacgcagacaaacctgatggattgttgccttcaacagatgaggcagag
gatgcaagggcacccagtgcagaagcagagtctttgcctgtctgcaacggtcaatcaggg
acaaccctattcaaccacactgatgaggaagcaaagtctggagagacaagtgccagccaa
acaaacagcattgtctctaaggagcctcctcttttaagggaactgaacccagatctgctc
cagtcaggaaagttaaaattaacaggcactgtcgacaggttgggacgtgctctgattgtc
actgagacgaaagattccaaagaaggtttctgcgtggaggagatggctcgcgtcctggct
tgctaccacagaataacccggcctgcagccaaagagaagggtctcactgtgttactcgac
agcagaagctctcccccctctgcccttcttctctccgcgcttaaacggttccaggtgtgg
cttcccggcggccttggatctgttttagttctggtggaggagcagcaggaatccccatca
tgcaatctggaaggactggaggttcacatggtacgaggaaccggcatccttcagcagtac
gttgacaagcagcagctgcctgaagagatggatggagatttccaccactgtcactcagac
tggcttgtttttagactgagcttggagagcctgacagaacgctgtgagggcgccctctgt
ctgctgggagaagcactgcagtccatggacactgcgccaatgccagacaacatcaaagcc
gttcctctgagcattgaaaaacaccagcagctcatgatgagcgtcctggccgaccagcgg
attactgaactccagcagagaggtggcgcctggctcgcaggactgaccaatggcaactca
ggtcttgcacagaaatcaccagactgcagggtggctcttgctgtgacctctgaactctac
gatggcgtagacgacgccctccataatctcgtccgagtgtccaaccagagaggccgggat
ctggaagccctggggcgactggcggagctggtagacaaactggaaaagtgtgataaagag
attgagcaagtccagtcccagctggaggagtataaggagcctcctttgtccctcagcaga
ctgtcgctaaagcagcagaaattcaagacgttcagagaaacggccaatgagctgcacagt
gagactctgtcagtactcagtgatttggaaggctggtgcgagctagactgggccggcctc
agtgacgtccagatccgactcccccccgtaagggagaagctacgggacatgtcccactgt
ctgtctgactgctggactaccctggataacacacagaggctactgtccacactgaccgag
gccactcagtggtgtgatgcagtctcttcctcctcttccacctctgcaccatcttccacc
tgcccccttgcatccctgccgccaattcccccatctcgtttccaggatgcccgatcctta
gctctagagctcggtggtggggcgctcctagatctctggacccagactgtagagcggtac
caaaggactgttgcgcacgtcaaaccacgattcctccagtctgaccggggccagaatcaa
ggccaagggaagccaaagacaccctctgccagcagtctgtgggacctgatgggtcctgag
ggagaggcagactggggactaggggctggaggtggagatggggggctgcagtcctggggg
tccttagcatccctgttcaggccccagacttgctccacactgaagattggtgaggagaaa
ggcaacaggaaagaaggaacagggggaggtggtgggggaggggctggtggcgctggagga
ggaaagtttctgcagaaccttctgaatcctacaaagaagagtcctacagaagtcccaccc
ccttccaagcctcccaggaaacggcacccaagttttgacctccaggctctcctggctccc
cgcagaggtgcgtcaaccccaaagcccgctgagtcaccagttggtggaccgagccgtaac
tcacccatgtcctggctgggtaggcgcgctgtggctgacccggttatcactaccagcatg
gctacggccatctctaattgggggggaggaggaggaggaggaggtggtggtggtggtgta
ttaattcgaggtgtggaggtcagcagcaaagaggtggtggatcacacggggtcgccccgc
caacatgtgctgctcggaaggactgagagagagatgggggcagaccgggctggaacaacc
acacagagtaagctctacctgctctggtgccggatgctgagctcagagaggcagtacgtg
gccatcctgaagggggtggaagagacgtacctgcccttactggagctctctgatactcct
gcctccatcagagggaaggcggacaccctcttcccaaactggtccagcctcagcagcttt
cattcgcagaacctcctacctgctatggagggcgctcttgtgcagagtctgttgcaacag
gactgctttagcaaatatcgggaccagtttctccagtattcccactacatcaggaccaaa
ccagaactggactcacccatagtcacgcaggctgccgacttcttcaagtccaaactttcc
ccggcttcccccgtctaccctctgtccttcccacactgcctgcaggcccccacacagagg
ctggagcagtactgcgaggccctggaggagctgggaggcataaaccccgcctgtgactcc
gccctctccatcctcagatacacccagcgacacggcgaggacctcagggctagtgacctc
atcgtgggctgtccgattccggtggcggaacgaggtgacttggtgcggcagggggagctg
accgtatgcgggggccctcggaggaaacgggcaggcttgaggaacgtcttcctctaccaa
cacgccctgatcttcaccaaattgaagagtcccagcccaggacgcaccgtctacagctac
aaacagagcatcaagacgggtgaaatgggtctgactcaggatgtgggcgaggagggcgtg
aagtttgaagtgtgggtccggcacgcggctcgaaccagagactgcatcactctgcaggcg
aaggacagggaaggcaaggtggcgtggactcacgacgtcgcacacctgctctggacacac
gccatcaacaacacagaactgtgtctgaaggagtccctctgtgtgggcatttccagtaag
ctgctgctggatgcgtcaggaactcagggttcagagttggattccatctacagccttaat
gacagagtccacagtagctgctcagactcgtcttccgtgggcagtcagaaggaaggggga
tccccggcgtctgggagagatcccagaaggagctctggatccacaacttactcacagagt
cagcaaccttcgacagccgtgtaa
DBGET
integrated database retrieval system
